CX294998

Overview
NameCX294998
Unique NameCX294998
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4D2_DROME (Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFS-FELSPSYVHAPTAVLTLHPEFGTHLILR 468
            L  LK ++ +  E LRL+PP  M+ R   ++ ++    +PAG   ++ + ++  DPE + +   EF+PERF   + ++  +  +Y PF+ GPR CIG  FA++E K  ++ +L++F    L P   H+   V  L    G HL L+
Sbjct:  358 LGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYF-ESPDEFRPERFDADVPQI--HPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSMNIV--LRSANGVHLGLK 498          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4A2_RAT (Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN-LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAVLTLHPEFGTHLILRKL 474
            L+ +    M   E LRLY P   ++R ++      +   +P G+++++ +  +HH+P  W +  + F P RFS       R+  +Y PF+ G R CIG  FA+ E K+A+A+ L  F     P+ +  P   L L  + G HL L+KL
Sbjct:  360 LDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNPKV-FDPSRFSPDSP---RHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMPRLVLKSKNGIHLRLKKL 503          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 37/123 (30.08%), Postives = 68/123 (55.28%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPA-VMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            + +++ ++ +  EV R++PP  ++L R + ++ K+    + AG ++ +    +H DP +WG DA EFKPER  +         + Y PF  G RIC G+N A+   ++ LA ++  F + + P
Sbjct:  344 VENMRYLKAVIKEVFRVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDP 466          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C6A17_DROME (Probable cytochrome P450 6a17 OS=Drosophila melanogaster GN=Cyp6a17 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15
Identity = 48/166 (28.92%), Postives = 85/166 (51.20%), Query Frame = 1
Query:    1 VFGNNKPD--YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN--LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAV----LTLHPEFGTHLILRKL 474
            VFG +  +  Y G+  +K ++ +  E LR YP    L R  + +    +    +  G  + +P + +H+DP+++ +  I FKPERF++      R   ++ PF  GPR CIGL F +++  + LA +++ + F +SP     P  +    + +  E G HL + KL
Sbjct:  337 VFGKHNKEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTDTDFSPEDPKYFIAKGTIVVIPALGIHYDPDIYPEPEI-FKPERFTDE-EIAARPSCTWLPFGEGPRNCIGLRFGMMQTCVGLAYLIRGYKFSVSPE-TQIPMKIVVKNILISAENGIHLKVEKL 499          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP4Z1_HUMAN (Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKE-TKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFS-EGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSPSYVHAPTAV--LTLHPEFGTHLILRKL 474
            L+ +    M   E LRLY P V ++R ++K  T      LPAG+ + + +  +HH+P  W D  + F P RFS E   K+  +  ++ PF+ G R CIG +FA++E K+A+A+ L    F+L+P +   P  V  + L  + G H+  +K+
Sbjct:  359 LSQMPYTTMCIKECLRLYAPVVNISRLLDKPITFPDGRSLPAGITVFINIWALHHNPYFWEDPQV-FNPLRFSRENSEKI--HPYAFIPFSAGLRNCIGQHFAIIECKVAVALTL--LRFKLAPDHSRPPQPVRQVVLKSKNGIHVFAKKV 504          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL 393
            G    D   +  LK ++ +  E LRL+PP  ++ R   +E ++    +PA  +I +    +  DP  W +D   F+PERF E       N   + PF  G RIC GL+F L   +I LA +L +F ++L
Sbjct:  332 GKTSVDLSEMQELKYMRSVVKETLRLHPPFPLIPRQSREECEINGFYIPARTRILINAWSIGRDPLYW-EDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKL 459          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C28C1_DROME (Probable cytochrome P450 28c1 OS=Drosophila melanogaster GN=Cyp28c1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.000e-14
Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = 1
Query:    7 GNNKPDYHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGN------LILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            G   PD   L  L  +   FNE LR+YP     ++   KE +L        L L  G  + +P+  +H+DP+L+ +  + F+PERF +G  K  + Q  +  F  GPR C+G+   L  AK ALA I+Q F   +SP
Sbjct:  336 GGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDV-FRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSP 471          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: CP391_DROME (Probable cytochrome P450 309a1 OS=Drosophila melanogaster GN=Cyp309a1 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 43/127 (33.86%), Postives = 64/127 (50.39%), Query Frame = 1
Query:   25 YHGLNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLG-----NLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFE 390
            Y  +N+L  +   FNE LRL  P     R   K T++       L L  GV + +P    HHD +++  +A EF+P+RF  G + V   +  + PF  GPRIC+G+    +  K A+  IL N+  E
Sbjct:  374 YDQINNLPYLDQCFNESLRLTTPIGFFMRICTKPTQINLGDDKTLDLEPGVTVMVPAYQYHHDNDIY-PEASEFRPDRFENGAASVLTKRGCFLPFGDGPRICLGMRVGQLSVKTAIVHILSNYQVE 499          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C97B3_ARATH (Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CYP97B3 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 1
Query:    1 VFGNNKPDYHGLNHLKIVQMIFNEVLRLYP-PAVMLARAVNKET--------KLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERF-----SEGIS------------KVTRNQV----SYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFEL--SPSYVHAPTAVLTLHPEFGTHLILRK 471
            V G   P Y  +  L+ +++I  EVLRL+P P +++ R +  ET        K G+ + P G  I + V  +H  P  W D+  +F+PERF     S GI              +  N++    ++ PF  GPR CIG  FAL+E+ +ALAM+ Q F  EL  +P  V   +   T+H + G    L++
Sbjct:  392 VLGQGPPTYESMKKLEYIRLIVVEVLRLFPQPPLLIRRTLKPETLPGGHKGEKEGHKV-PKGTDIFISVYNLHRSPYFW-DNPHDFEPERFLRTKESNGIEGWAGFDPSRSPGALYPNEIIADFAFLPFGGGPRKCIGDQFALMESTVALAMLFQKFDVELRGTPESVELVSGA-TIHAKNGMWCKLKR 577          
BLAST of CX294998 vs. ExPASy Swiss-Prot
Match: C4D20_DROME (Probable cytochrome P450 4d20 OS=Drosophila melanogaster GN=Cyp4d20 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.306e-14
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 1
Query:   34 LNHLKIVQMIFNEVLRLYPPAVMLARAVNKETKLGNLILPAGVQISLPVIMVHHDPELWGDDAIEFKPERFSEGISKVTRNQVSYFPFAWGPRICIGLNFALVEAKIALAMILQNFSFELSP 399
            L  LK +  +  E +RLYPP   + R   KE ++G+  +PA   I L +   H D   +  D + F+PERF E   +   N  +Y PF+ GP+ CIG  FA++E K+ ++ +L+   +EL P
Sbjct:  363 LQDLKYLDCVIKETMRLYPPVPAIGRHAQKELEIGDKTIPANTSIYLVLYYAHRDANYF-PDPLSFRPERFLED-QEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLR--FYELLP 480          
The following BLAST results are available for this feature:
BLAST of CX294998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CP4D2_DROME7.658e-1532.19Cytochrome P450 4d2 OS=Drosophila melanogaster GN=... [more]
CP4A2_RAT7.658e-1531.76Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2... [more]
C71AI_ARATH7.658e-1530.08Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C6A17_DROME7.658e-1528.92Probable cytochrome P450 6a17 OS=Drosophila melano... [more]
CP4Z1_HUMAN1.000e-1433.77Cytochrome P450 4Z1 OS=Homo sapiens GN=CYP4Z1 PE=2... [more]
C7D94_MENGR1.000e-1432.56Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C28C1_DROME1.000e-1435.04Probable cytochrome P450 28c1 OS=Drosophila melano... [more]
CP391_DROME1.306e-1433.86Probable cytochrome P450 309a1 OS=Drosophila melan... [more]
C97B3_ARATH1.306e-1432.28Cytochrome P450 97B3 OS=Arabidopsis thaliana GN=CY... [more]
C4D20_DROME1.306e-1435.25Probable cytochrome P450 4d20 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionC05065E02SK DroRLeaf1 Citrus clementina cDNA clone C05065E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294998 ID=CX294998; Name=CX294998; organism=Citrus clementina; type=EST; length=717bp
GTTTTTGGCAATAATAAGCCAGATTATCATGGATTGAATCACCTCAAAAT
TGTTCAAATGATATTCAACGAGGTACTGAGGCTTTATCCTCCAGCAGTTA
TGCTTGCTCGAGCTGTTAATAAAGAAACGAAACTTGGAAACTTGATATTA
CCCGCTGGGGTTCAAATCAGTTTGCCAGTGATCATGGTTCACCATGATCC
TGAACTTTGGGGTGATGATGCCATTGAGTTTAAACCTGAGAGGTTCTCTG
AAGGAATTTCAAAGGTGACCAGGAATCAAGTTTCTTATTTCCCATTTGCA
TGGGGTCCTAGGATATGCATTGGACTAAATTTCGCCCTGGTTGAGGCGAA
AATTGCTTTGGCAATGATTCTGCAAAATTTCTCATTCGAGTTGTCTCCGT
CCTATGTTCATGCTCCGACCGCAGTTCTAACTCTTCATCCAGAATTCGGT
ACCCACTTGATTCTACGGAAACTGTAGTGTGAGAATAATACAAGTAAATA
GTATATCATCAATAAGATTAGCATGATGCTAAATTTCCTTGCCGTTGTAA
TGAAGTTCAGAGCTTGGGCAGCAGCTGTTTGTGTGTGTATTATACACACA
CACACACACACACACACACACAAATTAGATTTTTGTATTGACAATACGTG
AGTTGAATCCATTTTTAAGGAATCATAATTATCACATCCCACATTGTCAT
TGTTTAGATGGTTTCAT
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