CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.052e-87
Identity = 153/243 (62.96%), Postives = 189/243 (77.78%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V G+GPTAGAA++ HMD+DK+SFTG  + GK+++E A K+NLK VTLELGGKSP IIF DAD+D+A E AH  LFY+QGQCC AGSR +V E +YDEFV ++  RA +  +GDP   GV+QGPQID EQF+K+L  I SG +  A LECGG   GN+GYF+QPTVFS+V DDM IA++EIFGPVQ I+KFK  D+VI+RAN T +GLAA VFTK  D A T   AL+AGTVW+
Sbjct:  220 AGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAGKTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWV 462          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 2.681e-87
Identity = 151/243 (62.14%), Postives = 190/243 (78.19%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK+++E A KSNLK V+LELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV QGPQID EQ+EK+L  I SG +  A LECGG   GN+GYF+QPTVFSDV DDM IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FT   D A T+  AL++GTVW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWV 454          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 321.627 bits (823), Expect = 2.681e-87
Identity = 151/243 (62.14%), Postives = 190/243 (78.19%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK+++E A KSNLK V+LELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV QGPQID EQ+EK+L  I SG +  A LECGG   GN+GYF+QPTVFSDV DDM IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FT   D A T+  AL++GTVW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWV 454          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.572e-87
Identity = 150/243 (61.73%), Postives = 191/243 (78.60%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMD+DK++FTG  + GK+++E A KSNLK VTLELGGKSPFI+F DAD++ A+E+ H ALFY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV QGPQID EQ++K+L  I SG +  A LECGG   GN+GYF+QPTVFS+V D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL AG FTK  D A T+  AL+AGTVW+
Sbjct:  211 AGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPFIVFADADLETALEVTHQALFYHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVSDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLFAGSFTKDLDKAITVSAALQAGTVWV 453          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.972e-87
Identity = 157/243 (64.61%), Postives = 189/243 (77.78%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+NVV G+GPTAGAA+ASH DVDK++FTG  + G ++Q  A +SNLK VTLELGGKSP II  DAD+D AVE AHFALF+NQGQCC AGSRT+V E VY EFVE++ ARA  R+VG+PF S  EQGPQ+D  QF KVL YI+SG E  A L CGG    +RGYF+QPTVF DV+D M IA++EIFGPV  ILKFK  ++V+ RAN +++GLAA VFTK  D AN + +AL+AGTVWI
Sbjct:  211 AGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGRSNLKKVTLELGGKSPNIIVSDADMDWAVEQAHFALFFNQGQCCGAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQGPQVDETQFNKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTVWI 453          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 320.472 bits (820), Expect = 5.972e-87
Identity = 152/243 (62.55%), Postives = 190/243 (78.19%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG    GK+++E A KSNLK VTLELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E VYDEFV+++  RA + ++G+P   G+ QGPQID EQ +K+L  I SG +  A LECGG R GN+G+FVQPTVFS+V D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GLAAG+FTK  D A T+  AL+AG VW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAGVVWV 454          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 5.972e-87
Identity = 152/243 (62.55%), Postives = 190/243 (78.19%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMD+DK++FTG  + GK+++E A KSNLK VTLELGGKSP I+  DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + I+G+P   GV QGPQID EQ++K+L  I SG +  A LECGG   GN+GYFVQPTVFS+V D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AGVFTK  D A T+  AL+AGTVW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWV 454          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.964e-86
Identity = 149/243 (61.32%), Postives = 189/243 (77.78%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMD+DK++FTG  + GK+++E A KSNLK VTLELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P    V QGPQID EQ+ K+L  I SG +  A LECGG   GN+GYF+QPTVFS+V D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FTK  D A T+  AL+AGTVW+
Sbjct:  207 AGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLSAGIFTKDLDKAVTVSSALQAGTVWV 449          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.603e-86
Identity = 151/243 (62.14%), Postives = 188/243 (77.37%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAG A++SHMD+DK+SFTG  + GK+++E A KSNLK VTLELGGKSP I+F DAD+D AVE AH  +F++QGQ C A SR +V E +YDEFV ++  RA + I+G+P  SG+ QGPQID EQ  K+L  I SG +  A LECGG R GN+G+FVQPTVFS+V D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GLAAGVFTK  D A T+  AL+AG VW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGGAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEFAHQGVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKYILGNPLNSGINQGPQIDKEQHNKILGLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAGMVWV 454          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 317.005 bits (811), Expect = 6.603e-86
Identity = 150/243 (61.73%), Postives = 188/243 (77.37%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMD+DK++FTG  + GK+++E A KSNLK VTLELGGKSP I+  DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + I+G+P   G  QGPQID EQ++K+L  I SG +  A LECGG   GN+GYFVQPTVFS+V D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AGVFT   D A T+  AL+AGTVW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGATQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTNDIDKAVTISSALQAGTVWV 454          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1A1_CHICK2.052e-8762.96Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
AL1A1_SHEEP2.681e-8762.14Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]
AL1A1_BOVIN2.681e-8762.14Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
AL1A1_HORSE4.572e-8761.73Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
ALDH2_HORSE5.972e-8764.61Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
AL1A1_MOUSE5.972e-8762.55Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
AL1A1_HUMAN5.972e-8762.55Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A1_RABIT2.964e-8661.32Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
AL1A7_MOUSE6.603e-8662.14Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
AL1A1_MACFA6.603e-8661.73Retinal dehydrogenase 1 OS=Macaca fascicularis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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