CX295013
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295013 vs. ExPASy Swiss-Prot
Match: PIPNB_PONAB (Phosphatidylinositol transfer protein beta isoform OS=Pongo abelii GN=PITPNB PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17 Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = 2 Query: 296 SKAPAWLKTFAPADALVMHEEAWNSYPRCKTVI--KCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTIDAPYWG 700 SK PA+++ AP +LV HE+AWN+YP C+T++ +C F + IET HK D G +NVH L ++ +DIA R A + D + F+S +T RGPL W+ P M AYKLVTI +WG Sbjct: 66 SKVPAFVRMIAPEGSLVFHEKAWNAYPYCRTIVTNEC-MKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHIDIAD--RSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANSPDCPQMCAYKLVTIKFKWWG 204
BLAST of CX295013 vs. ExPASy Swiss-Prot
Match: PITC1_HUMAN (Cytoplasmic phosphatidylinositol transfer protein 1 OS=Homo sapiens GN=PITPNC1 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.767e-17 Identity = 52/139 (37.41%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 296 SKAPAWLKTFAPADALVMHEEAWNSYPRCKTVIKCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYR 712 SK P+W + P V E+AWN YP T C + KFS+ IET ++ + G +D + + +E + R+V +DIA Y + D FKS++TGRG L EGW+D P+M +YKLVT+ WG R Sbjct: 66 SKLPSWARAVVPKIFYVT-EKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFD-NEAKDVEREVCFIDIACDEIPERYY---KESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTR 199
BLAST of CX295013 vs. ExPASy Swiss-Prot
Match: PITC1_DROME (Cytoplasmic phosphatidylinositol transfer protein 1 OS=Drosophila melanogaster GN=rdgBbeta PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.614e-17 Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 2 Query: 296 SKAPAWLKTFAPADALVMHEEAWNSYPRCKTVIKCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWG 700 S+ P W++ P V+ E++WN YP T C + K ++ I+T ++ +NG ++N +L+E++L R V+ LDIA D S D FKS++T RGPL EGW++ P+M +YK+V WG Sbjct: 67 SRLPYWIQAICPRVFYVI-EKSWNYYPYTLTEYTCSFIPKLNVLIKTKYEDNNGSTENCLDLTEDELKVRTVDHLDIAF---DEVSAKHYKKEEDPKFFKSEKTNRGPLIEGWRETDKPIMCSYKVVHASFEVWG 197
BLAST of CX295013 vs. ExPASy Swiss-Prot
Match: PITC1_XENTR (Cytoplasmic phosphatidylinositol transfer protein 1 OS=Xenopus tropicalis GN=pitpnc1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17 Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 2 Query: 296 SKAPAWLKTFAPADALVMHEEAWNSYPRCKTVIKCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYR 712 SK P+W + P V E+AWN YP T C + KFS+ IET ++ + G +DN+ SE + A R++ +DIA Y + D F S++TGRG L EGW++ P+M +YKLV + WG R Sbjct: 66 SKLPSWARAVVPKIFYVT-EKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDNIFE-SEAKDAEREICFVDIACDEIPERYY---KESEDPKNFVSEKTGRGQLKEGWREAQEPIMCSYKLVAVKFEVWGLQSR 199 The following BLAST results are available for this feature:
BLAST of CX295013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295013 ID=CX295013; Name=CX295013; organism=Citrus clementina; type=EST; length=712bpback to top |