CX295003

Overview
NameCX295003
Unique NameCX295003
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2291 contig Ccv1_Contig2291:170..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOLU (Cytoplasmic trehalase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOLI (Cytoplasmic trehalase OS=Escherichia coli (strain K12) GN=treF PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECODH (Cytoplasmic trehalase OS=Escherichia coli (strain K12 / DH10B) GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECOBW (Cytoplasmic trehalase OS=Escherichia coli (strain K12 / BW2952) GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECO7I (Cytoplasmic trehalase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECO5E (Cytoplasmic trehalase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ECO57 (Cytoplasmic trehalase OS=Escherichia coli O157:H7 GN=treF PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREA_PSEAE (Periplasmic trehalase OS=Pseudomonas aeruginosa GN=treA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  220 LLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFG 540
            LL   G+AT+   SG+QWD PNGWAPLQ + V+GL   G     ++A+DI  R++      Y   G + EKY++      GGGGEY  Q GFGWSNGV L  L  +G
Sbjct:  437 LLRPGGLATTTRASGQQWDEPNGWAPLQWVAVQGLRAYGRD---ALAEDIGRRFLAQVQQVYDREGKLVEKYDISGNQGGGGGGEYPLQDGFGWSNGVTLQLLRLYG 540          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_SHIBS (Cytoplasmic trehalase OS=Shigella boydii serotype 4 (strain Sb227) GN=treF PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.947e-18
Identity = 61/181 (33.70%), Postives = 90/181 (49.72%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTCIVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNV-EKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A+    W++ENG + DY             W+   Q     A+  VP+++ + N +    +++  + +S  LL   GI  S   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T    Y E   + EKY++ +     GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVKRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMANHEQA--DRLANAVRSR-LLTPGGILASEYETGEQWDKPNGWAPLQWMAIQGFKMYGD---DLLGDEIARSWLKTVNQFYLEQHKLIEKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP 549          
BLAST of CX295003 vs. ExPASy Swiss-Prot
Match: TREF_ESCF3 (Cytoplasmic trehalase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=treF PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17
Identity = 59/183 (32.24%), Postives = 90/183 (49.18%), Query Frame = 1
Query:    7 AIDSVFWNEENGQWLDYWISNGTSSQECQRWKASNQNNNTFASNFVPIWIDLFNSDTC--IVEKVRKSFQSSGLLGAAGIATSLTRSGEQWDFPNGWAPLQHMIVEGLGKSGSHEAKSMAQDIAMRWINTNYVAYKETGAMHEKYNVE-KCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 546
            A++   W++ENG + DY             W+   Q     A+  VP+++ + + +    + + VR       LL   GI  +   +GEQWD PNGWAPLQ M ++G    G      +  +IA  W+ T  + Y++   + EKY++       GGGGEY  Q GFGW+NGVV   +  +G P
Sbjct:  388 AVNRYLWDDENGIYRDY------------DWRRE-QLALFSAAAIVPLYVGMASHEQADRLGDAVRNR-----LLTPGGILATEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDH---LGDEIAHSWLQTVNLFYQQHHKLIEKYHIAGGTPREGGGGEYPLQDGFGWTNGVVRRLISLYGEP 549          
The following BLAST results are available for this feature:
BLAST of CX295003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
TREF_ECOLU1.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli O17:K52:... [more]
TREF_ECOLI1.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli (strain ... [more]
TREF_ECODH1.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli (strain ... [more]
TREF_ECOBW1.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli (strain ... [more]
TREF_ECO7I1.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli O7:K1 (s... [more]
TREF_ECO5E1.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli O157:H7 ... [more]
TREF_ECO571.142e-1833.70Cytoplasmic trehalase OS=Escherichia coli O157:H7 ... [more]
TREA_PSEAE1.142e-1845.79Periplasmic trehalase OS=Pseudomonas aeruginosa GN... [more]
TREF_SHIBS1.947e-1833.70Cytoplasmic trehalase OS=Shigella boydii serotype ... [more]
TREF_ESCF31.649e-1732.24Cytoplasmic trehalase OS=Escherichia fergusonii (s... [more]

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Properties
Property NameValue
Genbank descriptionC05065E08SK DroRLeaf1 Citrus clementina cDNA clone C05065E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295003 ID=CX295003; Name=CX295003; organism=Citrus clementina; type=EST; length=717bp
AAAGCGGCAATAGACTCTGTTTTCTGGAATGAAGAAAATGGGCAATGGCT
GGATTACTGGATAAGTAATGGAACTAGTAGCCAGGAATGCCAAAGATGGA
AAGCTTCAAACCAAAATAATAATACATTTGCCTCAAACTTTGTACCCATA
TGGATTGATTTATTCAACTCTGATACTTGTATAGTGGAGAAAGTCCGAAA
AAGCTTTCAAAGTTCAGGCTTACTCGGTGCTGCTGGAATTGCAACTTCGT
TGACAAGATCAGGTGAACAATGGGACTTTCCTAACGGCTGGGCGCCACTT
CAACACATGATAGTAGAAGGTTTGGGTAAGTCAGGATCACATGAAGCAAA
GTCGATGGCACAAGACATTGCTATGAGGTGGATCAATACCAATTATGTTG
CATACAAAGAAACTGGTGCTATGCATGAAAAATATAATGTAGAAAAATGT
GGAGATATTGGAGGTGGTGGTGAATACATACCCCAGACTGGTTTTGGCTG
GTCAAATGGAGTCGTGTTGGCGTTCTTGGAGGAGTTTGGGTGGCCAGCAG
ATCTGAAGATAGGTTGCAATGGAGTTATGCTCTGAAGAGATGAGCTTTGA
CTTGGTTTATAATTACCGACCTAATTATCCTGGATTCTCTCCCTTCTTTT
TCTTGTCTTGTCAATTCTATTGAACGTGGGAACTTGATATATTATGTACA
TTCATATTTTGCATTTT
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