CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH2_MACPR (Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 6.425e-65
Identity = 118/193 (61.14%), Postives = 148/193 (76.68%), Query Frame = 2
Query:  152 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            NLK VTLELGGKSP I+F DAD+D AVE AH  LF++QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV QGPQID EQ++K++  I SG +  A LECGG   GN+GYF+QPTVFS+V D+M IA++EIFGPVQ I+KFK  D+VI+RAN T +GLAAGVFTK  D A T+  AL+AGTVW+
Sbjct:    1 NLKRVTLELGGKSPCIVFADADLDNAVEFAHRGLFFHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKIIDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTFYGLAAGVFTKDLDKAVTVSAALQAGTVWV 193          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.139e-60
Identity = 114/243 (46.91%), Postives = 163/243 (67.08%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV+N++ G G   G  L++H DV K++FTG   TG+ + ++AA + +K VTLELGGKSP I+F DAD+D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K K       VGDPF   V QG Q   +Q  K+L Y+       A L  GG R G++GYFV+PTVF+DVK+DM I ++E+FGP+ ++ KF   D+VI  AN +++GLAAG+ T   + A  + + ++AGTVWI
Sbjct:  232 AGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAADT-VKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKEDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWI 473          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 231.106 bits (588), Expect = 4.765e-60
Identity = 114/243 (46.91%), Postives = 162/243 (66.67%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV+N++ G G   G  L++H DV K++FTG   TG+ + ++AA + +K VTLELGGKSP I+F DAD+D+AV+   F +FYN G+ CCAGSR Y+ + VY+E ++K K       VGDPF   V QG Q   +Q  K+L Y+       A L  GG R G++GYFV+PTVF+DVK DM I ++E+FGP+ ++ KF   D+VI  AN +++GLAAG+ T   + A  + + ++AGTVWI
Sbjct:  232 AGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAADT-VKKVTLELGGKSPNIVFADADLDKAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKLKDYTESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHGSKGYFVKPTVFADVKGDMRIVKEEVFGPIVTVSKFSTVDEVIAMANDSQYGLAAGIHTNDINKAVDVSKRVKAGTVWI 473          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.460e-58
Identity = 116/247 (46.96%), Postives = 159/247 (64.37%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV G+G   GAAL +H    K+S TG   TGK +   A + +LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + FVE+   R  +  +GDP     + GP ++  Q +KVL YI  G    ATL CGG     +  ++GYF++PT+F+DV DDM IA++EIFGPV S+L+F + D+VI RAN T FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGFGDV-GAALVNHRLTAKVSLTGSVPTGKRIMAQAGE-HLKHVTMELGGKSPIIVFDDADIESAIGGAMLGNFYSTGQVCSNGTRVFVHKNLRERFVERLVERTRKIRIGDPLDEATQMGPLVNRAQRDKVLSYIEKGKAEGATLACGGGVPKLQGFDKGYFIEPTIFTDVTDDMTIAREEIFGPVMSVLEFSDEDEVIARANDTEFGLAAGVFTADIARGHRVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURM1 (Betaine aldehyde dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=betB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.825e-58
Identity = 120/247 (48.58%), Postives = 154/247 (62.35%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL       G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTEGHFANGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.825e-58
Identity = 120/247 (48.58%), Postives = 155/247 (62.75%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.825e-58
Identity = 120/247 (48.58%), Postives = 155/247 (62.75%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.825e-58
Identity = 120/247 (48.58%), Postives = 155/247 (62.75%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F +K   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL+F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQKVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILEFESEDEVIARANDTHYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: YLX7_SCHPO (Putative aldehyde dehydrogenase-like protein C922.07c OS=Schizosaccharomyces pombe GN=SPAC922.07c PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.935e-58
Identity = 115/245 (46.94%), Postives = 159/245 (64.90%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMR-RIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG-NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG P GV+N++SG G  AG+ +A H  +DK++FTG    G IVQ+LAA SNLK VTLE GGKSPF++F+DAD+DQAV+ A   + YN GQ C + SR YV + VYD+F+E  K   ++  IVG PF      GP ++  Q+ ++  YI  G +  A L  G + L   +GYF+ PT+F+D  ++M I ++EIFGPV +I KFK  D+ I +AN T +GLAA  FTK  + A+ +   L AG V+I
Sbjct:  207 AGFPKGVVNIISGLGTVAGSYMAKHPGIDKIAFTGSTKVGVIVQQLAA-SNLKAVTLECGGKSPFLVFEDADLDQAVKWAALGIMYNSGQICTSNSRIYVQDSVYDKFIELFKKHVIQDYIVGMPFDDNTVVGPVVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFGPVVAISKFKTEDEAIEKANNTTYGLAAMCFTKDLERAHRVSDELEAGMVFI 450          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_VIBVU (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus GN=betB PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.298e-57
Identity = 125/247 (50.61%), Postives = 156/247 (63.16%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G     G  L +H ++DK+SFTG   TGK V   +A + LKPVT+ELGGKSP IIFDDAD+D AV  A  A FY QG+ C  G+R YV   +YD FVE+ K R  + IVGDP     + G  I     EKVL  I S  ES ATL  GG ++  RG     FV PTVF D +D+M   Q+EIFGPV S+L F + D+VI RAN T++GLAAGVFT++   A+ ++  L+AG  WI
Sbjct:  192 AGVPDGVFNVVQG-DYRVGQMLTAHPEIDKVSFTGESGTGKKVMADSA-ATLKPVTMELGGKSPLIIFDDADLDDAVSAAMVANFYTQGEVCTHGTRVYVQRAMYDAFVEQLKERTEKLIVGDPMNMETQIGSLISKSHLEKVLGAISSAKESGATLLTGGFQVTERGLEKGCFVAPTVFVDCRDEMPHVQNEIFGPVMSVLVFDDEDEVIARANNTQYGLAAGVFTQNLSKAHRVIHQLQAGICWI 436          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ALDH2_MACPR6.425e-6561.14Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=... [more]
ALDH5_YEAS72.139e-6046.91Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAST4.765e-6046.91Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
BETB_OCHA44.460e-5846.96Betaine aldehyde dehydrogenase OS=Ochrobactrum ant... [more]
BETB_BURM15.825e-5848.58Betaine aldehyde dehydrogenase OS=Burkholderia mul... [more]
BETB_BURCH5.825e-5848.58Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCC5.825e-5848.58Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA5.825e-5848.58Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
YLX7_SCHPO9.935e-5846.94Putative aldehyde dehydrogenase-like protein C922.... [more]
BETB_VIBVU1.298e-5750.61Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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