CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRP1 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M1 GN=atpA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOTH (V-type ATP synthase alpha chain OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.389e-36
Identity = 86/202 (42.57%), Postives = 123/202 (60.89%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYR---LVSQKFEDPQKR-----TALVAK 587
            +GAVSPPGGD S+PVT ATL I++VFWGLD  LA R+HFP++NWL SYS Y   +  +  E    D+  +R+    +LQ E +L EIV+LVG DAL+  D++TLE AK +REDYL QNAF   D +    K   M++ I+ FY    +A+E  AG+  +++    ++ ++G   Y     V+  F + +K       AL+AK
Sbjct:  387 IGAVSPPGGDLSEPVTQATLRIIKVFWGLDSSLAYRRHFPAINWLQSYSLYLDIIGKWISENISRDWETLRSDTMRILQEEAELEEIVRLVGVDALSPSDRLTLEAAKSIREDYLHQNAFHEVDTYTSLNKQYRMLKLILGFYYSGKKALE--AGVSIKELFELPVREKIGRAKYTPEDQVNSHFNEIEKELNEQIEALIAK 586          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_NATPD (V-type ATP synthase alpha chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 78/158 (49.37%), Postives = 106/158 (67.09%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFPS+NW  SYS Y   L+ ++ E    +F  +R  A +VL  ED+L EIVQLVGKDAL E  ++TLE A+ +RE +L QNAF   D +C   K+  M+  I HF + A +A++ G  ++
Sbjct:  389 VIGAVSPPGGDFSEPVTQNTLRIVKCFWALDADLAERRHFPSINWNESYSLYKEQLDPWWRENVHEEFPEVRQWAVDVLDEEDELQEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNAFHDVDTYCEPEKTYQMLTAIQHFNDEAFEALDAGVPVE 546          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ARCFU (V-type ATP synthase alpha chain OS=Archaeoglobus fulgidus GN=atpA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.813e-36
Identity = 80/158 (50.63%), Postives = 103/158 (65.19%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            +VGAVSPPGGDFS+PVT  TL IV+VFW LD KLA R+HFP++NWL SYS Y   L+  F E    ++  +R  A EVLQ E +L EIVQLVG DAL E  ++ LE A+++RE YL Q A+ P D +C   K   M++ I    +   QA+E G  +D
Sbjct:  386 VVGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLAARRHFPAINWLQSYSLYVDTLKDWFAENVSEEWNELRRWAMEVLQEEANLQEIVQLVGSDALPESQRVLLEVARIIREVYLIQYAYHPVDTYCSVQKQYDMLKAIKQINDWFYQALEAGKTID 543          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEVO (V-type ATP synthase alpha chain OS=Thermoplasma volcanium GN=atpA PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.368e-36
Identity = 71/158 (44.94%), Postives = 106/158 (67.09%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGD S+PV+  TL + +VFW LD  LA R+HFPS+NWL SYS Y+  L  +Y E    D+ ++R++A ++LQRE +L E+ QLVG DA+ E +K  L+ A+++RED+L Q+AF   D +C   K   M++ I+   +  + A++ G  MD
Sbjct:  569 VIGAVSPPGGDISEPVSQNTLRVTRVFWALDASLANRRHFPSINWLNSYSLYTEDLRHWYDENVAKDWGSLRSQAMDILQRESELQEVAQLVGYDAMPEKEKSILDVARIIREDFLQQSAFDEIDSYCSLRKQYLMLKAIMELNSYQSMAIDHGVTMD 726          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEP3 (V-type ATP synthase alpha chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=atpA PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.368e-36
Identity = 76/154 (49.35%), Postives = 105/154 (68.18%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +VGAVSPPGGD S+PVT ATL +V+VFW LD +LA  +HFP++NWL SYS YS  +E +  +    D+  +R++A  +LQ E  L EIV+LVG DAL+  D++ LE A+ +RED+L QNAF   D +    K   M++ I+ FY  A +A+EKG
Sbjct:  386 VVGAVSPPGGDLSEPVTQATLRVVKVFWALDSELAYARHFPAINWLTSYSLYSDVVEDYMNKNVSSDWGELRSEAMRLLQEEASLQEIVRLVGIDALSTRDRLVLEVARSIREDFLHQNAFHEVDTYSSMEKQYRMLKLIMIFYQEAQKALEKG 539          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA3_METHJ (V-type ATP synthase alpha chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA3 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.368e-36
Identity = 74/154 (48.05%), Postives = 107/154 (69.48%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGDFS+PVT  TL IV+VFW LD  LA ++HFP++NWL+SYS YS     ++E+   P+FI ++ +  E+LQRE++L EI++LVG + L E D++ L  A++LRE YL Q AF  +D F    K   M++ I  F++ A +A+E G
Sbjct:  388 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDADLAYQRHFPAINWLMSYSLYSPIAGIWWEEHIGPEFIRMKQEMMEILQRENELEEIIRLVGPETLPESDRLLLLKAEILRESYLMQYAFDEFDTFTGPKKQYRMLKAIFTFFSQAERALETG 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPZ (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=atpA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.040e-36
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++ +  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLIMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_AERPE (V-type ATP synthase alpha chain OS=Aeropyrum pernix GN=atpA PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.040e-36
Identity = 79/186 (42.47%), Postives = 115/186 (61.83%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDP 560
            +VGAVSPPGGDFS+PVTS T   ++VFW LD KLA  +H+P++NWL+SYS Y     + ++E  D  +   R +A ++L RE +L EIV+LVG + L E DK+ LETA+L+++ +L QNAF P D F    K   +++ I+  +  + + +EKG       +T   I   LG L+  +V  KF  P
Sbjct:  395 VVGAVSPPGGDFSEPVTSHTTRFIRVFWALDTKLAYSRHYPAINWLMSYSAYVDLVTQWWHENVDKRWREYRDEAMDILLRESELQEIVRLVGTEGLDEKDKMVLETARLIKDGFLKQNAFDPIDAFATPQKQFRLLKMIMDIHRKSLELIEKG-------VTTQQILQALGRLYIDIVKAKFTIP 573          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: NTPA_ENTHR (V-type sodium ATPase catalytic subunit A OS=Enterococcus hirae GN=ntpA PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.040e-36
Identity = 76/154 (49.35%), Postives = 105/154 (68.18%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            + AVSP GGD S+PVT  TL +V+VFWGLD  LAQ++HFPS+NW+ SYS YST +  + +Q    D+ ++ T+   +LQ E+ LNEIV+LVG D+L++ D++TLE AK +REDYL QNAF   D F    K   M++ I+ F   A +A+  GA
Sbjct:  387 ISAVSPSGGDISEPVTQNTLRVVKVFWGLDSSLAQKRHFPSINWIQSYSLYSTEVGRYMDQILQQDWSDMVTEGMRILQEEEQLNEIVRLVGIDSLSDNDRLTLEVAKSIREDYLQQNAFDDVDTFTSREKQFNMLKVILTFGKEARKALSLGA 540          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_STRP18.140e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_CLOTH1.389e-3642.57V-type ATP synthase alpha chain OS=Clostridium the... [more]
VATA_NATPD1.813e-3649.37V-type ATP synthase alpha chain OS=Natronomonas ph... [more]
VATA_ARCFU1.813e-3650.63V-type ATP synthase alpha chain OS=Archaeoglobus f... [more]
VATA_THEVO2.368e-3644.94V-type ATP synthase alpha chain OS=Thermoplasma vo... [more]
VATA_THEP32.368e-3649.35V-type ATP synthase alpha chain OS=Thermoanaerobac... [more]
VATA3_METHJ2.368e-3648.05V-type ATP synthase alpha chain 3 OS=Methanospiril... [more]
VATA_STRPZ4.040e-3650.65V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_AERPE4.040e-3642.47V-type ATP synthase alpha chain OS=Aeropyrum perni... [more]
NTPA_ENTHR4.040e-3649.35V-type sodium ATPase catalytic subunit A OS=Entero... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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