CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEPX (V-type ATP synthase alpha chain OS=Thermoanaerobacter sp. (strain X514) GN=atpA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 6.891e-36
Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +VGAVSPPGGD S+PVT ATL +V+VFW LD +LA  +HFP++NWL SYS YS  +E +  +    D+  +R++A  +LQ E  L EIV+LVG D L+  D++ LE A+ +RED+L QNAF   D +    K   M++ I+ FY  A +A+EKG
Sbjct:  386 VVGAVSPPGGDLSEPVTQATLRVVKVFWALDSELAYARHFPAINWLTSYSLYSDVVEDYMNKNVSSDWGELRSEAMRLLQEEASLQEIVRLVGIDVLSTRDRLVLEVARSIREDFLHQNAFHEVDTYSSMEKQYRMLKLIMIFYQEAQKALEKG 539          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HALVO (V-type ATP synthase alpha chain OS=Halobacterium volcanii GN=atpA PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 9.000e-36
Identity = 79/158 (50.00%), Postives = 105/158 (66.46%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFP++NW  SYS Y   L+  F E  + D+   R  A +VL  E++L EIVQLVGKDAL E  ++TLE A+ LRE YL QNAF P D +C   K+  ++  I  F + A +A+E G  ++
Sbjct:  390 VIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPAINWNESYSLYQEQLDPWFVENVEDDWAEERQWAVDVLDEENELQEIVQLVGKDALPEDQQLTLEIARYLREAYLQQNAFHPTDTYCSPEKTYGILTAIHAFNDEAFKALEAGVPVE 547          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HALWD (V-type ATP synthase alpha chain OS=Haloquadratum walsbyi (strain DSM 16790) GN=atpA PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.535e-35
Identity = 79/157 (50.32%), Postives = 102/157 (64.97%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            +GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFPS+NW  SYS Y   L+  F E  + D+   R  A +VL  E +L EIVQLVGKDAL +  ++TLE A+ LRE YL QNAF P D +C   K+   +  I  F + A +A++ G  +D
Sbjct:  390 IGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPSINWDESYSLYKEQLDPWFQENVEDDWPEERQWAVDVLDEESELQEIVQLVGKDALPDDQQLTLEVARYLRESYLQQNAFHPVDTYCSPEKTYLTVTAIHQFNDEAFEALDAGVPVD 546          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_DEIGD (V-type ATP synthase alpha chain OS=Deinococcus geothermalis (strain DSM 11300) GN=atpA PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.834e-35
Identity = 71/158 (44.94%), Postives = 104/158 (65.82%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSP GGD S+PVT ATL I   FW LD  LA+R+HFP++NW  SYS ++  L+S+Y E    DF  +R +   +LQ+E  L E+VQLVG DAL + +++ +ET ++LR+D+L QN F P D      K+  +M+ ++ FY+ A  A+  G G+D
Sbjct:  383 VIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRHFPAINWNGSYSLFTPILDSWYRENVGRDFPELRQRISNLLQQEASLQEVVQLVGPDALQDQERLVIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMKMMLKFYDEAEAALRNGVGID 540          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_DEIDV (V-type ATP synthase alpha chain OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=atpA PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.300e-34
Identity = 70/158 (44.30%), Postives = 105/158 (66.46%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSP GGD S+PVT ATL I   FW LD  LA+R+HFP++NW  SYS ++  L+ +Y Q   PDF  +R +   +LQ+E  L E+VQLVG DAL + +++ +ET ++LR+D+L QN F P D      K+  +M+  + FY+ A+ A++ G+ +D
Sbjct:  383 VIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRHFPAINWNGSYSLFTPILDKWYRQNVGPDFPELRQRITNLLQQEAALQEVVQLVGPDALQDNERLIIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMKMFLKFYDEADLALKNGSTID 540          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOD6 (V-type ATP synthase alpha chain OS=Clostridium difficile (strain 630) GN=atpA PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.217e-34
Identity = 71/152 (46.71%), Postives = 105/152 (69.08%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEK 461
            +GAVSPPGGD S+PV+ ATL IV+VFWGLD  LA ++HFP++NWL SYS Y   ++ + ++  + +F   R +A ++LQ E +L EIVQLVG D+L++GD++ LE  + +RED+L QN+F   D +   +K   MM  I+ FY  A  A+++
Sbjct:  387 IGAVSPPGGDTSEPVSQATLRIVKVFWGLDASLAYKRHFPAINWLTSYSLYQEKVDVWADKNVNDNFSAQRAQAMKLLQVESELQEIVQLVGVDSLSDGDRLILEVTRSIREDFLHQNSFHEVDTYTSLHKQYRMMGLILKFYKSAQDAIKQ 538          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_DEIRA (V-type ATP synthase alpha chain OS=Deinococcus radiodurans GN=atpA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.781e-34
Identity = 70/158 (44.30%), Postives = 102/158 (64.56%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSP GGD S+PVT ATL I   FW LD  LA+R+HFP++NW  SYS ++  L+ +Y E   PDF  +R +   +LQ+E  L E+VQLVG DAL + +++ +ET ++LR+D+L QN F P D      K+  +M+  + FY+ A  A+  G  +D
Sbjct:  383 VIGAVSPAGGDMSEPVTQATLRITGAFWRLDAGLARRRHFPAINWNGSYSLFTPILDKWYRENVGPDFPELRQRIGSLLQQEAALQEVVQLVGPDALQDNERLIIETGRMLRQDFLQQNGFDPVDASASMPKNYGLMKMFLKFYDEAEAALRNGLTID 540          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HALOH (V-type ATP synthase alpha chain OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=atpA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.450e-34
Identity = 86/213 (40.38%), Postives = 122/213 (57.28%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKFKSCM-RI*PLVSRLEMN 638
            ++GAVSPPGGDFS+PVT  T   V+ FW LDK LA  +HFP+VNWL SYS+Y   L  +  E  + D+I +R  A E+L+ ED L EIV+LVG+D L +  ++ LE A+L++  +L QNAF+  D+F    K  WM++ I+  Y       EK   +    I  + +K+   +LF  ++  K   P      + KFK  M RI    +RL  N
Sbjct:  387 LIGAVSPPGGDFSEPVTQNTKRYVRCFWALDKSLASARHFPAVNWLESYSEYLEDLSGWLKENINEDWIKLRNMAMELLKEEDRLQEIVKLVGEDVLPDNQRLILEVARLIKIGFLQQNAFSKVDRFATPEKQYWMLKIIMFLY-------EKARPLIKNNIPISRVKN--NELFSEVIKMKENIP---NGDLDKFKDLMARIEEYYNRLWEN 587          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ENTFA (V-type ATP synthase alpha chain OS=Enterococcus faecalis GN=atpA PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.437e-33
Identity = 73/153 (47.71%), Postives = 101/153 (66.01%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            + AVSP GGD S+PVT  TL +V+VFWGLD +LAQ++HFPS+NWL SYS YST +  + + +   ++  +  +   +LQ E  L EIV+LVG D+L++ D++TLETAK LREDYL QNAF   D F    K   M++ I+ F     +A+  G
Sbjct:  387 ISAVSPSGGDISEPVTQNTLRVVKVFWGLDSQLAQKRHFPSINWLQSYSLYSTEVGQYLDLELQGNWAAMVAEGMRILQEESQLEEIVRLVGIDSLSDKDRLTLETAKSLREDYLQQNAFDDVDTFTSRTKQAKMLQLILTFGEEGQKALSLG 539          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_SULTO (V-type ATP synthase alpha chain OS=Sulfolobus tokodaii GN=atpA PE=1 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 2.451e-33
Identity = 71/154 (46.10%), Postives = 102/154 (66.23%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            I  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NW+  +S Y     + +++  DP++  +R    +VL RED+L +IV+LVG ++LAE DK+ LE AKL+++ +L QNA+   D F    K V +MR I  FYN +   + KG
Sbjct:  388 IASAVSPPGGDFTEPVTSNTLRFVRVFWPLDVSLAQARHYPAINWIQGFSAYVDLVAQWWHKNVDPNWKEMRDTMMKVLIREDELRQIVRLVGPESLAEKDKLVLEAAKLIKDAFLKQNAYDDIDAFSSPQKQVRIMRLIYIFYNQSQDLISKG 541          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_THEPX6.891e-3648.70V-type ATP synthase alpha chain OS=Thermoanaerobac... [more]
VATA_HALVO9.000e-3650.00V-type ATP synthase alpha chain OS=Halobacterium v... [more]
VATA_HALWD1.535e-3550.32V-type ATP synthase alpha chain OS=Haloquadratum w... [more]
VATA_DEIGD5.834e-3544.94V-type ATP synthase alpha chain OS=Deinococcus geo... [more]
VATA_DEIDV1.300e-3444.30V-type ATP synthase alpha chain OS=Deinococcus des... [more]
VATA_CLOD62.217e-3446.71V-type ATP synthase alpha chain OS=Clostridium dif... [more]
VATA_DEIRA3.781e-3444.30V-type ATP synthase alpha chain OS=Deinococcus rad... [more]
VATA_HALOH6.450e-3440.38V-type ATP synthase alpha chain OS=Halothermothrix... [more]
VATA_ENTFA1.437e-3347.71V-type ATP synthase alpha chain OS=Enterococcus fa... [more]
VATA_SULTO2.451e-3346.10V-type ATP synthase alpha chain OS=Sulfolobus toko... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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