CX295025

Overview
NameCX295025
Unique NameCX295025
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.453e-14
Identity = 67/191 (35.08%), Postives = 85/191 (44.50%), Query Frame = 1
Query:   97 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIA-IGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +A  AEF++T ++VF G GS + +          PS                       SG H NPAVT    VG +ISL R + Y  AQL G+T    LL  VT G   +T     + +      AV  E+V+T  LV  V+A+      G     +P A IG  V    L G  F G SMNPA SFGPA
Sbjct:   22 KALFAEFLATGLYVFFGVGSVLPWP------VALPSVLQIAITFNLATATAVQISWKT-SGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFAS----MDGRQTLASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPA 201          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.897e-14
Identity = 65/205 (31.71%), Postives = 96/205 (46.83%), Query Frame = 1
Query:   67 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK-FVTNGQTT---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            P E +     RA +AEFI+T +F++    + M   +  +  A+                         ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K F  N   T    A  ++ G    + +  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA S G A
Sbjct:   42 PGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA 243          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.897e-14
Identity = 55/196 (28.06%), Postives = 93/196 (47.45%), Query Frame = 1
Query:   85 PDALRAALAEFISTLIFVFAGEG----SGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGA-WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            P  L+  ++E ++T + VF   G    SG   ++++  G +                        +ISG H+NPAVT    V  +   ++   YW AQ  G+  A  +LK V +         ++ VG  W+++V E+++TF +++   A A D +  ++G +A +A+G  V    +  GA  G SMNPA + GPA
Sbjct:   45 PHLLKKVVSEVVATFLLVFMTCGAAGISGSDLSRISQLGQSIAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVIH--PVDVIGTTTPVGPHWHSLVVEVIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPA 227          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.236e-14
Identity = 59/188 (31.38%), Postives = 87/188 (46.28%), Query Frame = 1
Query:   94 LRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            L+  +AE I T   +FAG GS +A NK+ +     P                       ISG H NPAVT    + G     +  LY IAQL+GS +A   L  + +    + F          ++  EI+++F L++ +   A D +  ++G +A IA+G  +  N+   G   GASMNPA S GPA
Sbjct:   42 LQKLIAEAIGTYFVIFAGCGS-VAVNKI-YGSVTFPGICVTWGLIVMVMVYTVGY----ISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTVPVGSNGQSLAIEIIISFLLMFVISGVATDDR--AIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPA 221          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.227e-14
Identity = 56/184 (30.43%), Postives = 81/184 (44.02%), Query Frame = 1
Query:  106 LAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +AE + T   +FAG  + +A NK T      P                      +ISG H+NPAVT      G     R   Y  AQ+ GS  A   L+ +  G     F  +       ++  E ++TF L++ V   A D +  ++G +A +A+G  V  N+L  G   GASMNPA + GPA
Sbjct:   57 IAEILGTFFLIFAG-CAAVAVNKRTGGTVTFPGICITWGLAVMVMVYSVG----HISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAGSDVQSLAMEFIITFYLMFVVSGVATDNR--AIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPA 233          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.520e-14
Identity = 65/206 (31.55%), Postives = 93/206 (45.15%), Query Frame = 1
Query:   67 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-----TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            P E T     RA +AEFI+T +F++    + M    +  +                            ISGGH+NPAVTFG F+   +SL R I Y + Q+LG+     ++K     Q        A  ++ G    + +  EIV TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA S G A
Sbjct:   45 PSELTSWSFYRAGIAEFIATFLFLYITVLTVMGV--VRESSKCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA 247          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.210e-14
Identity = 65/201 (32.34%), Postives = 94/201 (46.77%), Query Frame = 1
Query:   97 RAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK--------FVTNGQTTSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            RA +AEFI+T +F++    + M   +  +  A+                         ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K         +  G  T A  +   SG+GA      EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA S G A
Sbjct:   52 RAGIAEFIATFLFLYITVLTVMGVKRSPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA 243          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.210e-14
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 1
Query:   67 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK--------FVTNGQTTSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            P E +     RA +AEFI+T +F++    + M   +  +  A+                         ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K         +  G  T A  +   SG+GA      EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA S G A
Sbjct:   42 PGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA 243          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.210e-14
Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 1
Query:   67 PREATHPDALRAALAEFISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK--------FVTNGQTTSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            P E +     RA +AEFI+T +F++    + M   +  +  A+                         ISGGH+NPAVTFG F+   +SL R + Y + Q LG+     ++K         +  G  T A  +   SG+GA      EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA     G  +NPA S G A
Sbjct:   42 PGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA 243          
BLAST of CX295025 vs. ExPASy Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.606e-13
Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 1
Query:  268 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPA 657
            +ISG H NPAVT    V       +  LY  AQL GS +A L L+ + N    + F  +    +  A+V EI+++F L++ +   A D +  + G +A IA+G  +  N+   G   GASMNPA S GPA
Sbjct:   95 HISGAHFNPAVTVTFAVFRRFPWYQVPLYIGAQLTGSLLASLTLRLMFNVTPKAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSR--ATGELAGIAVGMTIILNVFVAGPISGASMNPARSLGPA 222          
The following BLAST results are available for this feature:
BLAST of CX295025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
AQP6_MOUSE1.453e-1435.08Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
PIP13_ARATH1.897e-1431.71Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
NIP21_ORYSJ1.897e-1428.06Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
NIP1_NICAL3.236e-1431.38Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
NIP13_ORYSJ4.227e-1430.43Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica G... [more]
PIP2_PEA5.520e-1431.55Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP12_ARATH7.210e-1432.34Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA7.210e-1431.75Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH7.210e-1431.75Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
NIP42_ARATH1.606e-1336.92Probable aquaporin NIP4-2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC05065G07SK DroRLeaf1 Citrus clementina cDNA clone C05065G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295025 ID=CX295025; Name=CX295025; organism=Citrus clementina; type=EST; length=657bp
CCCCAAAGGTTCAATCTTCATCGTTTGATCTCCATCATGCCGATCAGAAA
CATTGCCGTTGGCCATCCCCGTGAGGCGACTCATCCAGATGCCCTAAGGG
CAGCCCTAGCAGAGTTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAA
GGCTCGGGCATGGCCTTCAACAAGCTCACTCACAACGGCGCCAACACCCC
CTCCGGCCTCGTCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTG
CTGTCGCCGTTGGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTC
ACCTTTGGCGCCTTCGTTGGAGGTAACATCTCCCTTCTACGAGGCATCCT
CTACTGGATCGCCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTA
AGTTCGTTACCAACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGA
GTTGGTGCATGGAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACT
AGTGTACACAGTGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGG
GGACAATTGCACCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTG
GCGGGCGGGGCGTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGG
GCCAGCT
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