CX295008

Overview
NameCX295008
Unique NameCX295008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DJB11_CANFA (DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.450e-16
Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 381
            +E G+++G +  F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  212 IEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DJB11_RAT (DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 381
            +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  212 IEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DJB11_MOUSE (DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16
Identity = 45/127 (35.43%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 381
            +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL EAL GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ K
Sbjct:  212 IEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAK 336          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DJB11_BOVIN (DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.885e-15
Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFP-ESLSPDQCKMLETVL 399
            +E G+++G +  F GE +   D   GD+ F ++  +H  F+R+GDDL+   T+SL E+L GF   ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP E LS +  + ++ +L
Sbjct:  212 IEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLSEEAREGIKQLL 343          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNAJ_BARQU (Chaperone protein dnaJ OS=Bartonella quintana GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.855e-13
Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 390
            +  G+++G +I   GE D        GD+   L  K H  F+R+G DL     LS+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH T++ P+ L+ +Q ++L+
Sbjct:  220 IPAGIEDGTRIRLSGEGDAGIRGGPNGDLYIFLSVKPHEFFQREGADLHCRIPLSMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: SPJ1_SCHPO (DnaJ-related protein spj1 OS=Schizosaccharomyces pombe GN=spj1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 51/155 (32.90%), Postives = 77/155 (49.68%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPK-FKRKGDDLFVEHTLSLTEALCG-FQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMY-----QRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDE 444
            V  G   G +I F G+ADE P    GDI+ +L+       + RK +DL+ + T+S+ EAL G ++  I  LDG  + +K   GEVV P + + + ++GMP+Y     +     G  YI + V FP+ L     K L  +       +  D E DE
Sbjct:  232 VPAGAPEGYRIGFRGKADEIPGMEAGDIIVILEAAGGDYGWTRKDNDLYRKETISVREALLGNWKRKIQKLDGSFMEVKRSAGEVVHPGETERVKNQGMPIYNLHKGKTTSAHGSAYIEWEVKFPKKLKGKFLKDLNNLF------EKYDNEFDE 380          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEBR (DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKF---------------------------KRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCK 381
            VE G   G    F GE +   +   GD+ F ++ ++HP+F                           +RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++   D+ K
Sbjct:  211 VEVGADEGHTQIFHGEGEPHIEGDPGDLKFKIRIQKHPRFLISVTGIEIIELKVDELVELLLEGIRFERKGDDLYTNVTISLQDALNGFEMEILHLDGH--MVKVQRDKVTWPGARLRKKDEGMPSMENNNKKGMLIVTFDVEFPKTELTDEQK 362          
BLAST of CX295008 vs. ExPASy Swiss-Prot
Match: DNAJ_BARHE (Chaperone protein dnaJ OS=Bartonella henselae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 42/131 (32.06%), Postives = 71/131 (54.20%), Query Frame = 1
Query:    1 VEKGMQNGQKITFPGEADEA-PDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLE 390
            +  G+++  +I   GE D       +GD+   L  K H  F+R+G DL     +S+  A  G +F ++ LDG +  +K   G      QF+ +  +GMPM +R  +RG LYIH T++ P+ L+ +Q ++L+
Sbjct:  220 IPAGIEDSTRIRLSGEGDAGIRGGPSGDLYIFLSVKPHEFFQREGADLHCRVPISMVTAALGGEFEVSDLDGIKARVKIPEG-TQNGRQFR-LKGKGMPMLRRQQVRGDLYIHITIETPQKLTQEQRELLQ 348          
The following BLAST results are available for this feature:
BLAST of CX295008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
DJB11_CANFA4.450e-1634.65DnaJ homolog subfamily B member 11 OS=Canis famili... [more]
DJB11_RAT7.591e-1635.43DnaJ homolog subfamily B member 11 OS=Rattus norve... [more]
DJB11_MOUSE7.591e-1635.43DnaJ homolog subfamily B member 11 OS=Mus musculus... [more]
DJB11_BOVIN2.885e-1535.07DnaJ homolog subfamily B member 11 OS=Bos taurus G... [more]
DNAJ_BARQU7.855e-1333.59Chaperone protein dnaJ OS=Bartonella quintana GN=d... [more]
SPJ1_SCHPO2.286e-1232.90DnaJ-related protein spj1 OS=Schizosaccharomyces p... [more]
DNJ20_CAEBR3.899e-1231.17DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=... [more]
DNAJ_BARHE5.092e-1232.06Chaperone protein dnaJ OS=Bartonella henselae GN=d... [more]

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Properties
Property NameValue
Genbank descriptionC05065F01SK DroRLeaf1 Citrus clementina cDNA clone C05065F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295008 ID=CX295008; Name=CX295008; organism=Citrus clementina; type=EST; length=754bp
GTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTTCCCTGGAGAAGC
TGATGAAGCGCCCGACACTGTCACAGGTGACATTGTATTTGTTCTACAAC
AGAAAGAGCACCCGAAATTTAAGCGAAAGGGTGATGACCTATTTGTTGAG
CACACCCTGTCACTGACAGAAGCTCTCTGTGGCTTTCAATTTGTAATAAC
TCATTTGGATGGCCGGCAACTCCTCATCAAATCCCAGCCTGGGGAAGTAG
TCAAGCCGGACCAATTCAAGGCCATAAATGATGAAGGAATGCCTATGTAT
CAGAGGCCATTTATGAGGGGCAAACTGTACATTCATTTCACTGTTGACTT
CCCTGAGTCACTGAGCCCAGACCAGTGCAAGATGCTGGAGACCGTACTAC
CTCCAAGGACCTCAGTCCAGCTCACCGATATGGAACTGGATGAGTGTGAA
GAAACAACCCTGCATGATGTGAACATTGAGGAGGAAATGCGAAGGAAGCA
ACAAGCAGCTCAGGAGGCATACGATGAAGATGACGATATGCAAGGTGGTG
CCCAGAGAGTGCAGTGTGCTCAGCAGTGATGATGTAGAAGAAAAGGGGTG
GCCTGATTTAGTATTTTCATTGTTTGGGAGAAAAAGATTCTCAACATATT
TATTTTCTGTTATAGGCTTTAGAGGTTCTAGTTTTGGTTTGTCTGTCTTT
ATTCCTATGTTTTTCTGATAACTGACTATGTAATGGAATTCTAGCGTTGC
ACCT
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