CX295005

Overview
NameCX295005
Unique NameCX295005
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length730
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_STRE4 (CTP synthase OS=Streptococcus equi subsp. equi (strain 4047) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 67/158 (42.41%), Postives = 90/158 (56.96%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH-MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATK 471
            +P LGICLGMQ++ +EFAR VLG+++ANS E D +T  P++  M +      MG T+RLG      +      +  Y N E V  RHRHRYE N +     E AG  F G     + +EI+ELP   F+V  Q+HPE +SRP RP  L+   + AA K
Sbjct:  375 VPMLGICLGMQLTCVEFARHVLGMEKANSFELDPDTAYPIIDIMRDQIDIEDMGGTLRLGLYPCKLKAGSRAAAA-YNNQEVVQRRHRHRYEFNNKFRQDFEAAGFVFSGVSPDNRLVEIVELPEKKFFVAAQYHPELQSRPNRPEELYTAFVTAAVK 531          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_SHELP (CTP synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 72/166 (43.37%), Postives = 98/166 (59.04%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEG-----------SRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            +PY GICLGMQ+++IEFAR V GL+ A+S EF+ +TP+PVV  + E              + +G TMRLG++           ++ Y+    V ERHRHRYEVN      LE+AGL F G     + +E++ELP+HP++V  QFHPEF S P     LF G + AA
Sbjct:  373 LPYFGICLGMQVALIEFARHVAGLENAHSTEFNKDTPHPVVGLITEWIDEKGNIEQRHEESDLGGTMRLGAQ-LCHLIEGTKAAEAYKGLTCV-ERHRHRYEVNNTYRERLEKAGLVFSGLSTDRQLVEMIELPNHPWFVAGQFHPEFTSTPRDGQPLFQGFVAAA 536          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_OCHA4 (CTP synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTHM----------GSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQ 474
            +PY GIC GMQ++ IE AR+++G++ A+S EF   T  PVV  M E  + +M          G TMRLG+     ++   + +++Y + + + ERHRHRYEVN +    LE AGL F G    G   E +E P HP+++GVQ+HPE KSRP  P  LF   I AA +Q
Sbjct:  374 VPYFGICFGMQMACIEAARNLVGIENASSTEF-GPTKEPVVGLMTEWLKGNMLEKRASAGDLGGTMRLGAYEAALKSGSKI-AEIYGSTD-ISERHRHRYEVNIDYKERLESAGLNFAGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPFEPHPLFASFIEAAIEQ 538          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_NITHX (CTP synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=pyrG PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 74/168 (44.05%), Postives = 95/168 (56.55%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH----------MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQ 474
            +PY GIC GMQ++VIE AR+++G+  ANS EF   T  P+V  M E  R +          +G TMRLG+     +    V S +Y  A  + ERHRHRYEVN      LE+ GL+F G    G   EI+E   HP+++GVQ+HPE KSRP  P  LF   I AA  Q
Sbjct:  373 VPYFGICFGMQMAVIEAARNLVGIPSANSTEF-GPTSEPLVGLMTEWLRGNELEKRSRAGDLGGTMRLGAYPAALKRGSRV-SGIYGGALEISERHRHRYEVNTAYKDRLEQHGLRFSGLSPDGVLPEIVEYEDHPWFIGVQYHPELKSRPFEPHPLFASFIQAAVVQ 538          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_ERWCT (CTP synthase OS=Erwinia carotovora subsp. atroseptica GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28
Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPE-----------GSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            IPYLGICLGMQ++++EFAR+V G++ ANS EF  +   PVV  + E              + +G TMR+G ++    T   +  ++Y   + + ERHRHRYEVN  ++  +E AGL+  G     K +EI+ELP HP++V  QFHPEF S P     LF G + AA
Sbjct:  373 IPYLGICLGMQVALMEFARNVAGMEGANSTEFVPDCKYPVVALITEWRDENGDVEVRDEASDLGGTMRVGGQQCHL-TEGSLVRQMY-GEQTIIERHRHRYEVNNMLLKQIEAAGLRVAGLSADRKLVEIVELPDHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_SINMW (CTP synthase OS=Sinorhizobium medicae (strain WSM419) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28
Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH----------MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQ 474
            +PY GIC GMQ++V+E AR++ G+++A+S EF   T  PVV  M E  + +          +G TMRLG+ R   + P+   + +Y + + + ERHRHRYEVN +    LE  GL F G    G   E +E P HP+++GVQ+HPE KSRP  P  LF   I AA +Q
Sbjct:  374 VPYFGICFGMQMAVVEAARNLAGIEKASSTEF-GPTKEPVVGLMTEWVKGNELEKRSAAGDLGGTMRLGAYRAALK-PETKIAGIYGSPD-ISERHRHRYEVNVDYKDRLESCGLVFSGMSPDGVLPETVEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAALEQ 538          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_SHEPA (CTP synthase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28
Identity = 73/166 (43.98%), Postives = 97/166 (58.43%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEG-----------SRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            +PY GICLGMQ+++IEFAR V GL+ A+S EF  ETP+PVV  + E              + +G TMRLG++    +      +  Y++   V ERHRHRYEVN      LE+AGL F G       +E++ELP+HP++V  QFHPEF S P     LF G + AA
Sbjct:  373 LPYFGICLGMQVALIEFARHVAGLEGAHSTEFKPETPHPVVGLITEWINEDGQVEERHEESDLGGTMRLGAQLCHLEE-GTKAAAAYKSTTCV-ERHRHRYEVNNNYKERLEKAGLIFSGLSSDRSLVEMIELPNHPWFVAGQFHPEFTSTPRDGQPLFEGFVAAA 536          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_SACD2 (CTP synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28
Identity = 71/171 (41.52%), Postives = 98/171 (57.31%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPE-----------GSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQLE 480
            +PYLGICLGMQ +VIEFAR+VL L  ANS EFD ++P PV+  + E              + +G TMRLG++    +    +  ++Y  A  + ERHRHR+EVN   +  L + GL+  G       +E++E+P HP++V  QFHPEF S P     LF   I AA +Q E
Sbjct:  372 VPYLGICLGMQTAVIEFARNVLKLDGANSTEFDRKSPFPVIGLITEWINEEGKVETRDESSDLGGTMRLGAQECHLEENSRIR-EIYGKANII-ERHRHRFEVNNRFLDQLRQGGLRIGGWSSDDTLVEVVEVPDHPWFVACQFHPEFTSTPRDGHPLFTSYIQAAVEQNE 540          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_RHOP5 (CTP synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28
Identity = 74/168 (44.05%), Postives = 95/168 (56.55%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPEGSRTH----------MGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAATKQ 474
            +PY GIC GMQ++VIE AR++ G+  ANS EF   T  P+V  M E  R +          +G TMRLG+     +    V S++Y +   + ERHRHRYEVN      LE+ GL+F G    G   EI+E   HP+++GVQFHPE KSRP  P  LF   I AA  Q
Sbjct:  374 VPYFGICFGMQMAVIEAARNLAGIADANSTEF-GPTKEPLVGLMTEWLRGNQLEKRSNAGDLGGTMRLGAYPAALKRGSRV-SQIYGDVLEISERHRHRYEVNTAYKDRLEQHGLRFSGLSPDGVLPEIVEYEGHPWFIGVQFHPELKSRPFEPHPLFASFIEAAMAQ 539          
BLAST of CX295005 vs. ExPASy Swiss-Prot
Match: PYRG_PECCP (CTP synthase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.798e-28
Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 1
Query:    1 IPYLGICLGMQISVIEFARSVLGLKRANSNEFDSETPNPVVIFMPE-----------GSRTHMGSTMRLGSRRTLFQTPDCVTSKLYRNAEYVDERHRHRYEVNPEVIGVLEEAGLKFVGKDETGKRMEILELPSHPFYVGVQFHPEFKSRPGRPSALFLGLILAA 465
            +PYLGICLGMQ++++EFAR+V G++ ANS EF  +   PVV  + E              + +G TMR+G ++    T   +  ++Y   + + ERHRHRYEVN  ++  +E AGL+  G     K +EI+ELP HP++V  QFHPEF S P     LF G + AA
Sbjct:  373 VPYLGICLGMQVALMEFARNVAGMEGANSTEFVPDCKYPVVALITEWRDENGNVEVRDEASDLGGTMRVGGQQCHL-TEGSLVRQMY-GEQTIIERHRHRYEVNNMLLKQIEAAGLRVAGLSADRKLVEIVELPDHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536          
The following BLAST results are available for this feature:
BLAST of CX295005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_STRE42.142e-2842.41CTP synthase OS=Streptococcus equi subsp. equi (st... [more]
PYRG_SHELP2.142e-2843.37CTP synthase OS=Shewanella loihica (strain ATCC BA... [more]
PYRG_OCHA42.142e-2842.26CTP synthase OS=Ochrobactrum anthropi (strain ATCC... [more]
PYRG_NITHX2.142e-2844.05CTP synthase OS=Nitrobacter hamburgensis (strain X... [more]
PYRG_ERWCT2.142e-2842.17CTP synthase OS=Erwinia carotovora subsp. atrosept... [more]
PYRG_SINMW2.798e-2842.26CTP synthase OS=Sinorhizobium medicae (strain WSM4... [more]
PYRG_SHEPA2.798e-2843.98CTP synthase OS=Shewanella pealeana (strain ATCC 7... [more]
PYRG_SACD22.798e-2841.52CTP synthase OS=Saccharophagus degradans (strain 2... [more]
PYRG_RHOP52.798e-2844.05CTP synthase OS=Rhodopseudomonas palustris (strain... [more]
PYRG_PECCP2.798e-2841.57CTP synthase OS=Pectobacterium carotovorum subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC05065E10SK DroRLeaf1 Citrus clementina cDNA clone C05065E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295005 ID=CX295005; Name=CX295005; organism=Citrus clementina; type=EST; length=730bp
ATTCCTTATCTTGGCATTTGCTTAGGCATGCAGATTTCTGTGATTGAGTT
TGCTAGATCTGTTCTGGGTTTAAAAAGGGCAAACAGCAATGAGTTTGATT
CTGAAACACCAAATCCTGTAGTAATTTTCATGCCTGAGGGTTCAAGAACA
CATATGGGAAGTACGATGAGACTAGGTTCTCGAAGAACATTATTCCAAAC
CCCTGATTGTGTCACCTCAAAGTTGTATCGTAATGCGGAGTATGTGGATG
AACGACATCGACACAGATATGAGGTGAACCCAGAGGTAATTGGAGTTCTA
GAAGAAGCTGGCCTAAAATTTGTAGGGAAGGATGAAACTGGAAAAAGAAT
GGAGATATTGGAGCTTCCAAGTCATCCATTCTATGTTGGAGTACAGTTCC
ATCCAGAGTTCAAATCACGGCCGGGGAGGCCCTCAGCTCTGTTTTTAGGT
CTTATATTGGCGGCGACAAAGCAGTTGGAAGCATATCTTAATACACATCA
GAATGGATGTTGATCTAGAACTCTTCACTGTCCAGAAGGTTCTAGAACAT
TTTTTACAATTATTAGATTTTGCCAGTCCCGGGATGAAGAGTCCGAGTGG
AGTGAAGAAAATTTTGTTGTACTTGAGTAGAAATTAGCAGTTATAGCATT
CTTCTATAAAATATGCATATTCCCAGCTAGTTTTGGGGGGGAAAAAAAGG
TTTTCAAAACTTTCCTCACACTAACATATA
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