CX295016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 76/244 (31.15%), Postives = 118/244 (48.36%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFG--GELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG----QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLL-FRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRIT------DHGEEIVADVVLFATGRAP 705 GGTC+ GC+P K L+ + + +D S G E+ E + + K++++K+ + L G L V G GKI G N+V T+ DG K+ILIATGS P PG ++ ++S ALSL+++P++ VV+G G I VE S+W+ +G+ V + F + G D E+ R L+ +G T + K +G ++ E I DV+L GR P Sbjct: 77 GGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEV--TPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRP 317
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_HALVO (Dihydrolipoyl dehydrogenase OS=Halobacterium volcanii GN=lpdA PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 77/242 (31.82%), Postives = 125/242 (51.65%), Query Frame = 1 Query: 7 AEGGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVT---QLDGTKLSYSAKHILIATGSRAQRAP--IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEG--VKRITDHGE--EIVADVVLFATGRAP 705 A GGTC+ GC+P K L+ GA+ E +A G +H D +L K+ + +L G ++L GV L EG + N V + + G++ + +H +IATGSR + P G E +S +AL + +P+R VV+GGGYI +E ++ + +G+ V ++ + L G++ ++ VV + E GI++H + ++G V T+ GE E AD VL A GR+P Sbjct: 42 AYGGTCLNYGCIPSKALITGANLAHEAGNAEEMG--IHADPVVDMSQLRDWKSGVVDQLTGGVEKLCKANGVNLVEGTARFKDENAVRIAHGGEGQGSE-TIEFEHCIIATGSRVIQIPGFDFGDEPVWSSRDALEADTVPERLVVVGGGYIGMELSTTFAKLGADVTVVEMLDDILPGYESDVARVVRKRAEELGIDMHLGEGATGWREEDDGIMVTTETEDGEENEYRADKVLVAVGRSP 280
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_ZYMMO (Dihydrolipoyl dehydrogenase OS=Zymomonas mobilis GN=lpd PE=3 SV=3) HSP 1 Score: 103.99 bits (258), Expect = 8.279e-22 Identity = 68/211 (32.23%), Postives = 111/211 (52.61%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP---IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGV 636 GG C+ GC+P K L+ A E+++A +YG K DFD K++ + + RL K LL V++ G G++ G ++ V +G + AK I+IATG+RA++ P G+ + T AL +PK+ +V+G G I +EFAS + G+ V ++ L D E+ A VA+ + RGI + ++ ++ L +EGV Sbjct: 39 GGICLNWGCIPTKSLLRSAEVYHEMQNAEAYGLTSF-KPDFDLDKIIARSREVATRLASGVKTLLRKNKVEVISGVGQLTGNQQMLVETTEGEEKILEAKDIIIATGARARQLPNVHSDGKHIW-TYHHALKPPAMPKKLLVIGSGAIGIEFASFYADFGAEVSIVEHAPQILPMEDAEVSAYVAKAFKKRGIRILTQSALQNLTPDDEGV 247
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_STAAW (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=pdhD PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITD-HGEE--IVADVVLFATGRAP 705 GG C+ GC+P K L++ + E + + + G + E + +++K+ + K+ + +L G + LL V + +GE V N + V + + +Y+ K+ +IATGSR P + I S AL+L+E+P + VV+GGGYI E + + GS V +L + L GF+ +M V + ++ +G+ + K +++ GVK + GEE I AD VL GR P Sbjct: 44 GGVCLNVGCIPSKALLHASHRFVEAQHSENLG-VIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP 276
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_STAAU (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus GN=pdhD PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITD-HGEE--IVADVVLFATGRAP 705 GG C+ GC+P K L++ + E + + + G + E + +++K+ + K+ + +L G + LL V + +GE V N + V + + +Y+ K+ +IATGSR P + I S AL+L+E+P + VV+GGGYI E + + GS V +L + L GF+ +M V + ++ +G+ + K +++ GVK + GEE I AD VL GR P Sbjct: 44 GGVCLNVGCIPSKALLHASHRFVEAQHSENLG-VIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP 276
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_STAAS (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=pdhD PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITD-HGEE--IVADVVLFATGRAP 705 GG C+ GC+P K L++ + E + + + G + E + +++K+ + K+ + +L G + LL V + +GE V N + V + + +Y+ K+ +IATGSR P + I S AL+L+E+P + VV+GGGYI E + + GS V +L + L GF+ +M V + ++ +G+ + K +++ GVK + GEE I AD VL GR P Sbjct: 44 GGVCLNVGCIPSKALLHASHRFVEAQHSENLG-VIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP 276
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_STAAR (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=pdhD PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITD-HGEE--IVADVVLFATGRAP 705 GG C+ GC+P K L++ + E + + + G + E + +++K+ + K+ + +L G + LL V + +GE V N + V + + +Y+ K+ +IATGSR P + I S AL+L+E+P + VV+GGGYI E + + GS V +L + L GF+ +M V + ++ +G+ + K +++ GVK + GEE I AD VL GR P Sbjct: 44 GGVCLNVGCIPSKALLHASHRFVEAQHSENLG-VIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP 276
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_STAAN (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain N315) GN=pdhD PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITD-HGEE--IVADVVLFATGRAP 705 GG C+ GC+P K L++ + E + + + G + E + +++K+ + K+ + +L G + LL V + +GE V N + V + + +Y+ K+ +IATGSR P + I S AL+L+E+P + VV+GGGYI E + + GS V +L + L GF+ +M V + ++ +G+ + K +++ GVK + GEE I AD VL GR P Sbjct: 44 GGVCLNVGCIPSKALLHASHRFVEAQHSENLG-VIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP 276
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_STAAM (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhD PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITD-HGEE--IVADVVLFATGRAP 705 GG C+ GC+P K L++ + E + + + G + E + +++K+ + K+ + +L G + LL V + +GE V N + V + + +Y+ K+ +IATGSR P + I S AL+L+E+P + VV+GGGYI E + + GS V +L + L GF+ +M V + ++ +G+ + K +++ GVK + GEE I AD VL GR P Sbjct: 44 GGVCLNVGCIPSKALLHASHRFVEAQHSENLG-VIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP 276
BLAST of CX295016 vs. ExPASy Swiss-Prot
Match: DLDH_STAAC (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain COL) GN=pdhD PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.081e-21 Identity = 72/235 (30.64%), Postives = 122/235 (51.91%), Query Frame = 1 Query: 13 GGTCVIRGCVPKKILVYGASFGGELEDARSYGWEVHEKIDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVARNLEGRGINLHPRTTIKELIKSEEGVKRITD-HGEE--IVADVVLFATGRAP 705 GG C+ GC+P K L++ + E + + + G + E + +++K+ + K+ + +L G + LL V + +GE V N + V + + +Y+ K+ +IATGSR P + I S AL+L+E+P + VV+GGGYI E + + GS V +L + L GF+ +M V + ++ +G+ + K +++ GVK + GEE I AD VL GR P Sbjct: 44 GGVCLNVGCIPSKALLHASHRFVEAQHSENLG-VIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMD-EKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRP 276 The following BLAST results are available for this feature:
BLAST of CX295016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295016 ID=CX295016; Name=CX295016; organism=Citrus clementina; type=EST; length=706bpback to top |