CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15
Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKL--GNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELS 396
            N K  Y  +  +  +  +  E LR YP    L R   KE ++   NLIL  G +I +PV  +HHDPEL+ D   +F P RF     K  R+  +Y PF  GPR CIG  F  ++ K+ L  +L++F F  S
Sbjct:  333 NQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPE-KFDPSRFEPEEIKA-RHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLRDFKFSRS 461          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: THAS_RAT (Thromboxane-A synthase OS=Rattus norvegicus GN=Tbxas1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 1
Query:   19 PDYHGLNH-LKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            P+Y  L   L  + M+  E LR+YPPA    R   ++ ++    +PAG  + + V  +HHDPE W +    F PERF+   +++ +   +Y PF  GPR C+G+   L+  K+ L  +L  F FE  P
Sbjct:  381 PEYCNLQEGLPYLDMVVAETLRMYPPAFRFTREAAQDCEVLGQHIPAGSVLEIAVGALHHDPEHWPNPE-TFDPERFT-AEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACP 506          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: THAS_PIG (Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 42/119 (35.29%), Postives = 65/119 (54.62%), Query Frame = 1
Query:   43 LKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            L  + M+ +E LR+YPPA    R   ++ ++    +PAG  + + V  +HHDP+ W      F PERF+    ++ +   +Y PF  GPR C+G+   L+E K+ L  IL+ F FE  P
Sbjct:  391 LPYLDMVLSETLRMYPPAFRFTREAARDCEVLGQRIPAGTVLEVAVGALHHDPKHWPHPE-TFDPERFTAEAQRL-QQPFTYLPFGAGPRSCLGVQLGLLEIKLTLLHILRKFRFEACP 507          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 41/123 (33.33%), Postives = 69/123 (56.10%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF 387
            P    LN++  ++ +  E LRL+P  +   R  +++ +LG   +PAG  I   V  +H +PE++ +    F P+ F      V R+  +Y PF+ GPR CIG  FAL+E K+ L+ +L+++ F
Sbjct:  350 PTMADLNNMNYLERVIKESLRLHPSVIYFVREAHQDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRC-FNPDNFLPD-RVVNRHPYAYIPFSAGPRNCIGQRFALLEEKVVLSYLLRHYRF 470          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4B1_MOUSE (Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 52/148 (35.14%), Postives = 74/148 (50.00%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKE-TKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L  +  + M   E  RLYPP   + R ++K  T +    LPAG  ISL +  +H +  +W D  + F P RFS   +   R+  ++ PF+ GPR CIG  FA+ E K+  A+ L  F F   PS +      L L  + G HL L+ L
Sbjct:  360 LAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEV-FDPLRFSPE-NMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKVPQLILRSKNGIHLYLKPL 505          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4AM_HUMAN (Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.632e-15
Identity = 48/151 (31.79%), Postives = 80/151 (52.98%), Query Frame = 1
Query:   25 YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            ++ L+ +    M   E LRLYPP   + R ++      +   LP G+ + L +  +HH+P++W +  + F P RF+ G ++ +    ++ PF+ G R CIG  FA+ + K+A A+ L  F     P+ +  P A L L  + G HL LR+L
Sbjct:  363 WNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNLEV-FDPSRFAPGSAQHSH---AFLPFSGGSRNCIGKQFAMNQLKVARALTLLRFELLPDPTRIPIPMARLVLKSKNGIHLRLRRL 509          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: THAS_MACFA (Thromboxane-A synthase OS=Macaca fascicularis GN=TBXAS1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 1
Query:   19 PDYHGLNH-LKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            P++  L   L  + M+  E LR+YPPA    R   ++ ++    +PAG  + + V  +HHDPE W      F PERF+    +  R   +Y PF  GPR C+G+   L+E K+ L  +L  F F+  P
Sbjct:  381 PEFCSLEEGLPYLDMVIAETLRMYPPAFRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPE-TFNPERFTAEAQQQHR-PFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFQFQACP 506          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CYPD_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 1 OS=Bacillus subtilis GN=cypD PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 1
Query:   19 PDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLI-LPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQV---SYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHP 441
            P Y  +  L  ++MI NE LRL+P A   +    ++T +G    +    +IS+ +  +H D + WG DA EF+PERF        ++QV   +Y PF  G R CIG+ FAL EA + L MIL+ F+     +Y       LTL P
Sbjct:  306 PTYKQVLELTYIRMILNESLRLWPTAPAFSLYPKEDTVIGGKFPITTNDRISVLIPQLHRDRDAWGKDAEEFRPERFEH------QDQVPHHAYKPFGNGQRACIGMQFALHEATLVLGMILKYFTLIDHENYELDIKQTLTLKP 444          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            G    D   +  LK ++ +  E LRL+PP  ++ R   +E ++    +PA  +I + V  +  DP+ W +D   F+PERF E       N   + PF  G RIC GL+F L   +I LA +L +F ++L
Sbjct:  334 GKTVVDLSEVQELKYLRSVLKETLRLHPPFPLIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYW-EDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKL 461          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.437e-15
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            G    D   +  LK ++ +  E LRL+PP  ++ R   +E ++    +PA  +I + V  +  DP+ W +D   F+PERF E       N   + PF  G RIC GL+F L   +I LA +L +F ++L
Sbjct:  334 GKTVVDLSEVQELKYLRSVLKETLRLHPPFPLIPRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYW-EDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKL 461          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
C6A13_DROME2.015e-1537.40Probable cytochrome P450 6a13 OS=Drosophila melano... [more]
THAS_RAT2.632e-1534.38Thromboxane-A synthase OS=Rattus norvegicus GN=Tbx... [more]
THAS_PIG2.632e-1535.29Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=... [more]
CP4CU_BLAGE2.632e-1533.33Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
CP4B1_MOUSE2.632e-1535.14Cytochrome P450 4B1 OS=Mus musculus GN=Cyp4b1 PE=1... [more]
CP4AM_HUMAN2.632e-1531.79Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE... [more]
THAS_MACFA3.437e-1534.38Thromboxane-A synthase OS=Macaca fascicularis GN=T... [more]
CYPD_BACSU3.437e-1536.55Probable bifunctional P-450/NADPH-P450 reductase 1... [more]
C71DI_MENSP3.437e-1533.33Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR3.437e-1533.33Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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