CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9488 contig Ccv1_Contig9488:153..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.165e-82
Identity = 146/243 (60.08%), Postives = 184/243 (75.72%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK++QE AAKSNLK VTLELG K+P I+F DAD+D AVE AH  +F NQGQ C A S+ +V E +YDEFV+++  RA + + G+P   GV  GPQI+  Q  K++  I SG +  A LECGG   GN+GYF+QPTVFS+V DDM IA++EIFGPVQ I+KFK  D+VI+RAN T +GL AGVFTK  D A T+  AL+AGTVW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWV 454          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.522e-82
Identity = 145/243 (59.67%), Postives = 184/243 (75.72%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYGPTAGAA++SHMDVDK++FTG  + GK++QE AAKSNLK VTLELG K+P I+F DAD+D AVE AH  +F NQGQ C A S+ +V E +YDEFV+++  RA + + G+P   GV  GPQI+  Q  K++  I SG +  A LECGG   GN+GYF+QPT+FS+V DDM IA++EIFGPVQ I+KFK  D+VI+RAN T +GL AGVFTK  D A T+  AL+AGTVW+
Sbjct:  212 AGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEETIYDEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTIFSNVTDDMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTVWV 454          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 7.071e-80
Identity = 135/243 (55.56%), Postives = 185/243 (76.13%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+NV+SG+G  AGAAL+SHMDVDK++FTG    G+ + + AA SNLK VTLELGGKSP I+F+DAD+D A+   +F +F+N GQCCCAGSR YV E +YD+FV+K K RA + +VGDPF +   QGPQ+   QF++++ YI++G ++ AT+E GG R G++GYF++PT+FS+V +DM I ++EIFGPV SI KFK  +D I+  N + +GLAA V TK+ +TA  +  AL+AGTVW+
Sbjct:  206 AGFPPGVINVISGFGKVAGAALSSHMDVDKVAFTGSTVVGRTILKAAASSNLKKVTLELGGKSPNIVFEDADIDNAISWVNFGIFFNHGQCCCAGSRVYVQESIYDKFVQKFKERAQKNVVGDPFAADTFQGPQVSKVQFDRIMEYIQAGKDAGATVETGGKRKGDKGYFIEPTIFSNVTEDMKIVKEEIFGPVCSIAKFKTKEDAIKLGNASTYGLAAAVHTKNLNTAIEVSNALKAGTVWV 448          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A3_MOUSE (Aldehyde dehydrogenase family 1 member A3 OS=Mus musculus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.333e-78
Identity = 140/242 (57.85%), Postives = 183/242 (75.62%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            G PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGGK+P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++   A +R VGDPF +  EQGPQID +QF+K+L  I SG +  A LECGG  + +RG F++PTVFSDV D+M IA++EIFGPVQ ILKFK  ++VI+RAN T +GL A VFTK+ D A  +  AL +GTVWI
Sbjct:  224 GFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVREAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLAAALESGTVWI 465          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 291.967 bits (746), Expect = 2.275e-78
Identity = 138/243 (56.79%), Postives = 181/243 (74.49%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG P GV+NV+SG+G TAGAA++SHMD+DK++FTG    G+ + + AAKSNLK VTLELGGKSP I+FDDAD+D A+  A+F +F+N GQCCCAGSR  V E +YD+FV + K RA +  VG+PF+    QGPQ+   QF++++ YI  G ++ AT+  GGDR GN GYF+QPTVF+DV  DM IAQ+EIFGPV +I KFK+  + I+  N T +GLAA V TK+ +TA  +  AL+AGTVWI
Sbjct:  207 AGFPAGVINVISGFGRTAGAAISSHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFDDADIDNAISWANFGIFFNHGQCCCAGSRILVQEGIYDKFVARFKERAQKNKVGNPFEQDTFQGPQVSQLQFDRIMEYINHGKKAGATVATGGDRHGNEGYFIQPTVFTDVTSDMKIAQEEIFGPVVTIQKFKDEAEAIKIGNSTDYGLAAAVHTKNVNTAIRVSNALKAGTVWI 449          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_ENCBU (Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN=ALDH PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.971e-78
Identity = 139/243 (57.20%), Postives = 181/243 (74.49%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG P GV+N+V G G TAGAAL +H D++K++FTG  + G+++ + + K+NLK VTLELGGKSP IIF D+D+D AVE++H A+  N GQ CCAGSRT+VHE +Y+EFV ++  RA +R VGDPF    E GPQ+D  Q +K+L  I SG    A LECGG RLG++GYFV+PTVF+DV   M +A++EIFGPVQ I KFK+ D+VI RAN T +GLAA VFTK+ DTA  +  +L AGTVW+
Sbjct:  209 AGFPAGVINIVPGLGHTAGAALTNHPDINKITFTGSTEVGQLIIQGSGKTNLKRVTLELGGKSPNIIFPDSDLDYAVEVSHQAIMANMGQVCCAGSRTFVHEDIYEEFVRRSVERAKKRTVGDPFDPKNENGPQVDETQLKKILELIESGKTEGAKLECGGKRLGDKGYFVEPTVFTDVTSSMRVAKEEIFGPVQLIFKFKDVDEVIERANDTSYGLAAAVFTKNIDTALKVANSLEAGTVWV 451          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A3_RAT (Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus GN=Aldh1a3 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.880e-78
Identity = 138/242 (57.02%), Postives = 183/242 (75.62%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            G PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGG++P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++   A +R VGDPF +  EQGPQID +QF+K+L  I SG +  A LECGG  + +RG F++PTVFSDV D+M IA++EIFGPVQ ILKFK  ++VI+RAN T +GL A VFTK+ D A  +  AL +GTVW+
Sbjct:  224 GFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGRNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFVRRSVEFAKKRPVGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRGLFIKPTVFSDVTDNMRIAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWV 465          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 3.880e-78
Identity = 139/243 (57.20%), Postives = 183/243 (75.31%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V G+GPT GAA++SH  ++K++FTG  + GK+V+E A++SNLK VTLELGGK+P I+  DAD+D AVE AH  +F+NQGQCC A SR +V E+VY EFV ++   A +R VGDPF    EQGPQID +QF+K+L  I SG +  A LECGG  + ++G F++PTVFS+V D+M IA++EIFGPVQ ILKFK  ++VI+RAN T +GL A VFTK+ D A  +  AL +GTVWI
Sbjct:  223 AGFPPGVVNIVPGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLELGGKNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYSEFVRRSVEYAKKRPVGDPFDVKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDKGLFIKPTVFSEVTDNMRIAKEEIFGPVQPILKFKSIEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWI 465          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77
Identity = 132/243 (54.32%), Postives = 179/243 (73.66%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV+NV+SG+G  AG+A++ HMD+DK++FTG    G+ + + AAKSNLK VTLELGGKSP I+F+DAD+D A+  A+F +FYN GQCCCAGSR  V E +YD+F+ + K RA++  VGDPF     QGPQ+   QF++++ YI+ G ++ AT+  GG+R G  GYF+QPTVF+DV  DM I Q+EIFGPV ++ KFK+ +D I+  N T +GLAAG+ TK   TA  +  ALRAGTVW+
Sbjct:  208 AGIPAGVVNVISGFGRVAGSAISHHMDIDKVAFTGSTLVGRTILQAAAKSNLKKVTLELGGKSPNIVFNDADIDNAISWANFGIFYNHGQCCCAGSRILVQEGIYDKFIARLKERALQNKVGDPFAKDTFQGPQVSQLQFDRIMEYIQHGKDAGATVAVGGERHGTEGYFIQPTVFTDVTSDMKINQEEIFGPVVTVQKFKDVEDAIKIGNSTSYGLAAGIHTKDVTTAIRVSNALRAGTVWV 450          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL2C4_ARATH (Aldehyde dehydrogenase family 2 member C4 OS=Arabidopsis thaliana GN=ALDH2C4 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.284e-77
Identity = 134/243 (55.14%), Postives = 180/243 (74.07%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GVLN+V+G+G TAGAA+ASHMDVDK+SFTG  D G+ + + AA SNLK V+LELGGKSP +IF+DAD+D+A +LA    FYN+G+ C A SR +V E +YD+ VEK   +A    VGDPF S   QGPQ+D  QFEK+L YI  G    ATL  GG  +G++GYF+QPT+F+DV +DM I QDEIFGPV S++KFK  ++ I+ AN T++GLAAG+ ++  D  NT+ R+++AG +W+
Sbjct:  211 AGIPDGVLNIVTGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLELGGKSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFDSTARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWV 453          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH1_ELEED1.165e-8260.08Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulu... [more]
ALDH1_MACPR1.522e-8259.67Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelid... [more]
ALDH_CLAHE7.071e-8055.56Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
AL1A3_MOUSE1.333e-7857.85Aldehyde dehydrogenase family 1 member A3 OS=Mus m... [more]
ALDH_EMENI2.275e-7856.79Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALDH_ENCBU2.971e-7857.20Aldehyde dehydrogenase OS=Enchytraeus buchholzi GN... [more]
AL1A3_RAT3.880e-7857.02Aldehyde dehydrogenase family 1 member A3 OS=Rattu... [more]
AL1A3_HUMAN3.880e-7857.20Aldehyde dehydrogenase family 1 member A3 OS=Homo ... [more]
ALDH_ASPNG3.284e-7754.32Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
AL2C4_ARATH3.284e-7755.14Aldehyde dehydrogenase family 2 member C4 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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