CX295024

Overview
NameCX295024
Unique NameCX295024
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_RHIE6 (Betaine aldehyde dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 118/246 (47.97%), Postives = 155/246 (63.01%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGG---DRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP G+ NV+ G   T G  L +H DV K+S TG   TG+ V   AA S LK VT+ELGGKSP I+FDDAD+D AV  A    FY+ GQ C  G+R +V + +  EF+++ KAR    ++GDP     + GP +   Q EKV+ YI  G    ATL  GG   + +   GY+VQPTVF+DV D+M IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WI
Sbjct:  195 AGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRRVAAAAAGS-LKHVTMELGGKSPLIVFDDADLDSAVGGAMLGNFYSTGQVCSNGTRVFVQKGIKTEFLKRLKARTEAMLIGDPMDEATQIGPMVSWAQREKVVAYIEKGKAEGATLVAGGGIPNNVSGEGYYVQPTVFADVTDEMTIAREEIFGPVMSVLDFDDEDEVITRANASEFGLSGGVFTADLTRAHRVVDRLEAGTLWI 438          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 117/247 (47.37%), Postives = 152/247 (61.54%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NV++G G   G  L  H  ++K+SFTG  DTGK V   A+ S+LK VT+ELGGKSP IIFDDAD+D+A + A  A FY+ GQ C  G+R +V   +   F  K   R  R  +G+P       GP +     E VL YI  G E  A + CGG+RL +    +G FV PTVF+D  DDM I ++EIFGPV +IL ++  ++VIRRAN T FGLAAG+ TK  + A+ ++  L AG  WI
Sbjct:  195 AGLPDGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTDTGKKVMASASSSSLKDVTMELGGKSPLIIFDDADLDRAADTAMMANFYSSGQVCTNGTRVFVPSHLKAAFEAKIAERVARIRIGNPEDENTNFGPLVSFPHMESVLGYIAKGKEEGARVLCGGERLTDGEFAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWI 441          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURP6 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=betB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 121/247 (48.99%), Postives = 153/247 (61.94%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R   G P       GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRAGKPSDPDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURMS (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=betB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 121/247 (48.99%), Postives = 153/247 (61.94%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R   G P       GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRAGKPSDPDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURMA (Betaine aldehyde dehydrogenase OS=Burkholderia mallei GN=betB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 121/247 (48.99%), Postives = 153/247 (61.94%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R   G P       GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRAGKPSDPDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURM9 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=betB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 121/247 (48.99%), Postives = 153/247 (61.94%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R   G P       GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRAGKPSDPDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_BURM7 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=betB PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 121/247 (48.99%), Postives = 153/247 (61.94%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGN----RGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG+P GV NVV G G + GA L++H  + K+SFTG  +TGK V  LA  S+LK VT+ELGGKSP I+FDDAD+D+A ++A  A F++ GQ C  G+R +V + V D FVE+  AR  R   G P       GP     Q +KVL YI SG    A L  GG RL N     G +V PTVF D +DDM I ++EIFGPV SIL F+  D+ I RAN T +GLAAGV T++   A+  +  L AG  WI
Sbjct:  195 AGVPAGVFNVVQGDG-SVGALLSAHPGIAKVSFTGGVETGKKVMSLAGASSLKEVTMELGGKSPLIVFDDADLDRAADIAVTANFFSAGQVCTNGTRVFVQQAVKDAFVERVLARVARIRAGKPSDPDTNFGPLASAAQLDKVLGYIDSGKAEGAKLLAGGARLVNDHFASGQYVAPTVFGDCRDDMRIVREEIFGPVMSILSFETEDEAIARANATDYGLAAGVVTENLSRAHRAIHRLEAGICWI 440          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: ALDH3_YEAST (Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyces cerevisiae GN=ALD3 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 112/250 (44.80%), Postives = 152/250 (60.80%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRR--IVG--DPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRL---GNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG PPGV+NV+ GYG   G AL +HMD+DK+SFTG    G  V E + +SNLK +TLE GGKSP ++F+DAD+D+A+E     +F+N GQ C A SR YV   +YD+FVEK K  A +   + G  DPF      GP I   Q++++  YI  G +               G +GYF+ PT+F+DV +   + +DEIFGPV  + KF   DD ++ AN T +GLA+ VFTK    A+   R ++AGTVWI
Sbjct:  211 AGFPPGVVNVIPGYGSVVGKALGTHMDIDKISFTGSTKVGGSVLEASGQSNLKDITLECGGKSPALVFEDADLDKAIEWVANGIFFNSGQICTANSRVYVQSSIYDKFVEKFKETAKKEWDVAGKFDPFDEKCIVGPVISSTQYDRIKSYIERGKKEEKLDMFQTSEFPIGGAKGYFIPPTIFTDVPETSKLLRDEIFGPVVVVSKFTNYDDALKLANDTCYGLASAVFTKDVKKAHMFARDIKAGTVWI 460          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.196e-56
Identity = 108/245 (44.08%), Postives = 158/245 (64.49%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGYFVQPTVFSDVKDDMLIAQDEIFGPVQSILKFK--ETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AG P GV+N++ G G  AG  L+ H D+ KL FTG    GK + +  A SNLK V+LELGGKSP IIF+D ++D+AV +   A+F+N+G+ C A  R +V E ++DEFV +      +  +GDP     + GPQ      EK+L+Y  +G++  ATL  GG ++   G+F++PTVF+DV+D M +A++E FGP+  I KF+  + D V++RAN T +GLA+GVFT+  + A  +   L AGTV+I
Sbjct:  637 AGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDYMYLAKEESFGPIMVISKFQNGDIDGVLQRANSTEYGLASGVFTRDINKAMYVSEKLEAGTVFI 881          
BLAST of CX295024 vs. ExPASy Swiss-Prot
Match: BETB_VIBPA (Betaine aldehyde dehydrogenase OS=Vibrio parahaemolyticus GN=betB PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.120e-56
Identity = 120/247 (48.58%), Postives = 152/247 (61.54%), Query Frame = 2
Query:    2 AGLPPGVLNVVSGYGPTAGAALASHMDVDKLSFTGHCDTGKIVQELAAKSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKSGVEQGPQIDPEQFEKVLRYIRSGIESNATLECGGDRLGNRGY----FVQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWI 730
            AGLP GV NVV G     G  L +H D+ K+SFTG   TGK+V   +AK+ LK VT+ELGGKSP I+FDDA +D AV  A  A FY QG+ C  G+R +VHE +YD+FV + K R  + +VGDP     + G  I  E   KVL  I S   S ATL  GG ++ + G     FV PTVF D  D M   Q EIFGPV S+LKF E  +VI RAN T +GLAAGVFT++   A+ ++  ++AG  W+
Sbjct:  192 AGLPDGVFNVVQG-DYRVGQMLTAHPDIAKVSFTGESGTGKVVMGDSAKT-LKQVTMELGGKSPLIVFDDAKLDDAVSAAMVANFYTQGEVCTNGTRVFVHESIYDDFVAQLKTRTEKLVVGDPLDENTQIGALISKEHESKVLSAIESAKASGATLLTGGYKVTDNGLQNGNFVAPTVFIDCDDSMSHVQQEIFGPVMSVLKFSEEAEVIERANDTDYGLAAGVFTQNLSRAHRVIHKIQAGICWV 436          
The following BLAST results are available for this feature:
BLAST of CX295024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_RHIE63.196e-5647.97Betaine aldehyde dehydrogenase OS=Rhizobium etli (... [more]
BETB_PSEF53.196e-5647.37Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_BURP63.196e-5648.99Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURMS3.196e-5648.99Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURMA3.196e-5648.99Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM93.196e-5648.99Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
BETB_BURM73.196e-5648.99Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
ALDH3_YEAST3.196e-5644.80Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyce... [more]
AL1L2_HUMAN3.196e-5644.08Probable 10-formyltetrahydrofolate dehydrogenase A... [more]
BETB_VIBPA7.120e-5648.58Betaine aldehyde dehydrogenase OS=Vibrio parahaemo... [more]

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Properties
Property NameValue
Genbank descriptionC05065G06SK DroRLeaf1 Citrus clementina cDNA clone C05065G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295024 ID=CX295024; Name=CX295024; organism=Citrus clementina; type=EST; length=735bp
GGCTGGTCTTCCCCCCGGTGTTTTGAATGTAGTCTCTGGTTATGGTCCAA
CAGCTGGTGCAGCTCTTGCCAGCCATATGGATGTGGACAAGCTGTCTTTT
ACAGGACACTGTGATACTGGTAAGATTGTTCAGGAACTGGCTGCAAAAAG
CAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAAATCACCATTTATAA
TATTCGATGATGCTGATGTTGACCAGGCTGTGGAACTTGCACACTTTGCT
TTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGATCTCGTACTTATGT
ACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGCAAAGGCACGTGCAA
TGAGGCGTATTGTTGGCGATCCCTTCAAGAGTGGTGTTGAACAAGGTCCT
CAGATTGATCCAGAGCAATTTGAGAAGGTCCTTAGGTACATAAGGTCTGG
AATTGAAAGCAATGCAACCCTTGAGTGTGGAGGTGATAGATTGGGCAACA
GAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATG
TTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTT
CAAGGAAACTGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTC
TAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATG
CGTGCACTGAGAGCTGGGACTGTATGGATTACTGC
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