CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP136_MYCTU (Putative cytochrome P450 136 OS=Mycobacterium tuberculosis GN=cyp136 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 44/134 (32.84%), Postives = 68/134 (50.75%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELS-PSY 405
            G+   D   L  L+ + ++ NE +RL  P     R   ++T+L    LP G  +     M H  PE+W  D + F PERF+E  ++  R++ ++ PF  G   CIG+ F  +E K  L  +L+ +  ELS P Y
Sbjct:  337 GDGPLDIESLEQLESLDLVMNESIRLVTPVQWAMRQTVRDTELLGYYLPKGTNVIAYPGMNHRLPEIW-TDPLTFDPERFTEPRNEHKRHRYAFTPFGGGVHKCIGMVFDQLEIKTILHRLLRRYRLELSRPDY 469          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLA-RAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            D + +  LK ++++  E +RL+ P  +L  R   KET++    +P   ++ + V  +  DP+ W DD   FKPERF +       N   Y PF  G RIC G +F L    + LA +L +F ++L
Sbjct:  344 DENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYW-DDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKL 467          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.167e-13
Identity = 45/138 (32.61%), Postives = 67/138 (48.55%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLA-RAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF--ELSPSYVHAPTAV 426
            +   +N+LK V     EVLRL+PP  +L  R ++++ KL    + AG Q+ +    +  D   WG DA EF+PER  +           Y PF  G R+C G+    V A + LA +++ F +  E  PS    P  V
Sbjct:  343 EVENMNYLKAV---IKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLV 477          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP52V_CANAP (Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 42/131 (32.06%), Postives = 62/131 (47.33%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN---------LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFS 384
            P +  L   K++Q +  EVLRL+P   +  R    +TKL           + +P G  +      +    ++WG DA  F+P+R++E    +      Y PF  GPRIC+G  FAL EA   +  I Q FS
Sbjct:  354 PTFEQLKQCKVLQNVIREVLRLHPNVPLNFRQAIVDTKLPTGGGPNGDQPVFVPKGQNVFYSTYSMQRRTDIWGPDATTFRPDRWNEPREALASGW-DYIPFNGGPRICLGQQFALTEASYTIVRICQEFS 483          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP135_DROME (Probable cytochrome P450 313a5 OS=Drosophila melanogaster GN=Cyp313a5 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            G  +  +  L  L  +  + +E +RL P   +L R  +   +L N   +P GV + + +   H + ++WG  A  F P+ F    +K  R   SY PF+ G + C+G   +L+ AK+ALA IL+N+
Sbjct:  330 GEFEASHADLEKLVKLDRVLHETMRLIPAVPLLIRQTSHSIQLSNGFYIPEGVTLMIDIFHTHRNKDIWGPQANAFNPDNFLPE-NKRARPPYSYLPFSKGKKTCLGWKLSLISAKLALAKILRNY 454          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP133_DROME (Probable cytochrome P450 313a3 OS=Drosophila melanogaster GN=Cyp313a3 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 41/136 (30.15%), Postives = 69/136 (50.74%), Query Frame = 1
Query:    1 VFGNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSY 405
            V G+ +  Y  L  +  ++ + NE LRL P      R   ++ +L + +++P GV I + +   H + + WG D   F P+ F     +  R+  +Y PF+ G R CIG  + L+ +K+AL+ IL+N     S  Y
Sbjct:  333 VAGDFEVTYDDLQRMVFLERVVNETLRLIPSVPFTPRETIRDFRLSSGVVIPKGVGIGIDIFATHRNRDHWGTDPSSFNPDHFLPDNVR-DRHPYAYIPFSKGRRNCIGWKYGLMSSKLALSKILRNCKVSTSFRY 467          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 37/120 (30.83%), Postives = 61/120 (50.83%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            L  L  ++ +  E LRL+PP+ ++ R     T +    +P   ++ +    +  DP+ W D A  F PERF++       N   Y PF  G R+C G+ F L    + LA++L +F++EL
Sbjct:  351 LEELSYLKSVIKETLRLHPPSQLIPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSD-ADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWEL 469          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 36/141 (25.53%), Postives = 69/141 (48.94%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAV 426
            GN+      +  +  ++ +  E +RL+PP  +M+     ++ +LG+  +PAG Q+ +    +  +   WG DA +F+PER          +     PF  G RIC  ++FA++  ++ LA ++  + + L   Y+   T V
Sbjct:  328 GNSSVSEDDIKDMNYLKAVIKETMRLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNV 468          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 1
Query:   43 LKIVQMIFNEVLRLYPPAVMLA-RAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            +  +Q +  E LRL PPA +L  R ++++ KL    +PAG Q+ +    +  D   WG DA EFKPER  +           + PF  G RIC G+ F      + LA I++ F++ +
Sbjct:  348 MNYLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRM 465          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13
Identity = 38/121 (31.40%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVM-LARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            + ++K ++ +  EVLRL+P   M L R ++++ K+    + AG ++ +    +  D  +WG DA EFKPER  +         ++Y PF  G RIC G+N AL  A++ +A ++  F + +
Sbjct:  344 VENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDTAIWGPDAEEFKPERHLDSGLDYHGKNLNYIPFGSGRRICPGINLALGLAEVTVANLVGRFDWRV 464          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CP136_MYCTU7.167e-1332.84Putative cytochrome P450 136 OS=Mycobacterium tube... [more]
C71D6_SOLCH7.167e-1332.80Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71AG_ARATH7.167e-1332.61Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
CP52V_CANAP9.361e-1332.06Cytochrome P450 52E1 OS=Candida apicola GN=CYP52E1... [more]
CP135_DROME9.361e-1330.95Probable cytochrome P450 313a5 OS=Drosophila melan... [more]
CP133_DROME9.361e-1330.15Probable cytochrome P450 313a3 OS=Drosophila melan... [more]
C71D8_SOYBN9.361e-1330.83Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71AM_ARATH9.361e-1325.53Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH9.361e-1333.05Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH9.361e-1331.40Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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