CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP6A8_DROME (Cytochrome P450 6a8 OS=Drosophila melanogaster GN=Cyp6a8 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 46/124 (37.10%), Postives = 68/124 (54.84%), Query Frame = 1
Query:   25 YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLG---NLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF 387
            Y     LK +  + +E LRLY     L R   K   +    N ++ AG  + +P   +HHDP ++  +  EF+PERFS   S   R  V++ PF  GPR CIGL F  ++A+I LA++++NF F
Sbjct:  353 YECTKDLKYLNQVLDETLRLYTIVPNLDRMAAKRYVVPGHPNFVIEAGQSVIIPSSAIHHDPSIY-PEPFEFRPERFSPEES-AGRPSVAWLPFGDGPRNCIGLRFGQMQARIGLALLIRNFKF 474          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 47/148 (31.76%), Postives = 74/148 (50.00%), Query Frame = 1
Query:    1 VFGNNKP---DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTL 435
            V GN+K     Y  LN L  V +   E LR+YP   +L R V ++ ++   ++PAG  I +  + +    EL+ +    FKPERF    +    N  +Y PF+ GPR CIG  FA++E K  +A +L+++  +        P  +  L
Sbjct:  349 VVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 47/148 (31.76%), Postives = 74/148 (50.00%), Query Frame = 1
Query:    1 VFGNNKP---DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTL 435
            V GN+K     Y  LN L  V +   E LR+YP   +L R V ++ ++   ++PAG  I +  + +    EL+ +    FKPERF    +    N  +Y PF+ GPR CIG  FA++E K  +A +L+++  +        P  +  L
Sbjct:  349 VVGNDKSTPVSYELLNQLHYVDLCVKETLRMYPSVPLLGRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPN-SFKPERFDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAEL 495          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4B1_RABIT (Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CYP4B1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 51/151 (33.77%), Postives = 75/151 (49.67%), Query Frame = 1
Query:   25 YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETK-LGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            +  L  +  + M   E  RLYPP   + R ++K    +    LPAG  ISL +  +H + ++W D  + F P RFS   S   R+  ++ PF+ GPR CIG  FA+ E K+  A+ L  F F + P  +      L L  + G HL L+ L
Sbjct:  352 WEDLAKMTYLTMCMKECFRLYPPVPQVYRQLSKPVSFVDGRSLPAGSLISLHIYALHRNSDVWPDPEV-FDPLRFSPENSS-GRHPYAFIPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSVDPLRLPIKLPQLVLRSKNGIHLYLKPL 500          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C6A23_DROME (Probable cytochrome P450 6a23 OS=Drosophila melanogaster GN=Cyp6a23 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 48/160 (30.00%), Postives = 82/160 (51.25%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSY---VHAPTAVLTLHPEFGTHLILRKL 474
            NN+  Y G+  +K ++ +  E LR YP    L R    +    +    +  G  + +P + +H+DPE++ +   +FKPERF++  +   R   ++ PF  GPR CIGL F L++A + LA +++ + F +S      +      + L  E G HL + KL
Sbjct:  343 NNEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYPEPE-KFKPERFTDE-AIAARPSCTWLPFGEGPRNCIGLRFGLMQACVGLAYLIRGYKFSVSTETQIPMKFVVKSILLSAENGIHLKVEKL 500          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C6A18_DROME (Probable cytochrome P450 6a18 OS=Drosophila melanogaster GN=Cyp6a18 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 1
Query:   10 NNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKL-GN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF 387
            + K  Y  +  LK +  + NE LR Y     + R   K   + GN   ++ AG  + +P   +HHDP ++ +   EF+PERFS   S   R  V++ PF  GPR CIGL F  ++A+I LAM+++NF+F
Sbjct:  348 DQKFTYECIKDLKYLDQVINETLRHYTIVPNVDRVAAKRFVVPGNPKFVIEAGQSVIIPSSAIHHDPSIYPEPN-EFRPERFSPEES-AKRPSVAWLPFGEGPRNCIGLRFGQMQARIGLAMLIKNFTF 474          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: THAS_HUMAN (Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 43/128 (33.59%), Postives = 66/128 (51.56%), Query Frame = 1
Query:   19 PDYHGLNH-LKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            P++  L   L  + M+  E LR+YPPA    R   ++ ++    +PAG  + + V  +HHDPE W      F PERF+   ++      +Y PF  GPR C+G+   L+E K+ L  +L  F F+  P
Sbjct:  381 PEFCSLEEGLPYLDMVIAETLRMYPPAFRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPE-TFNPERFT-AEARQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQACP 506          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP52H_CANTR (Cytochrome P450 52A8 OS=Candida tropicalis GN=CYP52A8 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = 1
Query:   25 YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKL-------GN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNF-SFELSPSYVHAPTAV--LTLHPEFGT 453
            +  L     ++   NE LR+YP      R   K T L       GN  +++  G  +S  +   H DP  +GDDA EF+PER++E  ++  +   +Y PF  GPRIC+G  FAL EA   L  + Q+F + EL P  V+ P  +  LT+  + GT
Sbjct:  360 FESLKRCGYLKAFLNETLRVYPSVPRNFRIATKNTTLPRGGGSDGNSPVLVKKGEAVSYGINSTHLDPVYYGDDAAEFRPERWNEPSTR--KLGWAYLPFNGGPRICLGQQFALTEAGYVLVRLAQSFDTLELKPPVVYPPKRLTNLTMSLQDGT 512          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4FC_HUMAN (Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 1
Query:   22 DYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSF 387
            ++  L  L  + M   E LRL+PPA  ++R   ++  L +  ++P G+   + +I VHH+P +W D  + + P RF    SK  R+ +++ PF+ GPR CIG  FA+ E K+ LA++L +F F
Sbjct:  371 EWDDLAQLPFLTMCVKESLRLHPPAPFISRCCTQDIVLPDGRVIPKGITCLIDIIGVHHNPTVWPDPEV-YDPFRFDPENSK-GRSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALMLLHFRF 491          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15
Identity = 44/137 (32.12%), Postives = 70/137 (51.09%), Query Frame = 1
Query:   25 YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTL 435
            Y  LN+L  + +   E LR+YP   +L R V +E ++   I+PAG  I +  + +    ++   +   FKPERF    S    N  +Y PF+ GPR CIG  FA++E K   A +L+++  E   +   +P  +  L
Sbjct:  361 YDLLNNLNYMDLCIKETLRMYPSVPLLGRKVLQECEINGKIIPAGTNIGISPLFLGRSEDI-SSEPNTFKPERFDVVTSAEKLNPHAYIPFSAGPRNCIGQKFAMLEIKAIAANVLRHYEIEFVGNAEESPVLIAEL 496          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CP6A8_DROME4.489e-1537.10Cytochrome P450 6a8 OS=Drosophila melanogaster GN=... [more]
CP4D1_DROSI4.489e-1531.76Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]
CP4D1_DROME4.489e-1531.76Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP4B1_RABIT4.489e-1533.77Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CY... [more]
C6A23_DROME4.489e-1530.00Probable cytochrome P450 6a23 OS=Drosophila melano... [more]
C6A18_DROME4.489e-1537.21Probable cytochrome P450 6a18 OS=Drosophila melano... [more]
THAS_HUMAN5.863e-1533.59Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 P... [more]
CP52H_CANTR5.863e-1534.84Cytochrome P450 52A8 OS=Candida tropicalis GN=CYP5... [more]
CP4FC_HUMAN5.863e-1535.77Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE... [more]
C4D10_DROMT5.863e-1532.12Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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