CX295005

Overview
NameCX295005
Unique NameCX295005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_SYNJA (CTP synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=pyrG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 78/158 (49.37%), Postives = 104/158 (65.82%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRT-HMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATK 471
            IP+LG+CLGMQ +VI++  ++ GL+RANS EFD +TP+PV+  +PE     H+G T+RLG        PD + +KLY  +  V ERHRHRYE N     +  E+G    G     + +EI+ELPSHPF++  QFHPEF+SRP RP  LFLGLI AA +
Sbjct:  375 IPFLGLCLGMQCAVIDWGCNIAGLERANSYEFDPDTPHPVISLLPEQKDVEHLGGTLRLGLYPCRI-LPDTLAAKLYGES-IVYERHRHRYEFNNAYRSLFLESGYVISGVSPDNRLVEIIELPSHPFFIATQFHPEFRSRPNRPHPLFLGLIEAALR 530          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_CLOTH (CTP synthase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=pyrG PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.121e-36
Identity = 81/161 (50.31%), Postives = 103/161 (63.98%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRT-HMGSTMRLGSRRTLFQTPDCVTSKLYR--NAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQ 474
            +PY GICLGMQ++V+EFAR+V GLK ANS+EFD+ +P+PV+  MPE       G TMRLG    L+       S  YR   +E + ERHRHRYE N E   +L   GL   G   + K +EI+EL  HP+++GVQFHPEFKSRP RP  LF   I AA ++
Sbjct:  376 VPYFGICLGMQMAVVEFARNVAGLKMANSSEFDANSPHPVIDLMPEQKDIDEKGGTMRLG----LYPCKIIKDSSAYRIYESELIYERHRHRYEFNNEYRELLTSKGLILAGLSPSEKLVEIIELKDHPWFIGVQFHPEFKSRPNRPHPLFKDFIRAAVER 532          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_PYRHO (CTP synthase OS=Pyrococcus horikoshii GN=pyrG PE=3 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.809e-35
Identity = 81/157 (51.59%), Postives = 106/157 (67.52%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH-MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVG-KDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            IP+LGIC G Q++V+EFAR+VLG+K A+S E D +TP PVV  MPE      +G TMRLG+     +    +  +LY+  E V ERHRHR+EVNP+ I   E+AGL F G   +  +RMEILELP   +++  QFHPEFKSRP RP+ +F GL+ AA
Sbjct:  372 IPFLGICFGFQLTVVEFARNVLGMKGAHSTEIDPQTPYPVVDLMPEQRNLEKLGGTMRLGAYPVKIK-KGTLAYRLYKK-ELVYERHRHRWEVNPDYIEAFEKAGLVFSGVAGDDERRMEILELPDKRYFIATQFHPEFKSRPMRPAPVFHGLVRAA 526          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_HALMA (CTP synthase OS=Haloarcula marismortui GN=pyrG PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.809e-35
Identity = 82/157 (52.23%), Postives = 106/157 (67.52%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH-MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILEL--PSHPFYVGVQFHPEFKSRPGRPSALFLGLILA 462
            IP+LG+CLG Q++V+E+AR+VL L  A+S E + +TP+PV+  +PE      MG TMRLG+  T     + + + LY   E   ERHRHRYEVNPE I  LE AGLKF G+   G RMEILEL    HP+++G QFHPEF+SRP R S  F+GL+ A
Sbjct:  385 IPFLGLCLGFQMAVVEYARNVLDLDDAHSAELEEDTPHPVIDILPEQYEIEDMGGTMRLGAHETEINA-NTLAATLY-GGESCTERHRHRYEVNPEYIDDLEAAGLKFSGR--AGNRMEILELGPEDHPYFIGTQFHPEFRSRPTRASPPFVGLLEA 537          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_THET8 (CTP synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=pyrG PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.086e-35
Identity = 87/162 (53.70%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH-MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKR------MEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            IPYLGICLG+QI+VIEFAR+V GLK ANS EFD  TP+PV+  MPE      +G TMRLG      + P  +  +LY   E V ERHRHRYEVNP  +  LE AGL  V     G R      +E +EL  HPF++G+Q HPEFKSRP RPS  F+G + AA
Sbjct:  385 IPYLGICLGLQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIK-PGTLLHRLY-GKEEVLERHRHRYEVNPLYVDGLERAGL-VVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAA 543          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_FIBSS (CTP synthase OS=Fibrobacter succinogenes (strain ATCC 19169 / S85) GN=pyrG PE=3 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.086e-35
Identity = 85/164 (51.83%), Postives = 103/164 (62.80%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSR-THMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVN--PEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLEA 483
            +P LGICLGMQ  VIEFAR VLG K ANS EFD  T +PV+  M E    T  G TMRLG+        D   +KLY++ E + ERHRHRYE N   E    LE+AGLK  G    GK +E++EL +HP++   QFHPEFKSRP  P  LF GL+ AA +Q +A
Sbjct:  384 VPLLGICLGMQCCVIEFARDVLGWKDANSTEFDENTTHPVIDLMDEQKNVTEKGGTMRLGAYPCKL-AKDSNAAKLYKS-EKISERHRHRYEFNYNSEFRKELEKAGLKIAGTSPDGKLVEMVELKNHPYFEACQFHPEFKSRPTDPHPLFTGLVKAALEQKKA 545          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_SULTO (CTP synthase OS=Sulfolobus tokodaii GN=pyrG PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 4.031e-35
Identity = 74/156 (47.44%), Postives = 111/156 (71.15%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSR-THMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            +P+LGIC GMQ++V+EFAR+VLGL++A++ E D  TP+PV+  + E  +   +G TMRLGS++ + +    +  ++Y N E V ERHRHRYEVNPE + +L++ GL   G  E G  +E++EL +H F++G+Q HPE+KSRP  PS +F+G + AA
Sbjct:  376 VPFLGICYGMQLAVVEFARNVLGLEKAHTTEVDPNTPHPVITLLDEQKKVVQIGGTMRLGSQKVIVK-EGTLAYRIYGNIE-VYERHRHRYEVNPEYVDLLQKGGLVISGVSENG-LVEMIELKNHKFFLGLQGHPEYKSRPLAPSPVFIGFLRAA 528          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_THET2 (CTP synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=pyrG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.264e-35
Identity = 87/162 (53.70%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH-MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKR------MEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            IPYLGICLG+QI+VIEFAR+V GLK ANS EFD  TP+PV+  MPE      +G TMRLG      + P  +  +LY   E V ERHRHRYEVNP  +  LE AGL  V     G R      +E +EL  HPF++G+Q HPEFKSRP RPS  F+G + AA
Sbjct:  385 IPYLGICLGLQIAVIEFARNVAGLKGANSTEFDPYTPHPVIDLMPEQLEVEGLGGTMRLGDWPMRIK-PGTLLHRLY-GKEEVLERHRHRYEVNPLYVDGLERAGL-VVSATTPGMRGRGAGLVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAA 543          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_THEEB (CTP synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.264e-35
Identity = 76/158 (48.10%), Postives = 99/158 (62.66%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSR-THMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATK 471
            IP+LG+CLGMQ +VIE+AR + GL+ ANS EFD+ TP+PV+  +PE      +G TMRLG        P  +  KLY     + ERHRHRYE N     +  E G +  G    G+ +EI+E P+HPF++ VQFHPEF+SRP  P  LF GL+ AA K
Sbjct:  375 IPFLGLCLGMQCAVIEWARHIAGLENANSAEFDANTPHPVIHLLPEQQDIVDLGGTMRLGLYACRL-APHSLAEKLYGET-VIYERHRHRYEFNNAYRNLFLETGYQITGTSPDGRLVEIIEYPAHPFFIAVQFHPEFRSRPNAPHPLFYGLLAAAAK 530          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_SULSO (CTP synthase OS=Sulfolobus solfataricus GN=pyrG PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.875e-35
Identity = 77/155 (49.68%), Postives = 104/155 (67.10%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSR-THMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILA 462
            IP+LGIC G Q+S++EFAR VLGL  ANS E +  T +PV+  + E    T +G TMRLG+++ + +    +  +LY   + V ERHRHRYEVNP+ + +LE+AGL   G  E G  +EI+ELPS+ F+V  Q HPEFKSRP  PS ++LG I A
Sbjct:  380 IPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKNVTQLGGTMRLGAQKIILK-EGTIAYQLY-GKKVVYERHRHRYEVNPKYVDILEDAGLVVSGISENG-LVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRA 531          
The following BLAST results are available for this feature:
BLAST of CX295005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_SYNJA8.121e-3649.37CTP synthase OS=Synechococcus sp. (strain JA-3-3Ab... [more]
PYRG_CLOTH8.121e-3650.31CTP synthase OS=Clostridium thermocellum (strain A... [more]
PYRG_PYRHO1.809e-3551.59CTP synthase OS=Pyrococcus horikoshii GN=pyrG PE=3... [more]
PYRG_HALMA1.809e-3552.23CTP synthase OS=Haloarcula marismortui GN=pyrG PE=... [more]
PYRG_THET83.086e-3553.70CTP synthase OS=Thermus thermophilus (strain HB8 /... [more]
PYRG_FIBSS3.086e-3551.83CTP synthase OS=Fibrobacter succinogenes (strain A... [more]
PYRG_SULTO4.031e-3547.44CTP synthase OS=Sulfolobus tokodaii GN=pyrG PE=3 S... [more]
PYRG_THET25.264e-3553.70CTP synthase OS=Thermus thermophilus (strain HB27 ... [more]
PYRG_THEEB5.264e-3548.10CTP synthase OS=Thermosynechococcus elongatus (str... [more]
PYRG_SULSO6.875e-3549.68CTP synthase OS=Sulfolobus solfataricus GN=pyrG PE... [more]

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Properties
Property NameValue
Genbank descriptionC05065E10SK DroRLeaf1 Citrus clementina cDNA clone C05065E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295005 ID=CX295005; Name=CX295005; organism=Citrus clementina; type=EST; length=730bp
ATTCCTTATCTTGGCATTTGCTTAGGCATGCAGATTTCTGTGATTGAGTT
TGCTAGATCTGTTCTGGGTTTAAAAAGGGCAAACAGCAATGAGTTTGATT
CTGAAACACCAAATCCTGTAGTAATTTTCATGCCTGAGGGTTCAAGAACA
CATATGGGAAGTACGATGAGACTAGGTTCTCGAAGAACATTATTCCAAAC
CCCTGATTGTGTCACCTCAAAGTTGTATCGTAATGCGGAGTATGTGGATG
AACGACATCGACACAGATATGAGGTGAACCCAGAGGTAATTGGAGTTCTA
GAAGAAGCTGGCCTAAAATTTGTAGGGAAGGATGAAACTGGAAAAAGAAT
GGAGATATTGGAGCTTCCAAGTCATCCATTCTATGTTGGAGTACAGTTCC
ATCCAGAGTTCAAATCACGGCCGGGGAGGCCCTCAGCTCTGTTTTTAGGT
CTTATATTGGCGGCGACAAAGCAGTTGGAAGCATATCTTAATACACATCA
GAATGGATGTTGATCTAGAACTCTTCACTGTCCAGAAGGTTCTAGAACAT
TTTTTACAATTATTAGATTTTGCCAGTCCCGGGATGAAGAGTCCGAGTGG
AGTGAAGAAAATTTTGTTGTACTTGAGTAGAAATTAGCAGTTATAGCATT
CTTCTATAAAATATGCATATTCCCAGCTAGTTTTGGGGGGGAAAAAAAGG
TTTTCAAAACTTTCCTCACACTAACATATA
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