CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-17
Identity = 51/149 (34.23%), Postives = 80/149 (53.69%), Query Frame = 1
Query:    1 VFGNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLI-LPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPE 444
            V  ++ P+Y  +  LK ++M+ NE LRLYP A   +    ++T LG    +  G  +++ +  +H D   WG DA +F+PERF E  S +  +  +Y PF  G R CIG+ FAL EA + L ++L++F       Y       LT+ P+
Sbjct:  300 VLTDDTPEYKQIQQLKYIRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPISKGQPVTVLIPKLHRDQNAWGPDAEDFRPERF-EDPSSIPHH--AYKPFGNGQRACIGMQFALQEATMVLGLVLKHFELINHTGYELKIKEALTIKPD 445          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17
Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF 387
            P Y  +  ++ + M+ NE LRLYP    + R   K+ ++  +  P G  + +P   +H D + W +   EF+PERFS+  +K   +   Y PF  GPR CIG+  AL+  K+AL  +LQNFSF
Sbjct:  345 PTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPD-EFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF 465          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP3AF_CAVPO (Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17
Identity = 47/123 (38.21%), Postives = 69/123 (56.10%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF 387
            P Y  +  ++ + M+ NE LRLYP A  + R   K+ ++  +  P G  + +P   +H D + W  +  EF+PERFS+  +K   +   Y PF  GPR CIG   AL+  K+AL  +LQNFSF
Sbjct:  345 PTYDVMMEMEYLDMVVNETLRLYPVANRIERMSKKDFEINGMSFPKGTLVMIPSFALHRDSKYW-PEPDEFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGRRMALMNLKLALIRLLQNFSF 465          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP3AE_CAVPO (Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17
Identity = 46/123 (37.40%), Postives = 69/123 (56.10%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF 387
            P Y  +  ++ + M+ NE LRLYP    + R   K+ ++  +  P G  + +P   +H D + W +   EF+PERFS+  +K   +   Y PF  GPR CIG+  AL+  K+AL  +LQNFSF
Sbjct:  345 PTYDVMMEMEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPD-EFRPERFSKK-NKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF 465          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C13A8_CAEEL (Putative cytochrome P450 CYP13A8 OS=Caenorhabditis elegans GN=cyp-13A8 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17
Identity = 47/128 (36.72%), Postives = 75/128 (58.59%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVML-ARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFE 390
            N++  +  L+ LK +  +  E LRL+P A    +R   + T +G  I+ AGV + +    +HHD  +WG+D  EFKPER+   ++     Q +Y  F  GPR+C+G+ FAL+E K  L+ IL+ ++FE
Sbjct:  356 NDEITFDQLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTVIGEQIVEAGVDVMIDTWTLHHDKNVWGNDVEEFKPERWDSPLTP----QQAYLSFGAGPRVCLGMRFALLEQKGLLSHILKKYTFE 479          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.153e-17
Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 VFGNNKPDYHGLNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF 381
            V G+    Y  +  LK +  +  E LRLYP A    +R   K T LG++ +  GV+I   V+ +H   E+WG++A +F PER+ E  S   R+ +S+ PF  GPR C+G+   L EAK ALA +L+ +
Sbjct:  353 VVGSENVSYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLEPSS---RHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRY 477          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C13A3_CAEEL (Putative cytochrome P450 CYP13A3 OS=Caenorhabditis elegans GN=cyp-13A3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.812e-17
Identity = 46/120 (38.33%), Postives = 69/120 (57.50%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFE 390
            L+ LK ++ +  E LRLYP A ++  R   K T +  + +  G  +      +H+DP+ WG++A EFKPER+  G  +      +Y PF  GPRICIG+  A +E K+ LA IL+ +S E
Sbjct:  370 LSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLGMKIEEGTNVQADTWTLHYDPKFWGENANEFKPERWESGDEQAVAKG-AYLPFGLGPRICIGMRLAYMEEKMLLAQILKKYSLE 488          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4A5_RABIT (Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CYP4A5 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17
Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E +RLYPP   ++R ++      +   LP G  ++L +  +HH+P +W +  + F P RF+ G +   R+  ++ PF+ G R CIG  FA+ E K+A+A+ L  F     P+ +  PTA L L    G HL LRKL
Sbjct:  367 LDQMPYTTMCIKEAMRLYPPVPAISRDLSSPVTFPDGRSLPKGFTVTLSIYGLHHNPNVWPNPEV-FDPGRFTPGSA---RHSHAFLPFSGGARNCIGKQFAMNELKVAVALTLVRFELLPDPTRIPKPTARLVLKSNNGIHLRLRKL 510          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP134_DROME (Probable cytochrome P450 313a4 OS=Drosophila melanogaster GN=Cyp313a4 PE=2 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17
Identity = 43/131 (32.82%), Postives = 76/131 (58.02%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELS 396
            G+    Y     +  + +I NE +R+ PP  +++R  +++ KL N +++P GVQI++ +  +H   ++WG DA  F P+ F     +  ++  +Y PF  G R CIG  +AL+ AK+ LA +L+N+ F+ S
Sbjct:  337 GDFDVSYADTQQMVYLDLILNESMRVIPPVPVVSRQTSQDLKLSNGIVVPKGVQIAIDIYHMHRSKKIWGPDAETFNPDHFLPHNIQ-DKHPYAYIPFTKGIRNCIGWRYALISAKVTLAKLLRNYRFKTS 466          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17
Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 1
Query:    4 FGNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERF-SEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSY 405
            FG   PD   L++L   + +  E LRL P   + AR    + +L N +++P GV I + +   H +PE+WG DA  F P+ F +E + +  ++  +Y PFA G R CIG  +A++ +K AL  IL+N+    S  Y
Sbjct:  337 FGITYPDMQKLDYL---ERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQ--KHPYAYIPFARGKRNCIGSKYAMMSSKFALCRILRNYKISTSTLY 467          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CYPE_BACSU1.262e-1734.23Probable bifunctional P-450/NADPH-P450 reductase 2... [more]
CP3AH_CAVPO1.649e-1737.40Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]
CP3AF_CAVPO1.649e-1738.21Cytochrome P450 3A15 OS=Cavia porcellus GN=CYP3A15... [more]
CP3AE_CAVPO1.649e-1737.40Cytochrome P450 3A14 OS=Cavia porcellus GN=CYP3A14... [more]
C13A8_CAEEL1.649e-1736.72Putative cytochrome P450 CYP13A8 OS=Caenorhabditis... [more]
C13B1_CAEEL2.153e-1738.28Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
C13A3_CAEEL2.812e-1738.33Putative cytochrome P450 CYP13A3 OS=Caenorhabditis... [more]
CP4A5_RABIT3.673e-1734.46Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CY... [more]
CP134_DROME8.182e-1732.82Probable cytochrome P450 313a4 OS=Drosophila melan... [more]
CP131_DROME8.182e-1735.29Probable cytochrome P450 313a1 OS=Drosophila melan... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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