CX295003

Overview
NameCX295003
Unique NameCX295003
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECOLC (Periplasmic trehalase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---NKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECOL6 (Periplasmic trehalase OS=Escherichia coli O6 GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---SKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSATGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECOL5 (Periplasmic trehalase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---SKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECOK1 (Periplasmic trehalase OS=Escherichia coli O1:K1 / APEC GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---SKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECOHS (Periplasmic trehalase OS=Escherichia coli O9:H4 (strain HS) GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---NKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECODH (Periplasmic trehalase OS=Escherichia coli (strain K12 / DH10B) GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---NKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECOBW (Periplasmic trehalase OS=Escherichia coli (strain K12 / BW2952) GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---NKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECO8A (Periplasmic trehalase OS=Escherichia coli O8 (strain IAI1) GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYMWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---NKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECO7I (Periplasmic trehalase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=treA PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  375 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---SKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSATGTGGGGGEYPLQDGFGWTNGVTLKMLD 530
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_ECO57 (Putative periplasmic trehalase OS=Escherichia coli O157:H7 GN=treA PE=5 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20
Identity = 58/174 (33.33%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:   10 IDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLE 531
            I+   WN++ G + DY +            K+    N   A+   P++++    D         +   + LL   G+ T+  +SG+QWD PNGWAPLQ +  EGL   G    K +A DI+  ++      Y     + EKY+V   G  GGGGEY  Q GFGW+NGV L  L+
Sbjct:  371 IEKYLWNDQQGWYADYDL------------KSHKVRNQLTAAALFPLYVNAAAKDRA---NKMATATKTHLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQ---KEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLD 526
The following BLAST results are available for this feature:
BLAST of CX295003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
TREA_ECOLC1.220e-2033.33Periplasmic trehalase OS=Escherichia coli (strain ... [more]
TREA_ECOL61.220e-2033.33Periplasmic trehalase OS=Escherichia coli O6 GN=tr... [more]
TREA_ECOL51.220e-2033.33Periplasmic trehalase OS=Escherichia coli O6:K15:H... [more]
TREA_ECOK11.220e-2033.33Periplasmic trehalase OS=Escherichia coli O1:K1 / ... [more]
TREA_ECOHS1.220e-2033.33Periplasmic trehalase OS=Escherichia coli O9:H4 (s... [more]
TREA_ECODH1.220e-2033.33Periplasmic trehalase OS=Escherichia coli (strain ... [more]
TREA_ECOBW1.220e-2033.33Periplasmic trehalase OS=Escherichia coli (strain ... [more]
TREA_ECO8A1.220e-2033.33Periplasmic trehalase OS=Escherichia coli O8 (stra... [more]
TREA_ECO7I1.220e-2033.33Periplasmic trehalase OS=Escherichia coli O7:K1 (s... [more]
TREA_ECO571.220e-2033.33Putative periplasmic trehalase OS=Escherichia coli... [more]

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Properties
Property NameValue
Genbank descriptionC05065E08SK DroRLeaf1 Citrus clementina cDNA clone C05065E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295003 ID=CX295003; Name=CX295003; organism=Citrus clementina; type=EST; length=717bp
AAAGCGGCAATAGACTCTGTTTTCTGGAATGAAGAAAATGGGCAATGGCT
GGATTACTGGATAAGTAATGGAACTAGTAGCCAGGAATGCCAAAGATGGA
AAGCTTCAAACCAAAATAATAATACATTTGCCTCAAACTTTGTACCCATA
TGGATTGATTTATTCAACTCTGATACTTGTATAGTGGAGAAAGTCCGAAA
AAGCTTTCAAAGTTCAGGCTTACTCGGTGCTGCTGGAATTGCAACTTCGT
TGACAAGATCAGGTGAACAATGGGACTTTCCTAACGGCTGGGCGCCACTT
CAACACATGATAGTAGAAGGTTTGGGTAAGTCAGGATCACATGAAGCAAA
GTCGATGGCACAAGACATTGCTATGAGGTGGATCAATACCAATTATGTTG
CATACAAAGAAACTGGTGCTATGCATGAAAAATATAATGTAGAAAAATGT
GGAGATATTGGAGGTGGTGGTGAATACATACCCCAGACTGGTTTTGGCTG
GTCAAATGGAGTCGTGTTGGCGTTCTTGGAGGAGTTTGGGTGGCCAGCAG
ATCTGAAGATAGGTTGCAATGGAGTTATGCTCTGAAGAGATGAGCTTTGA
CTTGGTTTATAATTACCGACCTAATTATCCTGGATTCTCTCCCTTCTTTT
TCTTGTCTTGTCAATTCTATTGAACGTGGGAACTTGATATATTATGTACA
TTCATATTTTGCATTTT
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