CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9488 contig Ccv1_Contig9488:153..887. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BRUA1 (Betaine aldehyde dehydrogenase OS=Brucella abortus (strain S19) GN=betB PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.695e-57
Identity = 115/247 (46.56%), Postives = 158/247 (63.97%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGD----RLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NVV GYG   GAAL +H    K+S TG   TG+ +   A +  LK VT+ELGGKSP I+FDDAD++ A+  A    FY+ GQ C  G+R +VH+ + + F+E+   R  +  +GDPF    + GP I   Q +KVL YI+ G    ATL CGG     +  ++G+F++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WI
Sbjct:  194 AGLPDGLFNVVQGYGDV-GAALVNHRLTAKVSLTGSVPTGRRIMAQAGEQ-LKHVTMELGGKSPLIVFDDADLESAIGGAMLGNFYSTGQVCSNGTRVFVHKNIRERFIERLVERTRKIRIGDPFDEATQMGPLISAAQRDKVLSYIKKGKAEGATLACGGGVPKLQGFDKGFFIEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURS3 (Betaine aldehyde dehydrogenase OS=Burkholderia sp. (strain 383) GN=betB PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.213e-57
Identity = 119/247 (48.18%), Postives = 154/247 (62.35%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L  H D+ K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +VH  + D F ++   R  R  VG P  +    GP +   Q +KVL +I SG    A L  GG RL +     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+VI RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLTGHPDIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSSGQVCTNGTRVFVHRSIKDAFTQRVLERVKRIRVGKPTDADTNFGPLVSAAQLDKVLGFIESGKAEGAKLLAGGTRLTDGHFGSGQYVAPTVFGDCRDDMKIVREEIFGPVMSILDFESEDEVIARANDTHYGLAAGVVTENLSRAHRTIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.891e-57
Identity = 123/247 (49.80%), Postives = 155/247 (62.75%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R  VG P  S    GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.891e-57
Identity = 123/247 (49.80%), Postives = 155/247 (62.75%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R  VG P  S    GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRVGKPSDSDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.891e-57
Identity = 108/244 (44.26%), Postives = 153/244 (62.70%), Query Frame = 2
Query:    5 GLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN--RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            GLPPGVLN+V+G GP AGA LA+H DVDK++FTG   TG  V   AA+  +KPVTLELGGKSP I+F+D D+DQ VE   F  F+  GQ C A SR  VHE +  EF+++         + DPF+ G   GP I   Q++K++++I +     AT+ CGG R  +  +GYF++PT+ SD+   M I ++E+FGPV  +  F   D+ +  AN T +GLA+ VF+K  +    + + L +G VW+
Sbjct:  205 GLPPGVLNIVTGLGPDAGAPLAAHPDVDKVAFTGSSATGSKVMASAAQL-VKPVTLELGGKSPIIVFEDVDIDQVVEWTMFGCFWTNGQICSATSRLLVHESIAAEFIDRLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILCGGSRPEHLKKGYFIEPTIISDISTSMQIWREEVFGPVLCVKTFSSEDEALELANDTEYGLASAVFSKDLERCERVSKLLESGAVWV 447          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH2_YEAST (Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyces cerevisiae GN=ALD2 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 2.891e-57
Identity = 117/254 (46.06%), Postives = 154/254 (60.63%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR--IVG--DPFKSGVEQGPQIDPEQFEKVLRYIRSG-------IESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+N+V GYG   G ALASHMD+DK+SFTG    G  V E + +SNLK VTLE GGKSP ++F+DAD+D+A++     +FYN GQ C A SR YV   +YD+FVEK K  A +   + G  DPF      GP I   Q++++  YI  G       +   +    G    G +GYF+ PT+F+DV     + QDEIFGPV  + KF   DD ++ AN T +GLA+ VFTK    A+   R ++AGTVWI
Sbjct:  211 AGFPPGVVNIVPGYGSLVGQALASHMDIDKISFTGSTKVGGFVLEASGQSNLKDVTLECGGKSPALVFEDADLDKAIDWIAAGIFYNSGQNCTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKREEKLDMFQTSEFPIG----GAKGYFIPPTIFTDVPQTSKLLQDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVKKAHMFARDIKAGTVWI 460          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.775e-57
Identity = 120/247 (48.58%), Postives = 157/247 (63.56%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G     G  L +H D+ K+SFTG   TGK V   +AK+ LK VT+ELGGKSP IIFDDA +D AV  +  A FY QG+ C  G+R YVHE +Y++F+++ K R  + I+G+P     + G  I  E   KVL  I    +S ATL  GG ++ + G     FV PTVF+D  DDM   Q EIFGPV S+LKF + DDVIRRAN T++GLAAGVFT++   A+ ++  ++AG  W+
Sbjct:  192 AGLPDGVFNVVQG-DYRVGQMLTAHPDIAKVSFTGETGTGKAVMSDSAKT-LKSVTMELGGKSPMIIFDDAKLDDAVSASMVANFYTQGEVCTNGTRVYVHESIYNDFIDQLKTRTEKLIIGNPMDMETQIGALISKEHLSKVLEAIELAKQSGATLLTGGYQVTDNGLANGNFVIPTVFTDCHDDMPHVQQEIFGPVMSVLKFTDEDDVIRRANDTQYGLAAGVFTQNLSRAHRVIHQMQAGICWV 436          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.775e-57
Identity = 118/246 (47.97%), Postives = 155/246 (63.01%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA  NLK VT+ELGGKSP I+FDDAD+D AV  A    FY+ GQ C  G+R +V + +  EF+++ KAR    ++GDP     + GP +   Q EKV+ YI  G    ATL  GG   + +   GY++QPTVF+DV DDM IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WI
Sbjct:  195 AGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRRVAAAAA-GNLKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYIQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVIARANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_RHIEC (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=betB PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.931e-57
Identity = 120/246 (48.78%), Postives = 155/246 (63.01%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA S LK VT+ELGGKSP I+FDDAD+D AV  A    FY+ GQ C  G+R +V + V  EF+++ KAR    ++GDP     + GP +   Q EKV+ YI  G    ATL  GG   + +   GY+VQPTVF+DV DDM IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WI
Sbjct:  195 AGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGS-LKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKAVKAEFLKRLKARTEAMLIGDPLDEATQIGPMVSWAQREKVIAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_PSE14 (Betaine aldehyde dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=betB PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.931e-57
Identity = 116/247 (46.96%), Postives = 154/247 (62.35%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLG----NRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NV++G G   G  +  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A FY+ GQ C  G+R +V   +  EF  K   R  R   G+P    +  GP +  E  E VL YI  G E  A L CGGDRL     ++G FV PTVF+D  D+M I ++EIFGPV SIL +   ++V+RRAN T FGLAAG+ T+  + A+ ++  L AG  WI
Sbjct:  195 AGVPNGVFNVLTGSGREVGTWITEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFDDADLDRAADIAMMANFYSSGQVCTNGTRVFVPNALKAEFEAKILERVKRIRAGNPEDENINFGPLVSFEHMESVLGYIAKGKEQGARLLCGGDRLTGGVFDKGAFVAPTVFTDCTDEMTIVREEIFGPVMSILGYDTEEEVVRRANDTDFGLAAGIVTRDLNRAHRVIHLLEAGICWI 441          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BRUA11.695e-5746.56Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]
BETB_BURS32.213e-5748.18Betaine aldehyde dehydrogenase OS=Burkholderia sp.... [more]
BETB_BURP12.891e-5749.80Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP02.891e-5749.80Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BADH_BETVU2.891e-5744.26Betaine aldehyde dehydrogenase, chloroplastic OS=B... [more]
ALDH2_YEAST2.891e-5746.06Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyce... [more]
BETB_VIBSL3.775e-5748.58Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]
BETB_RHILW3.775e-5747.97Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
BETB_RHIEC4.931e-5748.78Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]
BETB_PSE144.931e-5746.96Betaine aldehyde dehydrogenase OS=Pseudomonas syri... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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