CX295011

Overview
NameCX295011
Unique NameCX295011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length682
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24
Identity = 51/113 (45.13%), Postives = 78/113 (69.03%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            SG  LL  P  NKG AF+++ER A  L GLLPP   S + Q ++     R +E P+ K++ +  +++ NE LFY+LL D++EE++P++YTPTVG+AC+K+  I+R  +GL+IS
Sbjct:   13 SGPNLLETPLLNKGSAFSKEERAAFNLTGLLPPRYESIEEQAERAYMQYRSFETPINKHIYLRAIQDNNETLFYRLLTDHLEEMMPIIYTPTVGDACEKFSDIYRSSRGLFIS 125          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.265e-24
Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 2
Query:  356 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVP----------LQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +L DP  NKG AF+  ERD  ++RGLLPP V+S + Q  + M  +++ EV           L K+  +  L +RNE L+YK+L++N+EE  P+VYTPTVG  CQKY  +FRRP+G+Y S
Sbjct:   52 ILHDPWFNKGTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKRLEVQARDGPSDPYVLAKWRILNRLHDRNETLYYKVLMENIEEYAPIVYTPTVGLVCQKYSGLFRRPRGMYFS 170          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23
Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 2
Query:  332 ISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            ++  +G  +L DP+ NKG AFT  E+D   +RGL+PP   S + Q K+   ++ +   PL+K++ +  L+ RNE L+YK++++N  EL P++YTP VGEACQK+  IF + +G+Y S
Sbjct:   42 VTKKTGLDILNDPKLNKGSAFTADEKDRLGIRGLVPPRPQSLEAQYKRCKTNLDKISDPLEKFIYLNHLQNRNETLYYKMILENFVELAPIIYTPVVGEACQKFHKIFTQTRGMYFS 158          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOX_DICDI (NADP-dependent malic enzyme OS=Dictyostelium discoideum GN=malA PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23
Identity = 50/109 (45.87%), Postives = 74/109 (67.89%), Query Frame = 2
Query:  356 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +LR+P  NKG  F  +ER+   L+GLLPP V S Q Q  + ++    +   L++Y+ +  L +RNE LFY LL +N+E ++P++YTPTVGEACQK+G+ FR  QG+Y +
Sbjct:    8 ILRNPSANKGTGFNNEEREKLGLKGLLPPKVESLQEQSDRALSQFTSFNTNLERYIFLNCLRDRNETLFYYLLSNNLELMMPIIYTPTVGEACQKFGNEFRFAQGMYFA 116          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22
Identity = 55/122 (45.08%), Postives = 72/122 (59.02%), Query Frame = 2
Query:  347 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYE----------VPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            G  +L DP  NK   F   ERD   LRGLLPP VIS + Q  + M S R  E          V L K+  +  L +RNE L+Y++LIDN+++  P++YTPTVG  CQ Y  +FRRP+G+Y S
Sbjct:   32 GADILHDPWFNKDTGFPMTERDRLGLRGLLPPRVISFEQQYDRFMESFRSLEKNTEGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFS 153          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.723e-21
Identity = 45/113 (39.82%), Postives = 76/113 (67.26%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +GY LL  P  NKG AFT++ER    L GL+P  + + + Q ++       +   + K++ +  +++ NE LFY+L+ D++EE++P++YTPTVGEACQ++  I+RR +G++IS
Sbjct:   17 AGYTLLELPLLNKGSAFTQEERSHFNLHGLIPHVIETIEEQSQRSYQQYGAFNDDINKHIYLRNIQDTNETLFYRLINDHLEEMMPIIYTPTVGEACQRFSDIYRRHRGIFIS 129          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21
Identity = 48/113 (42.48%), Postives = 77/113 (68.14%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +G  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++     ++++  ++K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERANFNLHGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFIS 128          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 45/113 (39.82%), Postives = 76/113 (67.26%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            SG  LL  P  NKG AF+ +ERD+  L GLLP  + + + Q  +  + +R +   + K++ +  +++ NE LF+ L+  ++EE++P++YTPTVG+AC+K+  I+RR +GL+IS
Sbjct:   12 SGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSLRAYHQLRSFTTDIDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFIS 124          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 48/113 (42.48%), Postives = 77/113 (68.14%), Query Frame = 2
Query:  344 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +G  LL  P  NKG AFTE+ER    L GLLP AV + + Q ++     ++++  ++K+V +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+IS
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERADFNLAGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLNEMMPIIYTPTVGEACEHFSDIYRRARGLFIS 128          
BLAST of CX295011 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 51/119 (42.86%), Postives = 75/119 (63.03%), Query Frame = 2
Query:  356 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVP----------LQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYIS 682
            +L+DP  NKG AF+  ERD   LRGLLPP V++ + Q ++    +R  E+           L K+  +  L +RNE +F+K+LI+N+EE  P+V TPTVG  CQK+  ++RRP+G+Y S
Sbjct:   49 ILQDPWFNKGTAFSMTERDRLDLRGLLPPNVMTTEQQIERFTADLRVLELTTKDGPSDTYDLAKWRILNRLHDRNETMFFKVLIENIEEYAPIVSTPTVGLVCQKFSGLYRRPRGMYFS 167          
The following BLAST results are available for this feature:
BLAST of CX295011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_IDILO6.328e-2445.13NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAOM_SOLTU8.265e-2446.22NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAOH_NEOFR1.841e-2341.88Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAOX_DICDI5.357e-2345.87NADP-dependent malic enzyme OS=Dictyostelium disco... [more]
MAON_SOLTU1.559e-2245.08NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAO1_ACIAD1.723e-2139.82NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_PECCP3.839e-2142.48NAD-dependent malic enzyme OS=Pectobacterium carot... [more]
MAO1_PSYA25.014e-2139.82NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_ERWCT5.014e-2142.48NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAOM_AMAHP6.549e-2142.86NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05065F04SK DroRLeaf1 Citrus clementina cDNA clone C05065F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295011 ID=CX295011; Name=CX295011; organism=Citrus clementina; type=EST; length=682bp
CAGTACAGCGCGCACTCGGAACCTCCACTTGAATCAATCAGTCAACTGAC
AACGACTTAGATTTTTTATATCTACACTGTACAGTTCGGACTCGTTTCTA
TTCTATGAGGCATTTAGCACGGCGAAAGTCAAGGGAGTGAGTGTTTGTTT
GTTTTCGTTTTTGTGAAAAGCAGAAAAAGTAAAAAGAGTGAGAATGGAGA
GCACCATGAAGGAGATGAGAGACGGAGCTTCGGTTCTCGACTTCGACTCG
AAATCCACCGTCGAAGGCGGCGTTGAAGACGTCTACGGTGAGGATCGTGC
CACCGAGGACCAGCTCGTCACTCCCTGGACCATCTCTGTTGCCAGCGGGT
ACTGTTTGTTGAGGGATCCACGCCATAACAAAGGGCTTGCTTTCACTGAG
AAAGAGAGGGATGCCCACTACTTGCGCGGCCTTTTGCCTCCAGCTGTTAT
AAGTCAACAACTTCAGGAGAAGAAATTGATGAACAGCATCAGACAATATG
AAGTTCCGCTGCAAAAATATGTGGCCATGATGGAACTTGAGGAGAGAAAT
GAAAGACTGTTCTATAAGCTACTGATTGATAATGTTGAGGAACTTCTCCC
AGTCGTTTACACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGAAGTA
TCTTCAGGCGTCCTCAGGGTCTATACATAAGT
back to top