CX295017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.568e-20 Identity = 60/199 (30.15%), Postives = 103/199 (51.76%), Query Frame = 1 Query: 133 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 699 +V DNG G++KAG G+ P V P+ + +P + + + DE ++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI R+DL G+ T+ L ++++ R Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR 200
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20 Identity = 60/200 (30.00%), Postives = 103/200 (51.50%), Query Frame = 1 Query: 133 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI---LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 699 +V DNG G++KAGF GD P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++FE ++ VA +++ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+ L ++++ R Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYR 199
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20 Identity = 60/200 (30.00%), Postives = 103/200 (51.50%), Query Frame = 1 Query: 133 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI---LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 699 +V DNG G++KAGF GD P AV P+ + +P G K V D+ Q++ +TL+ PI+ G + N + ++W N L+V P +LL E NP A + +++FE ++ VA +++ LY + R +V+D G +H P+ + + L +A+ R+DL G+ LT+ L ++++ R Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYR 199
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.957e-20 Identity = 53/182 (29.12%), Postives = 97/182 (53.30%), Query Frame = 1 Query: 118 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 657 E+I LV D G+ + G+AG+++P + PS + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE +VPA Y+ QAV +A+ ++T +++D G + P+ +G + I + LAG Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAG 183
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.601e-19 Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 106 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------------MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 465 M +++ +V D G+ KAG+AG+DAP+AVFPS+VG G+ + G++ Y G +A + +R + + P + GIV++WD ++ +W H F N L + P EHP+LL E PLN + REK Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP4_ASPFU (Actin-related protein 4 OS=Aspergillus fumigatus GN=arp4 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.767e-17 Identity = 60/220 (27.27%), Postives = 100/220 (45.45%), Query Frame = 1 Query: 118 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA-QSKRGILTLKYPI-EHGIVSNWDDMEKIWHHTFYNELR--------------------------VAPEE-----HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 678 ++I +V D G +AGFAG+D P++V P+ G+ + Q+ GD+ + R L++ P+ G+V +WD EK+W ++F + L V EE P+L+TE NP REK +I E + PA Y+A VL+ +A+G+ + +V+D G P+++G L + L G ++ L Sbjct: 9 DEISAIVLDPGFSTTRAGFAGEDTPKSVIPTYYGKYTYE------AQEKLIFGDDIFVTPRPGLSIHNPMGRDGVVEDWDMAEKVWEYSFTSRLTGPKAGNPFQNGLNDVANGELPSEMEGVETEEKPLADSPLLMTECGWNPTKAREKTVEIAMEKWGTPAFYLARNGVLAAFAAGKASALVVDVGASNISVTPVHDGMILKRGVQHSPLGGDYISSQL 222
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP6_NEUCR (Actin-like protein arp-6 OS=Neurospora crassa GN=arp-6 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16 Identity = 64/214 (29.91%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 133 LVCDNGTGMVKAGFAGDDA----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNEL---RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS----GRTTGIVLDS--------GDGVSHTV--PIYEGYALPHAILRLDLAGRDLTDALMKILTERGY 705 LV DNG +KAGF DD PR + P+ + R RH + YVG E + + L + P+E G + NW+ ++IW F+++ + P + ++LTE P + + + QI+FE + + Y + V + Y RT +DS G SHT PI +G L AI RLD+ G+ +T+ L ++L+ R + Sbjct: 22 LVLDNGADTIKAGFVSDDKSDGKPR-IIPNCLARDRHRKI---------YVGSELEKCKDFSELAFRRPVEKGFIVNWEAQKEIWDREFFDDKAAQKCDPSDTRLILTEQPNSLPSLQTHCDQIVFEEYGFASYYRGLGPVFNAYRDIQSIFRTPQSTIDSPAQVILLIDSGYSHTTVTPILQGRPLHPAIRRLDVGGKLMTNYLTRLLSVRHF 225
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP4_EMENI (Actin-related protein 4 OS=Emericella nidulans GN=arp4 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.793e-16 Identity = 55/213 (25.82%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 118 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA-QSKRGILTLKYPI-EHGIVSNWDDMEKIWHHTFYNELRVAP-------------------------------EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 657 +++ +V D G +AGFAG+D P+++ P+ G+ GQ+ GD+ + R L++ P+ G+V +WD EK+W ++F + L A + P+L++E NP REK +I E + PA Y+A VL+ +A+G+ + +V+D G P+++G L + L G Sbjct: 15 DEVSAIVLDPGFSTTRAGFAGEDTPKSLVPTYYGKYSFE------GQEKLIFGDDVFVTPRPSLSVGNPMGRDGVVEDWDMAEKLWEYSFTSRLTGAKPSNPLHNGLNDLVEGELPTEMEGVETNEKPLADSPLLMSECSWNPTKAREKTIEIAMEKWGTPAFYLARNGVLASFAAGKASALVVDIGASNISVTPVHDGMVLKRGVQHSPLGG 221
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP4_KLULA (Actin-related protein 4 OS=Kluyveromyces lactis GN=ARP4 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16 Identity = 54/195 (27.69%), Postives = 94/195 (48.21%), Query Frame = 1 Query: 118 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 699 ++I +V D G+ + G++G D P+++ PS G G K + R + +K +E+ + +WD ++ W + +L+ + PVLLTE N +A+R+K +I+ E+ A Y+A + +A GR T +V+D G VS P+ +G L + R +AG+ L + K L R Sbjct: 12 DEINAIVIDPGSFVTNIGYSGTDCPQSIMPSSYGNVETDG-----DTKRIFNEQPLLFPRAGMEIKPIVENSTIVDWDRAQEQWEYALNTDLKFESNKGTPVLLTEPIWNSEASRKKSLEILLESMEFEACYLAANSSAVSFAMGRPTCLVVDIGHDVSTVSPVIDGMTLSKSSTRNYVAGKYLNHLIAKNLKPR 201
BLAST of CX295017 vs. ExPASy Swiss-Prot
Match: ARP4_ASHGO (Actin-related protein 4 OS=Ashbya gossypii GN=ARP4 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.059e-16 Identity = 55/196 (28.06%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 118 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 699 ++I +V D G+ G++G D P+A+ PS G+ G+KD +++ R + +++G V +W+ EK W +ELR P LLTE N + NR+K +++ E+ + A Y+ A +A GR T +V+D G V+ P+ +G L + +R +AG L + + L R Sbjct: 12 DEITAVVIDPGSFTTNIGYSGTDCPQAILPSCYGKYTE-------GEKDELFSEQSIGLPRKDYEIHNIVQNGEVVDWEKAEKQWDWAIRSELRFETNSGMPALLTEPIWNSEENRKKSLEVLLESMDFSACYLVPTATAVSFAMGRPTCLVVDIGHDVTSVCPVVDGMTLSKSSMRSYIAGSLLNELIRSQLAPR 200 The following BLAST results are available for this feature:
BLAST of CX295017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295017 ID=CX295017; Name=CX295017; organism=Citrus clementina; type=EST; length=711bpback to top |