CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METS5 (V-type ATP synthase alpha chain OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=atpA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.451e-33
Identity = 71/154 (46.10%), Postives = 101/154 (65.58%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   +  ++ +  DPD+  +R      L RED+L +IV+LVG ++LAE DK+TLE A+L++E +L QNA+   D F    K   +M+ I H+   A  AVE+G
Sbjct:  387 LASAVSPPGGDFTEPVTSTTLRFVRVFWPLDVSLAQARHYPAINWLQGFSSYVDLVSDWWIKNVDPDWRIMRDFMVRTLLREDELKQIVRLVGPESLAEKDKLTLEVARLIKEAFLKQNAYDDIDAFSSPQKQARIMKLIYHYNQYATNAVERG 540          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_SULAC (V-type ATP synthase alpha chain OS=Sulfolobus acidocaldarius GN=atpA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.201e-33
Identity = 70/154 (45.45%), Postives = 104/154 (67.53%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            I  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NW+  +S Y   + S++ +  DP +  +R+   ++L RED+L +IV+LVG ++L++ DK+ LE +KL+R+ +L QNAF   D F    K   +MR I  FY  A+Q ++KG
Sbjct:  388 IASAVSPPGGDFTEPVTSNTLRFVRVFWPLDVSLAQARHYPAINWIQGFSAYVDLVASWWHKNVDPTWFEMRSVLVKILLREDELRQIVRLVGPESLSDKDKLILEASKLIRDAFLKQNAFDDIDAFSSPQKQAKIMRLIYDFYTNASQLLDKG 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_NITMS (V-type ATP synthase alpha chain OS=Nitrosopumilus maritimus (strain SCM1) GN=atpA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.201e-33
Identity = 69/174 (39.66%), Postives = 113/174 (64.94%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG---AGMDGQKITYTLIKHRL 515
            ++GAVSP GGDF++PVT+ T+  ++ FW LD KLA  +H+PS+NW+ SYS Y   +  ++ E  + D++++R++   VLQRED L EIV+L+G +AL + +K+ LE A++++   L QN+F   D +C   K   +M+ ++ FY    QA+++G   A +   K   TL+K R+
Sbjct:  388 LIGAVSPSGGDFTEPVTTHTMRFIKTFWALDAKLAYSRHYPSINWMNSYSGYLADIAKWWGENINEDWLSLRSEVYGVLQREDTLKEIVRLLGPEALPDEEKLILEVARMVKIGLLQQNSFDDVDTYCSPEKQYKLMKLLVDFYKKGQQAIKEGTPLADIRAMKSITTLLKARM 561          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HALSA (V-type ATP synthase alpha chain OS=Halobacterium salinarium GN=atpA PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.314e-33
Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFP++NW  SYS Y   L+  F +    D+   R  A ++L  E +L EIVQLVGKDAL E  ++TLE A+ +RE +L QNA    D++CP  K+  ++  I   +  + +A++ G  ++
Sbjct:  387 VIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCPPEKTYAILSGIKTLHEESFEALDAGVPVE 544          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HALS3 (V-type ATP synthase alpha chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=atpA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.314e-33
Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFP++NW  SYS Y   L+  F +    D+   R  A ++L  E +L EIVQLVGKDAL E  ++TLE A+ +RE +L QNA    D++CP  K+  ++  I   +  + +A++ G  ++
Sbjct:  387 VIGAVSPPGGDFSEPVTQNTLRIVKTFWALDSDLAERRHFPAINWDESYSLYKDQLDPWFTDNVVDDWAEQRQWAVDILDEESELEEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNALHDVDRYCPPEKTYAILSGIKTLHEESFEALDAGVPVE 544          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_HALMA (V-type ATP synthase alpha chain OS=Haloarcula marismortui GN=atpA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.314e-33
Identity = 75/158 (47.47%), Postives = 101/158 (63.92%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGDFS+PVT  TL IV+ FW LD  LA+R+HFPS+NW  SYS Y   L+ ++E     D+   R  A + L  E +L EIVQLVGKDAL E  ++TLE A+ LRE +L QNAF   D FC   K+  +M     + + A +A++ G  ++
Sbjct:  390 VIGAVSPPGGDFSEPVTQNTLRIVKTFWALDADLAERRHFPSINWNESYSLYRDQLDPWFEDNVRADWPETRQWAIDTLDEEAELQEIVQLVGKDALPEDQQLTLEIARYLREAWLQQNAFHDVDTFCEPEKTYRIMDAAKTYNDAAFEALDAGVPVE 547          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_NANEQ (V-type ATP synthase alpha chain OS=Nanoarchaeum equitans GN=atpA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.589e-32
Identity = 66/152 (43.42%), Postives = 101/152 (66.45%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEK 461
            I+GAVSPPGGDFS+PVT  TL +V   W LD KLA ++H+P++N+LISY+K    ++ ++E+   D I IR +   +L+RE +L +IV +VG DAL++ +KI L   +++RE +L Q+AF   D + P  K++ +MR I  +Y    Q + K
Sbjct:  375 IIGAVSPPGGDFSEPVTQNTLRLVGALWALDSKLAYKRHYPAINYLISYTKQWEFVKKYFEELYEDVIEIREEFFAILKRESELMDIVSIVGPDALSDNEKIYLHMGRIIREGFLQQDAFDENDSYSPLEKTIELMRIIHKYYVTVKQLLGK 526          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBB (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=atpA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.710e-32
Identity = 70/153 (45.75%), Postives = 101/153 (66.01%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +GAVSPPGGD S+PV+ +TL IV+VFWGLD +LA ++HFP++NWL SYS Y+  ++ +       ++  +R +A  +LQ E  L EIV+LVG DAL+E D++ L+ AK +REDYL QN F   D +    K   M+  I+ +   A +A+E G
Sbjct:  387 IGAVSPPGGDISEPVSQSTLRIVKVFWGLDAQLAYQRHFPTINWLTSYSLYADTIDKWMNGNVAENWGALRLEAMTILQDEAQLQEIVRLVGIDALSEKDRLKLDVAKSIREDYLQQNGFHEIDTYTSLKKQYKMLNLILGYRKEAERALEAG 539          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CLOBA (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=atpA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.539e-32
Identity = 70/153 (45.75%), Postives = 101/153 (66.01%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +GAVSPPGGD S+PV+ +TL IV+VFWGLD +LA ++HFP++NWL SYS Y+  ++ +       ++  +R +A  +LQ E  L EIV+LVG DAL+E D++ L+ AK +REDYL QN F   D +    K   M+  I+ +   A +A+E G
Sbjct:  387 IGAVSPPGGDISEPVSQSTLRIVKVFWGLDAQLAYQRHFPTINWLTSYSLYADTIDKWMNGNVAENWGALRLEAMTILQDEAQLQEIVRLVGIDALSEKDRLKLDVAKSIREDYLQQNGFHEIDTYTSLKKQYKMLSLILGYRKEAERALEAG 539          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_SULSO (V-type ATP synthase alpha chain OS=Sulfolobus solfataricus GN=atpA PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.030e-31
Identity = 70/154 (45.45%), Postives = 100/154 (64.94%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            +  AVSPPGGDF++PVTS TL  V+VFW LD  LAQ +H+P++NWL  +S Y   + +++    DP +  +R      L RED+L +IV+LVG ++LAE DK+ LETA+L++E +L QNA+   D F    K   +MR I  F   A++ VE+G
Sbjct:  387 VASAVSPPGGDFTEPVTSQTLRFVKVFWPLDVSLAQARHYPAINWLQGFSAYVDLVANWWNTNVDPKWREMRDMMVRTLIREDELRQIVRLVGPESLAEKDKLILETARLIKEAFLKQNAYDDIDAFSSPQKQARIMRLIYLFNTYASKLVERG 540          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_METS52.451e-3346.10V-type ATP synthase alpha chain OS=Metallosphaera ... [more]
VATA_SULAC3.201e-3345.45V-type ATP synthase alpha chain OS=Sulfolobus acid... [more]
VATA_NITMS3.201e-3339.66V-type ATP synthase alpha chain OS=Nitrosopumilus ... [more]
VATA_HALSA9.314e-3344.94V-type ATP synthase alpha chain OS=Halobacterium s... [more]
VATA_HALS39.314e-3344.94V-type ATP synthase alpha chain OS=Halobacterium s... [more]
VATA_HALMA9.314e-3347.47V-type ATP synthase alpha chain OS=Haloarcula mari... [more]
VATA_NANEQ1.589e-3243.42V-type ATP synthase alpha chain OS=Nanoarchaeum eq... [more]
VATA_CLOBB2.710e-3245.75V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_CLOBA3.539e-3245.75V-type ATP synthase alpha chain OS=Clostridium bot... [more]
VATA_SULSO1.030e-3145.45V-type ATP synthase alpha chain OS=Sulfolobus solf... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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