CX295003

Overview
NameCX295003
Unique NameCX295003
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2291 contig Ccv1_Contig2291:170..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_XANOM (Periplasmic trehalase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=treA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19
Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 1 
Query:    1 KAAIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFL 528
            K AID+  WN+  G + DY             W+    ++   A+   P++  L + D     K   S     L+   G+AT+  ++G+QWD PNGWAPLQ + V+GL + G    +++A+ I  R++      +     + EKY +E     GGGGEY  Q GFGW+NGV L  L
Sbjct:  388 KQAIDAHLWNKA-GYYADY------------DWQTRTLSDQITAAALYPLFAGLASDDHA---KRTASTVRRTLVRPGGLATTAVKTGQQWDEPNGWAPLQWVAVDGLRRYGE---QALARTIGERFLAQVQALFAREHKLVEKYGLETNAAGGGGGEYALQDGFGWTNGVTLMLL 544
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOUT (Cytoplasmic trehalase OS=Escherichia coli (strain UTI89 / UPEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOL6 (Cytoplasmic trehalase OS=Escherichia coli O6 GN=treF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOL5 (Cytoplasmic trehalase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOK1 (Cytoplasmic trehalase OS=Escherichia coli O1:K1 / APEC GN=treF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECO81 (Cytoplasmic trehalase OS=Escherichia coli O81 (strain ED1a) GN=treF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECO45 (Cytoplasmic trehalase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECO27 (Cytoplasmic trehalase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARNWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_SHIB3 (Cytoplasmic trehalase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
[Close]
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOSM (Cytoplasmic trehalase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1 
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549
The following BLAST results are available for this feature:
BLAST of CX295003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
TREA_XANOM5.125e-1933.52Periplasmic trehalase OS=Xanthomonas oryzae pv. or... [more]
TREF_ECOUT8.741e-1933.70Cytoplasmic trehalase OS=Escherichia coli (strain ... [more]
TREF_ECOL68.741e-1933.70Cytoplasmic trehalase OS=Escherichia coli O6 GN=tr... [more]
TREF_ECOL58.741e-1933.70Cytoplasmic trehalase OS=Escherichia coli O6:K15:H... [more]
TREF_ECOK18.741e-1933.70Cytoplasmic trehalase OS=Escherichia coli O1:K1 / ... [more]
TREF_ECO818.741e-1933.70Cytoplasmic trehalase OS=Escherichia coli O81 (str... [more]
TREF_ECO458.741e-1933.70Cytoplasmic trehalase OS=Escherichia coli O45:K1 (... [more]
TREF_ECO278.741e-1933.70Cytoplasmic trehalase OS=Escherichia coli O127:H6 ... [more]
TREF_SHIB31.142e-1833.70Cytoplasmic trehalase OS=Shigella boydii serotype ... [more]
TREF_ECOSM1.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC05065E08SK DroRLeaf1 Citrus clementina cDNA clone C05065E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295003 ID=CX295003; Name=CX295003; organism=Citrus clementina; type=EST; length=717bp
AAAGCGGCAATAGACTCTGTTTTCTGGAATGAAGAAAATGGGCAATGGCT
GGATTACTGGATAAGTAATGGAACTAGTAGCCAGGAATGCCAAAGATGGA
AAGCTTCAAACCAAAATAATAATACATTTGCCTCAAACTTTGTACCCATA
TGGATTGATTTATTCAACTCTGATACTTGTATAGTGGAGAAAGTCCGAAA
AAGCTTTCAAAGTTCAGGCTTACTCGGTGCTGCTGGAATTGCAACTTCGT
TGACAAGATCAGGTGAACAATGGGACTTTCCTAACGGCTGGGCGCCACTT
CAACACATGATAGTAGAAGGTTTGGGTAAGTCAGGATCACATGAAGCAAA
GTCGATGGCACAAGACATTGCTATGAGGTGGATCAATACCAATTATGTTG
CATACAAAGAAACTGGTGCTATGCATGAAAAATATAATGTAGAAAAATGT
GGAGATATTGGAGGTGGTGGTGAATACATACCCCAGACTGGTTTTGGCTG
GTCAAATGGAGTCGTGTTGGCGTTCTTGGAGGAGTTTGGGTGGCCAGCAG
ATCTGAAGATAGGTTGCAATGGAGTTATGCTCTGAAGAGATGAGCTTTGA
CTTGGTTTATAATTACCGACCTAATTATCCTGGATTCTCTCCCTTCTTTT
TCTTGTCTTGTCAATTCTATTGAACGTGGGAACTTGATATATTATGTACA
TTCATATTTTGCATTTT
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