CX295011

Overview
NameCX295011
Unique NameCX295011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.851e-18
Identity = 42/113 (37.17%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFIS 126          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.851e-18
Identity = 42/113 (37.17%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFIS 126          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.851e-18
Identity = 42/113 (37.17%), Postives = 74/113 (65.49%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFIS 126          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 40/113 (35.40%), Postives = 72/113 (63.72%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +G  +L  P  NKG AFT++ER    L GLLP  + + + Q  +  +    +   L K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS
Sbjct:   13 AGPAILEAPLINKGSAFTDEERVFFNLEGLLPHVIETIEEQASRAYDQYTNFTNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFIS 125          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 39/113 (34.51%), Postives = 72/113 (63.72%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +G  +L  P  NKG AFT++ER    L GLLP  + + + Q  +  +    +   L +++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+++   +RR +GL+IS
Sbjct:   13 AGPAILEAPLINKGSAFTDEERVFFNLEGLLPHVIETIEEQASRAYDQYTNFTNDLDRHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFIS 125          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.857e-16
Identity = 44/127 (34.65%), Postives = 73/127 (57.48%), Query Frame = 2
Query:  302 TEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQY-EVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYI 679
            T++Q+  P       G  LL  PR+NK  AFT +ER    +   LPP V + Q Q  +  +  +   + PLQK + + +L   N+ LFY L+  ++ E++P++YTPT G+A +++  I+R P+G Y+
Sbjct:    5 TKEQIECP-----LKGVTLLNSPRYNKDTAFTPEERQKFEISSRLPPIVETLQQQVDRCYDQYKAIGDEPLQKNLYLSQLSVTNQTLFYALISQHLIEMIPIIYTPTEGDAIKQFSDIYRYPEGCYL 126          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.082e-15
Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 2
Query:  356 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYI 679
            LL  P  NKG AFT++ER+A  L  LLPP V +   Q ++    +   + PL K   M  L  +N+ L++ L+  +++EL+P++YTPT G+A   Y   FR+P+G+++
Sbjct:  103 LLNSPLFNKGSAFTQEEREAFNLEALLPPQVNTLDEQLERSYKQLCYLKTPLAKNDFMTSLRVQNKVLYFALIRRHIKELVPIIYTPTEGDAIAAYSHRFRKPEGVFL 210          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15
Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 2
Query:  359 LRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            L  P  N+G+ FT  +R    L G LP AV++   Q +++ + ++     L + + + +L  R+E L++K+L D++ EL+PVVYTPTVGEA Q++   +R  +GL++S
Sbjct:   13 LSAPSLNRGVGFTHAQRRRLGLTGRLPSAVLTLDQQAERVWHQLQSLATELGRNLLLEQLHYRHEVLYFKVLADHLPELMPVVYTPTVGEAIQRFSDEYRGQRGLFLS 120          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.665e-14
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 2
Query:  356 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQG 670
            +L DP  NKG AFTE ER+   L GLLP  V + Q Q  +     +     L+K + +ME+   N  LFYKL   +V E +P+VY PT+ +  + Y  +F  PQG
Sbjct:    7 ILNDPFINKGTAFTEAEREELGLNGLLPAKVQALQEQVDQTYAQFQSKVSNLEKRLFLMEIFNTNHVLFYKLFSQHVVEFMPIVYDPTIADTIENYSELFVEPQG 111          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 2
Query:  356 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQ 667
            +L +P  NKG AFT KER    L GLLPP V + + Q ++           L+K   +ME+   N  LFY L   ++ E  PVVY PT+ +  + Y  +F  PQ
Sbjct:    6 ILNNPFLNKGTAFTMKERQELGLIGLLPPTVQTIEEQAEQTYEQYLTKPSDLEKRHFLMEIFNTNRTLFYYLFNKHIVEFNPVVYDPTIADTIENYSHLFVDPQ 109          
The following BLAST results are available for this feature:
BLAST of CX295011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_PSEAE8.851e-1837.17NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB8.851e-1837.17NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA88.851e-1837.17NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_SHESH1.972e-1735.40NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_SHEWM4.393e-1734.51NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAOX_SCHPO4.857e-1634.65NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]
MAOM_YEAST1.082e-1537.96NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MAOX_MYCTU5.370e-1537.04Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MLES_OENOE2.665e-1440.00Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MLES_LACLA6.144e-1137.50Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05065F04SK DroRLeaf1 Citrus clementina cDNA clone C05065F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295011 ID=CX295011; Name=CX295011; organism=Citrus clementina; type=EST; length=682bp
CAGTACAGCGCGCACTCGGAACCTCCACTTGAATCAATCAGTCAACTGAC
AACGACTTAGATTTTTTATATCTACACTGTACAGTTCGGACTCGTTTCTA
TTCTATGAGGCATTTAGCACGGCGAAAGTCAAGGGAGTGAGTGTTTGTTT
GTTTTCGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGA
GCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCG
AAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGC
CACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGT
ACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAG
AAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTAT
AAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATG
AAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAAT
GAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCC
AGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTA
TCTTCAGGCGTCCTCAGGGTCTATACATAAGT
back to top