CX295008

Overview
NameCX295008
Unique NameCX295008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            ++KG + G KITFP E DE P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  204 IKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            ++KG + G KITFP E DE P+++  DIVF+++ K+HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  204 IKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            ++KG + G KITFP E DE P+++  DIVFV++ KEHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F V FP+ +S    ++L   LP
Sbjct:  204 IKKGWKEGTKITFPREGDETPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.411e-23
Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            ++KG + G KITFP E DE P ++  DIVFV++ K+HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F V FP+++S    ++L   LP
Sbjct:  204 IKKGWKEGTKITFPREGDETPTSIPADIVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            +++G + G KITFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  215 IKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            +++G + G KITFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  215 IKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.258e-22
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            +++G + G KITFP E D  PD +  DIVFVL+ K H  F+R G ++     +SL EALCG    I  +DGR  +I     +V+KP   K +  EG+P  + P  RG L + F V FP+ L+P   ++L+  LP
Sbjct:  215 IKRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGR--VIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHLP 346          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB1_HUMAN (DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21
Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            V+KG + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  208 VKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21
Identity = 50/158 (31.65%), Postives = 89/158 (56.33%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 474
            VEKG ++G++I   G+  E P    GD++  +++K +  FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  250 VEKGTRDGERIMLQGQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.024e-20
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLP 402
            V++G + G KITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  208 VKRGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVLP 339          
The following BLAST results are available for this feature:
BLAST of CX295008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
DNJB4_PONAB1.292e-2341.04DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN1.292e-2341.04DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_MOUSE6.411e-2341.04DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]
DNJB4_BOVIN6.411e-2341.04DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DNJB5_MOUSE9.258e-2240.30DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN9.258e-2240.30DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN9.258e-2240.30DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNJB1_HUMAN4.595e-2141.04DnaJ homolog subfamily B member 1 OS=Homo sapiens ... [more]
DNJA1_DICDI4.595e-2131.65DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNJB1_MOUSE1.024e-2040.30DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC05065F01SK DroRLeaf1 Citrus clementina cDNA clone C05065F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295008 ID=CX295008; Name=CX295008; organism=Citrus clementina; type=EST; length=754bp
GTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGC
TGATGAAGCGCCCGACACTGTCACAGGTGACATTGTATTTGTTCTACAAC
AGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAG
CACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAAC
TCATTTGGATGGCCGGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAG
TCAAGCCGGACCAATTCAAGGCCATAAATGATGAAGGAATGCCTATGTAT
CAGAGGCCATTTATGAGGGGCAAACTGTACATTCATTTCACTGTTGACTT
CCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTAC
CTCCAAGGACCTCAGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAA
GAAACAACCCTGCATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCA
ACAAGCAGCTCAGGAGGCATACGATGAAGATGACGATATGCAAGGTGGTG
CCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTG
GCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAAGATTCTCAACATATT
TATTTTCTGTTATAGGCTTTAGAGGTTCTAGTTTTGGTTTGTCTGTCTTT
ATTCCTATGTTTTTCTGATAACTGACTATGTAATGGAATTCTAGCGTTGC
ACCT
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