CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 59/188 (31.38%), Postives = 90/188 (47.87%), Query Frame = 1
Query:    1 VFGNNKPDYHGLNHLKIVQMIFNEVLRLYP-PAVMLARAVNKETKLGN-------LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERF-----------------SEGISKVTRNQV----SYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL--SPSYVHAPTAVLTLHPEFGTHLILRK 471
            V G  +P +  L  L+ +++I  E LRLYP P +++ R++  +   G          +PAG  + + V  +H  P  W D   +F+PERF                 S     +  N+V    ++ PF  GPR C+G  FAL+E+ +AL M+LQNF  EL  +P  V   T   T+H + G    L+K
Sbjct:  386 VLGTGRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFW-DRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGA-TIHTKNGMWCRLKK 571          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C6A19_DROME (Probable cytochrome P450 6a19 OS=Drosophila melanogaster GN=Cyp6a19 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16
Identity = 56/163 (34.36%), Postives = 81/163 (49.69%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAV------LTLHPEFGTHLILRKL 474
            N K +Y  +  L  ++ + NE LR +P    LAR   K  +  N    + AG  + +  + +HHDPE + +   +F PERF E   K  R   ++ PF  GPR CIGL F  ++  I LA+++ NF FEL P     P  +      L L  E G HL + K+
Sbjct:  343 NGKLEYDSMQDLFYMEKVINESLRKHPVVAHLARIATKPYQHSNPKYFIEAGTGVLVSTLGIHHDPEFYPEPE-KFIPERFDEEQVK-KRPTCAFLPFGAGPRNCIGLRFGRMQVIIGLALLIHNFRFELHPK---TPVPMKYTINNLLLGSEGGIHLNITKV 500          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: THAS_BOVIN (Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 46/128 (35.94%), Postives = 67/128 (52.34%), Query Frame = 1
Query:   19 PDYHGLNH-LKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            P+Y  L   L  + M+  E LR+YPPA    R   ++ ++    +PAG  +   V  +H+DPE W +    F PERF+    +  R   +Y PF  GPR C+G+   L+E K+ L  IL+ F FE  P
Sbjct:  381 PEYCSLQEGLPYLDMVIKETLRMYPPAFRFTRVAAQDCEVLGQRIPAGAVLETAVGALHYDPEHWPNPE-NFNPERFTAEAQQ-RRRPYTYLPFGAGPRSCLGVRLGLLELKLTLLHILRKFRFEACP 506          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 51/148 (34.46%), Postives = 83/148 (56.08%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E LRL PP   ++R ++K   L +   LPAG+ + L +  +HH+P +W D  + F P RF++  S+  R+  ++ PF+ GPR CIG  FA++E K+A+A+ L  F      +   A ++   L P+ G +L L+KL
Sbjct:  359 LDEIPYTTMCIKETLRLIPPIPSISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKV-FDPLRFTKENSE-QRHPCAFLPFSSGPRNCIGQQFAMLELKVAIALTLLRFRVAADLTRPPAFSSHTVLRPKHGIYLHLKKL 504          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16
Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 1
Query:   25 YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            ++ L+ +    M   E LRLYPP   + R ++      +   LP G+ + L +  +HH+P++W +  + F P RF+ G ++ +    ++ PF+ G R CIG  FA+ E K+A A+ L  F     P+ +  P A L L  + G HL LR+L
Sbjct:  363 WNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEV-FDPFRFAPGSAQHSH---AFLPFSGGSRNCIGKQFAMNELKVATALTLLRFELLPDPTRIPIPIARLVLKSKNGIHLRLRRL 509          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E LRLYPP   ++R ++      +   +P G+  ++ +  +HH+P  W +  + F P RFS       R+  +Y PF+ G R CIG  FA+ E K+A+A+ L  F     P+ +  P A L L  + G HL L+KL
Sbjct:  363 LDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKV-FDPSRFSPDSP---RHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMARLVLKSKNGIHLRLKKL 506          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.181e-15
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E LRLYPP   + R ++      +   LP G+Q++L +  +HH+P++W +  + F P RF+       R+  S+ PF+ G R CIG  FA+ E K+ +A+ L  F     P+ V  P   L L  + G +L L+KL
Sbjct:  365 LDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEV-FDPSRFAPDSP---RHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLPDPTKVPIPLPRLVLKSKNGIYLYLKKL 508          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP56_YEAST (Cytochrome P450-DIT2 OS=Saccharomyces cerevisiae GN=DIT2 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPP-AVMLARAVNKETKLG-NLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGIS------KVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHP 441
            N   D  GL  L ++     EV+R+YPP + ++ R   K  KLG  +++P GV +        HDP+ WG  A +FKPER+   I       ++ +N+ +   F  G R C+G   AL E +I+LA +L+ F + L P +    T    L P
Sbjct:  325 NGITDPKGLADLPLLNAFLFEVVRMYPPLSTIINRCTTKTCKLGAEIVIPKGVYVGYNNFGTSHDPKTWGTTADDFKPERWGSDIETIRKNWRMAKNRCAVTGFHGGRRACLGEKLALTEMRISLAEMLKQFRWSLDPEWEEKLTPAGPLCP 476          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 55/149 (36.91%), Postives = 76/149 (51.01%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKE-TKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFS-EGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L  +  + M   E  RLYPP   + R ++K  T +    LPAG  IS+ +  +H +  +W D  + F   RFS E  SK  R+  ++ PF+ GPR CIG  FA+ E K+  AM L  F F L PS +      L L  + G HL L+ L
Sbjct:  360 LGKMTYLTMCIKESFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVWPDPEV-FDSLRFSTENASK--RHPFAFMPFSAGPRNCIGQQFAMSEMKVVTAMCLLRFEFSLDPSRLPIKMPQLVLRSKNGFHLHLKPL 505          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 51/148 (34.46%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E LRLYPP   + R ++      +   LP GV ++L +  +HH+P++W +  + F P  F+ G +   R+  ++ PF+ GPR CIG  FA+ E K+A+A+ L  F     P  V      L L    G HL LRKL
Sbjct:  366 LDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEV-FDPFPFAPGSA---RHSHAFLPFSGGPRNCIGKQFAMNELKVAVALTLVRFELLPDPKRVPDQKPRLVLKSSNGIHLRLRKL 509          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
C97B2_SOYBN5.303e-1631.38Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
C6A19_DROME5.303e-1634.36Probable cytochrome P450 6a19 OS=Drosophila melano... [more]
THAS_BOVIN6.926e-1635.94Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=... [more]
CP4X1_RAT6.926e-1634.46Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
CP4AB_HUMAN9.046e-1632.45Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP4AE_RAT1.181e-1533.11Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4AA_RAT1.181e-1533.11Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
CP56_YEAST2.015e-1532.89Cytochrome P450-DIT2 OS=Saccharomyces cerevisiae G... [more]
CP4B1_HUMAN2.015e-1536.91Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
CP4A6_RABIT2.015e-1534.46Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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