CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C525A_DICDI (Probable cytochrome P450 525A1 OS=Dictyostelium discoideum GN=cyp525a1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = 1
Query:    4 FGNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAV----------NKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF--SFELSPSYVHAPTAVLTLHPEFGTHLILRK 471
            F     DY  +  L     +  E LRL+PPA M+ R            N      N+ +P+   I + V  +H DP+LW D  I F P R+ + I  +  N+  + PF+ G R+C+G  F++VEA+I ++ ++ NF  SF    S         TL P++   L  +K
Sbjct:  436 FTEEDEDYQSIEFL---DWVIYETLRLFPPAPMIGRTSKNDDILKSGNNNNNNNNNISIPSETLILISVYAIHRDPKLWKDPNI-FNPYRW-KNIENIN-NRSDFIPFSSGGRVCVGQKFSIVEARIIISKLILNFELSFNNLKSKPFKIYQRATLTPKYPVFLNFKK 597          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4V3_RAT (Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 41/119 (34.45%), Postives = 66/119 (55.46%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFE 390
            L  LK +  +  E LR++P   + AR+++++ ++    +  G +  +    +H DP  + D   EF+PERF    S+  R+  +Y PF+ GPR CIG  FA++E K  LA IL+ F  E
Sbjct:  375 LKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEVAGYKISKGTEAVIIPYALHRDPRYFPDPE-EFQPERFFPENSQ-GRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILREFWIE 491          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGD----DAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            ++  L  L  + M   E LRL+PP  +++R   ++  L +   +P G+   + +  +HH+P +W D    D   F PE   +       + +++ PF+ GPR CIG  FA+ E K+ALA+ L  F
Sbjct:  371 EWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYDPFRFDPENIKDS------SPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12
Identity = 39/133 (29.32%), Postives = 71/133 (53.38%), Query Frame = 1
Query:    1 VFGNNKPD---YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFE 390
            +FG++K        L  ++ ++    + LRL+P   M+AR V ++  +G  I+PAG Q  +    +H +P ++     +F P+ F    +   R+  +Y PF+ GPR CIG  FA++E K  ++ +L+ +  E
Sbjct:  375 IFGDDKETPATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPE-QFNPDNFLPE-NCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIE 505          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 53/152 (34.87%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKL-----GNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAV-LTLHPEFGTHLILRK 471
            L  LK ++ +  E LR+YPP  ++ R +  + K      G+ ++PAG +I + +  VH  PE + +   EF PER   G S+V   ++   PF+ GPR CIG  FA +E K+ LA I++   +EL P        V + L  E G  L +RK
Sbjct:  314 LGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPD-EFIPERHENG-SRVAPFKM--IPFSAGPRNCIGQKFAQLEMKMMLAKIVR--EYELLPMGQRVECIVNIVLRSETGFQLGMRK 459          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP17A_RAT (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus norvegicus GN=Cyp17a1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12
Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLA-RAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSE--GISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELS 396
            P ++  +HL +++    EVLR+ P A ML     N ++ +G   +P    + + +  +HHD   W D   +F PERF +  G   +T  Q SY PF  GPR CIG   A  E  +  A++LQ F  ++S
Sbjct:  341 PTFNDRSHLLMLEATIREVLRIRPVAPMLIPHKANVDSSIGEFTVPKDTHVVVNLWALHHDENEW-DQPDQFMPERFLDPTGSHLITPTQ-SYLPFGAGPRSCIGEALARQELFVFTALLLQRFDLDVS 467          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP6K1_BLAGE (Cytochrome P450 6k1 OS=Blattella germanica GN=CYP6K1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 42/126 (33.33%), Postives = 66/126 (52.38%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLG--NLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            N KP Y  +  +  + M+ +E LR YPP  +L R   ++ K+   +LI+     + + ++ +H DP+ + +    + PERFSE  +K  R   +Y PF  GP  CIGL F  +  K AL  +L  F
Sbjct:  362 NGKPTYEDVFGMPYLHMVVSETLRKYPPLPLLDRVCLQDYKVPGTDLIIERDTPVFIALLGLHRDPQYYPNPE-RYDPERFSEE-NKRQRKAYTYLPFGEGPHNCIGLRFGYMAVKTALVHMLAEF 485          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4F1_RAT (Cytochrome P450 4F1 OS=Rattus norvegicus GN=Cyp4f1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.557e-12
Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            ++  L  L  + M   E LRL+PP  +++R   ++  L +   +P G+   + +  +HH+P +W D  + + P RF     K + + +++ PF+ GPR CIG  FA+ E K+ALA+ L  F
Sbjct:  371 EWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEV-YNPFRFDPENIKDS-SPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF 489          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP52W_CANAP (Cytochrome P450 52E2 OS=Candida apicola GN=CYP52E2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 40/131 (30.53%), Postives = 62/131 (47.33%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN---------LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFS 384
            P +  L   K++Q +  EVLRL+P   +  R    +T             + +P G ++     ++  +  +WG D+  F+P+R++E    +      Y PF  GPRIC+G  FAL EA   L  I Q FS
Sbjct:  354 PTFEQLKQCKVLQNVIREVLRLHPNVPLNFREAIADTTFPTGGGPNGDQPIFVPKGQKVFYATYVMQRNAGIWGPDSTSFRPDRWNEPREALASGW-DYIPFNGGPRICLGQQFALTEASYTLVRICQEFS 483          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 38/120 (31.67%), Postives = 63/120 (52.50%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFE 390
            L+ LK +Q +  E LRL+PP  ++L R   ++ K+    +P+  ++ +    +  DP  W +   +F P+RF E       N   Y PF  G RIC G+ FAL   ++ LA +L +F ++
Sbjct:  342 LHQLKYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPE-KFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQ 460          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
C525A_DICDI1.597e-1230.36Probable cytochrome P450 525A1 OS=Dictyostelium di... [more]
CP4V3_RAT2.085e-1234.45Cytochrome P450 4V3 OS=Rattus norvegicus GN=Cyp4v3... [more]
CP4FE_MOUSE2.085e-1231.20Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]
CP4C3_DROME2.085e-1229.32Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]
CP4D8_DROME2.724e-1234.87Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]
CP17A_RAT2.724e-1234.11Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus... [more]
CP6K1_BLAGE3.557e-1233.33Cytochrome P450 6k1 OS=Blattella germanica GN=CYP6... [more]
CP4F1_RAT3.557e-1232.23Cytochrome P450 4F1 OS=Rattus norvegicus GN=Cyp4f1... [more]
CP52W_CANAP4.646e-1230.53Cytochrome P450 52E2 OS=Candida apicola GN=CYP52E2... [more]
C71DC_CATRO4.646e-1231.67Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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