CX295016

Overview
NameCX295016
Unique NameCX295016
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_BURCE (Glutathione reductase OS=Burkholderia cepacia GN=gor PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.645e-44
Identity = 98/231 (42.42%), Postives = 131/231 (56.71%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADVVLFATGRAP 705
            GGTCVIRGCVPKK+L+Y + +G   EDA  +GW         W  L+  K  EI RL G+Y+RL+ NA V++++G  +I GPN V VT       S SA+ ILIATG+R    P+ G  L ITSD+   L   P R  ++GGGYIA EFA I+ G+G  V  L R    LRGFDDE+R  +   L+  GI+L     +  + +    +      G+ +  D V+ ATGR P
Sbjct:   40 GGTCVIRGCVPKKLLMYASQYGQGFEDAAGFGWH-SAATSHSWTSLIAAKDAEIARLEGVYQRLIENANVEIFKGRAQIAGPNRVTVTGA-----SVSARTILIATGARPVMPPVAGANLMITSDDVFDLPVGPPRIAIIGGGYIACEFAGIFNGLGRHVVQLHRGSQVLRGFDDELREHLGDELKKSGIDLRLGVDVVAVERQRGALSVQLTTGDAMEVDAVMAATGRLP 264          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_ANASP (Glutathione reductase OS=Anabaena sp. (strain PCC 7120) GN=gor PE=3 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.515e-42
Identity = 94/234 (40.17%), Postives = 136/234 (58.12%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEE---IVADVVLFATGRAP 705
            GGTCVIRGCVPKK++VYG+ F    EDA  YGW+V  K + +W+  +     E+ RL+ ++   L  AGV+L  G   +V  + VEV +       ++A  ILIA G R  +  +PG E  ITS+E   L+  PK   ++G GYI  EFA I RG+GS V  + R +  L+GFD+++R  +   +   GI + P+  +  + +  EG+K I+  GE+   I+ADV L ATGR P
Sbjct:   39 GGTCVIRGCVPKKLMVYGSHFPALFEDAAGYGWQVG-KAELNWEHFITSIDKEVRRLSQLHISFLEKAGVELISGRATLVDNHTVEVGER-----KFTADKILIAVGGRPIKPELPGMEYGITSNEIFHLKTQPKHIAIIGSGYIGTEFAGIMRGLGSQVTQITRGDKILKGFDEDIRTEIQEGMTNHGIRIIPKNVVTAIEQVPEGLK-ISLSGEDQEPIIADVFLVATGRVP 265          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_HAEIN (Glutathione reductase OS=Haemophilus influenzae GN=gor PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.317e-40
Identity = 93/233 (39.91%), Postives = 132/233 (56.65%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELED-ARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGE-EIVADVVLFATGRAP 705
            GGTCV  GCVPKK++ YGA     + + A  YG++V  K  FD+ KL++ +   I R++  Y  +L+   + +  G GK V  + +EVT  DGTK   +A HILIATG R  R  I GQE  I SD   +L ELPKRA V+G GYIAVE + +   +G    LL R+  P+R  D  +   +   L   GI LH  +T  E++K+ +G   +   G+ ++  D V++A GR P
Sbjct:   39 GGTCVNVGCVPKKVMFYGAHIAEAINNYAPDYGFDVEVK-KFDFSKLIESRQAYISRIHTSYNNVLAKNNIDVINGFGKFVDAHTIEVTLADGTKEQVTADHILIATGGRPYRPNIKGQEYGIDSDGFFALTELPKRAAVIGAGYIAVELSGVLNSLGVETHLLVRRHAPMRNQDPLIVETLVEVLAQDGIQLHTNSTPSEIVKNADGSLTVRCDGQSDVTVDCVIWAAGRVP 270          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_NEUCR (Glutathione reductase OS=Neurospora crassa GN=glr-1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.502e-39
Identity = 92/237 (38.82%), Postives = 128/237 (54.01%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT---DHGEEIVADV--VLFATGRAP 705
            GGTCV  GCVPKK+  Y A     +  A+ YG+ V +   FDW    QK+   + RLNGIY+R L+N  V+   G  K++ PN VEVT  DGTK   +AK ILIA G      P IPG E    SD    ++ LPK+  ++G GYIAVEFA +   +G    L  R +  LR FD  ++ V  +  E  G+ +H ++ +  + K   G   I      GE+ ++DV  +++A GR P
Sbjct:   43 GGTCVNVGCVPKKVTFYAALVAETIHQAKDYGFSVEQTAPFDWPTFKQKRDAYVARLNGIYERNLANDKVEYVHGWAKLLSPNSVEVTLDDGTKSVVNAKKILIAVGGNPTIPPHIPGSEYGTNSDGFFDIDTLPKKVALVGAGYIAVEFAGMLNALGVETHLFIRHDTFLRSFDPMIQQVSVKEYERIGVKVHKKSQLTSVQKDAAGKLAINFKEGEGEQSISDVDHLIWAVGRTP 279          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_ASHGO (Glutathione reductase OS=Ashbya gossypii GN=GLR1 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38
Identity = 93/239 (38.91%), Postives = 133/239 (55.65%), Query Frame = 1
Query:    7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGW--EVH---EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITDHGEEIVADV--VLFATGR 699
            A GGTCV  GCVPKK++ Y +     L  AR YG   EV    EK+ F+WK+   K+   + RLNGIY+R L+  GV+   G  +     +VEVT+ D T   Y+A HILIATG        IPG E  + SD    LEE PK+ V+ G GYIA EFA ++ G+G+   ++ RK+  L  FD  ++ +V  + E  G+N+H + +I+ + K     K       +I+ DV  +++A GR
Sbjct:   54 ALGGTCVNVGCVPKKVMWYASDLAHRLLHARDYGLLQEVDISKEKLHFNWKEFAGKRNAYVERLNGIYERNLAKEGVEYVHGWARFNSEGQVEVTRPDQTTEKYTADHILIATGGEPVLPEGIPGAEYGVDSDGFFRLEEQPKKVVISGSGYIATEFAGVFNGLGTETHIVIRKDHVLTKFDPSIQEIVTEHYEKEGVNIHKKESIQRVEKDPNTGKLTVHLSGKIIEDVDQLVWAIGR 292          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TYTR_CRIFA (Trypanothione reductase OS=Crithidia fasciculata GN=TPR PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.190e-36
Identity = 87/244 (35.66%), Postives = 139/244 (56.97%), Query Frame = 1
Query:    4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEV-HEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQL----DGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT-DHGEEIVADVVLFATGRAP 705
            +A GGTCV  GCVPKK++V GA++   + ++  +GWE+  E +  +WK L+  K   +  +N  Y+ + ++  G+  ++G G +   + V V +          +   ++IL+ATGS  Q   I G +L ITS+EA  L+E PKRA+ +GGGYI++EFA I   ++  G  VDL +R ++ LRGFD E+R  +   L   GIN+       ++ K+ +G + +  + G E   DVV+ A GR P
Sbjct:   46 AALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIEGDDLCITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVP 289          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TYTR_TRYBB (Trypanothione reductase OS=Trypanosoma brucei brucei GN=TPR PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36
Identity = 90/244 (36.89%), Postives = 135/244 (55.33%), Query Frame = 1
Query:    4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVH-EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQL----DGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT-DHGEEIVADVVLFATGRAP 705
            +A GGTCV  GCVPKK++V GA +   L ++  +GWE     +  +WKKL+  K + +L +N  Y+ + ++  G+  + G G +   N V V +        K    A HIL+ATGS  Q   IPG E  I+S+EA  L E P+R + +GGG+I+VEFA I   ++  G  V L +R  L LRGFD+ +R  V + L   GI +       ++  + +G K +T + G+ +  DVV+ A GR P
Sbjct:   46 AALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGSWPQMPAIPGVEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIP 289          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_DICDI (Glutathione reductase OS=Dictyostelium discoideum GN=gsr PE=3 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 89/237 (37.55%), Postives = 137/237 (57.81%), Query Frame = 1
Query:   13 GGTCVIRGCVPKKILVYGASFGGELEDAR-SYGWEVH-EKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRI---TDHGEEI-VADVVLFATGRAP 705
            GGTCV  GCVPKK++ +  SF  E+ +A  SYG++   +++ F+W  + + + + I RLNGIY   L+   +    G G+  GP E++V   +G K  Y+A HILIA G R     +PG+EL ITSD    LE+LPK  +V+G GYIAVE A +   +GS   ++ R++  LR FD+ +   + + +   G+      +IK L +  +G KRI   T+ G ++   + V++A GR P
Sbjct:   47 GGTCVNVGCVPKKVM-WNTSFIKEMINAAPSYGFDFGGQQVKFNWPTIKKARDEYIKRLNGIYDSNLAKDNIVRINGYGRFSGPKEIQVNGANGEK--YTADHILIAAGGRPTVPDVPGKELGITSDGFFELEDLPKSTLVVGAGYIAVELAGVLHSLGSETTMVIRQKQFLRTFDEMLHTTLLKQMTDDGVKFVTEASIKSLERDVDG-KRIIATTNAGVKLPPVECVIWAIGRVP 279          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCO (Trypanothione reductase OS=Trypanosoma congolense GN=TPR PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.481e-34
Identity = 89/244 (36.48%), Postives = 136/244 (55.74%), Query Frame = 1
Query:    4 SAEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEK-IDFDWKKLLQKKTDEILRLNGIYKRLLSNA-GVKLYEGEGKIVGPNEVEVTQ----LDGTKLSYSAKHILIATGSRAQRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASI---WRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT-DHGEEIVADVVLFATGRAP 705
            +A GGTCV  GCVPKK++V GA +  +L ++  +GWE     I  +WK L+  K   +L +N  Y+ +  +  G++ + G G +   N V V +        K    A+HI+IATGS  Q   IPG E  I+S+EA  LEE P+R + +GGG+I+VEFA I   ++ +G  V L +R    LRGFD  +R  + + L   GI++       ++  + +G K +T + G+ +  DVV+ A GR P
Sbjct:   46 AALGGTCVNVGCVPKKLMVTGAQYMDQLRESAGFGWEFDASTIKANWKTLIAAKNAAVLDINKSYEDMFKDTEGLEFFLGWGALEQKNVVTVREGADPKSKVKERLQAEHIIIATGSWPQMLKIPGIEHCISSNEAFYLEEPPRRVLTVGGGFISVEFAGIFNAYKPVGGKVTLCYRNNPILRGFDYTLRQELTKQLVANGIDIMTNENPSKIELNPDGSKHVTFESGKTLDVDVVMMAIGRLP 289          
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: GSHR_KLULA (Glutathione reductase OS=Kluyveromyces lactis GN=GLR1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.240e-34
Identity = 80/213 (37.56%), Postives = 117/213 (54.93%), Query Frame = 1
Query:    7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWE-----VHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRA-QRAPIPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSE 627
            A GGTCV +GCVPKK++ Y +     +  A SY          E + F+W +  +K+   I RLNGIY+R L+  GV    G        +V+V + D    +Y+A HIL+ATG +    A IPG +  ++SDE   LE+ PK+ VV+G GYI VE A ++ G+GS   L+ R E  LR FDD ++  V       G+N+H  + + ++ K E
Sbjct:   55 AMGGTCVNKGCVPKKVMWYASDLATRIGHAHSYNLFEDLPLTKENLTFNWPEFKKKRDAYIHRLNGIYERNLTKEGVDYVYGWASFTVDGKVQVKKADNCTETYTADHILVATGGKPIYPAKIPGYDYGVSSDEFFELEDQPKKVVVVGAGYIGVEIAGVFNGLGSDSHLVIRGETVLRKFDDCIQETVTDTYIKEGVNIHKSSNVTKVEKDE 267          
The following BLAST results are available for this feature:
BLAST of CX295016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
GSHR_BURCE2.645e-4442.42Glutathione reductase OS=Burkholderia cepacia GN=g... [more]
GSHR_ANASP5.515e-4240.17Glutathione reductase OS=Anabaena sp. (strain PCC ... [more]
GSHR_HAEIN2.317e-4039.91Glutathione reductase OS=Haemophilus influenzae GN... [more]
GSHR_NEUCR1.502e-3938.82Glutathione reductase OS=Neurospora crassa GN=glr-... [more]
GSHR_ASHGO3.699e-3838.91Glutathione reductase OS=Ashbya gossypii GN=GLR1 P... [more]
TYTR_CRIFA1.190e-3635.66Trypanothione reductase OS=Crithidia fasciculata G... [more]
TYTR_TRYBB4.522e-3636.89Trypanothione reductase OS=Trypanosoma brucei bruc... [more]
GSHR_DICDI8.528e-3537.55Glutathione reductase OS=Dictyostelium discoideum ... [more]
TYTR_TRYCO2.481e-3436.48Trypanothione reductase OS=Trypanosoma congolense ... [more]
GSHR_KLULA3.240e-3437.56Glutathione reductase OS=Kluyveromyces lactis GN=G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05065F09SK DroRLeaf1 Citrus clementina cDNA clone C05065F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295016 ID=CX295016; Name=CX295016; organism=Citrus clementina; type=EST; length=706bp
GATTCGGCCGAGGGTGGAACCTGTGTCATTCGTGGTTGTGTACCCAAAAA
GATATTGGTCTATGGAGCATCATTTGGAGGTGAACTTGAGGATGCAAGGA
GTTATGGATGGGAGGTACACGAGAAAATTGACTTCGACTGGAAAAAACTT
CTGCAAAAGAAGACAGATGAGATACTCAGATTAAATGGAATTTACAAGCG
ATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGAGGGAAAGATAG
TTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCACTAAGTTAAGT
TACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGGGCTCAACGTGC
TCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGAGGCATTGAGCT
TGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAGGGTACATTGCT
GTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACTGTGGATCTATT
ATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGAAATGCGGGCAG
TAGTTGCCAGAAATCTGGAAGGGAGGGGAATTAATTTGCACCCGAGGACT
ACCATAAAGGAGTTGATTAAGTCAGAGGAGGGTGTAAAACGTATTACAGA
TCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCCACTGGCAGGG
CACCTA
back to top