CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP17A_CAVPO (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia porcellus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11
Identity = 43/148 (29.05%), Postives = 70/148 (47.30%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGI-SKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELS-----PSYVHAPTAVLTLHP 441
            P +   NHL +++    EVLR+ P A +++    N ++ +G   +     + + +  +HH+ + W D   +F PERF +   S++     SY PF  GPR C+G   A  E  +  A +LQ F  E+      PS    P  V  + P
Sbjct:  342 PTFSDRNHLLMLEATIREVLRIRPVAPILIPHKANTDSSIGEFAIDKDTNVLVNLWALHHNEQEW-DRPDQFMPERFLDPTGSQIIVPSSSYLPFGAGPRSCVGEALARQEIFLITAWLLQKFDLEVPEGGQLPSLEGIPKIVFLIDP 488          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP310_DROME (Probable cytochrome P450 310a1 OS=Drosophila melanogaster GN=Cyp310a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 44/141 (31.21%), Postives = 71/141 (50.35%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKV------TRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYV 408
            N +  +  LN L+ + M   E LR YPP  ++ R   K   L N    +  G  + +P++ +H D E +  + +++KP RF +  + V      T++ V +  F  G   C+G NFA +  K+AL  +LQNF  EL  + V
Sbjct:  320 NGQLKFEELNGLRYMDMCLKETLRKYPPLPIIERVCRKSYSLPNSKFTIDEGKTLMVPLLAMHRD-EKYFSEPMKYKPLRFLQTANDVGQCEDKTKSNV-FIGFGIGGSQCVGQNFAKLVIKVALIKLLQNFHLELDANQV 458          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLA-RAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGI-SKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            P ++  NHL +++    EVLR+ P A ML     N ++ +G   +P    + + +  +HH+ + W D    F PERF +   S +    +SY PF  GPR CIG   A     + +A +LQ F  ++
Sbjct:  340 PTFNDRNHLLMLEATIREVLRIRPVAPMLIPHKANIDSSIGEFTIPKDTHVVINLWALHHNEKEW-DQPDRFMPERFLDATGSHLITPSLSYLPFGAGPRACIGEVLARQVLFLYVACLLQRFDLDV 465          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 41/129 (31.78%), Postives = 61/129 (47.29%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            N K +   + +L  +Q +  E LRL+PP   ++ R   ++TK     +P   Q+ +    +  DPE W DD + FKPERF      V        PF  G R+C+GL         AL  +L+ F +EL
Sbjct:  346 NRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECW-DDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWEL 473          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            L  +K ++ +  E LRL+PP  +M+      + KL +  +PAG  + +    +  +   WG DA EF+PER                PF  G RIC  ++FA+V  ++ LA ++  F + L
Sbjct:  338 LQDMKYLKAVIKETLRLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTL 458          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 36/130 (27.69%), Postives = 66/130 (50.77%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVN-KETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            GN       + ++  ++ +  E  RL+PP  +LA   + ++  LG+  +PAG Q+ +    +  +   WG DA +F+PER  +       +     PF  G RIC  ++FA+V  ++ALA  +  + ++L
Sbjct:  328 GNLSVSEEDIQNMSYLKAVIKETTRLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKL 457          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C4D14_DROME (Probable cytochrome P450 4d14 OS=Drosophila melanogaster GN=Cyp4d14 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11
Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            L  LK ++ +  E LRL+P   ++ R ++++T L   ++PA   + + +     DP+ + D   +F P+RFS    K   +  +Y PF+ GPR CIG  FA++E K  ++ ++++  FEL P
Sbjct:  362 LGELKYLECVIKESLRLFPSVPIIGRYISQDTVLDGKLIPADSNVIILIYHAQRDPDYFPDPE-KFIPDRFSME-RKGEISPFAYTPFSAGPRNCIGQKFAMLEMKSTISKMVRH--FELLP 479          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP11A_DASAM (Cholesterol side-chain cleavage enzyme, mitochondrial (Fragment) OS=Dasyatis americana GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11
Identity = 37/122 (30.33%), Postives = 66/122 (54.10%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            L  + +++ +  E LRLYP A+ + R +N++T L N  +PAG  + L +  +  +P+++ +   ++ PER+ +G     R    +  F +GPR CIG   A  +  + +  +LQNF  E  P
Sbjct:  372 LKSVPLLKCVVKETLRLYPVAISIQRYLNEDTVLQNYHIPAGTLVQLGLYAMGRNPKIFKNPE-QYNPERWLKGEDTHFR----HLGFGFGPRQCIGRRIAETQMVLLMIHMLQNFKIETDP 488          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CP17A_CAVPO5.136e-1129.05Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia ... [more]
CP310_DROME6.708e-1131.21Probable cytochrome P450 310a1 OS=Drosophila melan... [more]
CP17A_PERLE6.708e-1131.50Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]
C76A2_SOLME6.708e-1131.78Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71AO_ARATH6.708e-1129.75Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AL_ARATH6.708e-1127.69Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C4D14_DROME6.708e-1131.97Probable cytochrome P450 4d14 OS=Drosophila melano... [more]
CP11A_DASAM8.761e-1130.33Cholesterol side-chain cleavage enzyme, mitochondr... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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