CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ANAD2 (V-type ATP synthase alpha chain OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=atpA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.247e-29 Identity = 69/171 (40.35%), Postives = 107/171 (62.57%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPD-FINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRL 515 +VGAVSPPGGD S+PVT +L W L LA R+H+P+V+W +S++ L ++E+ D F +R +AR++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A P D CP K+ M+R + ++ A AV GAG+ + I T + RL Sbjct: 379 MVGAVSPPGGDLSEPVTQCSLRATGALWALSADLAHRRHYPAVDWSVSFTLEGDRLAGWFEREAGDGFGALRDEARKLLQRERELAEVAELVGTESLQDAERLVLESARLLREGFLRQSALDPADATCPPAKAFEMLRLFLEWHRRAGAAV--GAGVPLRSILDTGLGARL 547
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ANADE (V-type ATP synthase alpha chain OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=atpA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.159e-29 Identity = 68/171 (39.77%), Postives = 107/171 (62.57%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPD-FINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRL 515 +VGAVSPPGGD S+PVT +L W L LA R+H+P+V+W +S++ L ++E+ D F +R +AR++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A P D CP K+ M+R + ++ A A+ GAG+ + I T + RL Sbjct: 379 MVGAVSPPGGDLSEPVTQCSLRATGALWALSADLAHRRHYPAVDWSVSFTLEGDRLAGWFEREAGDGFGALRDEARKLLQRERELAEVAELVGTESLQDAERLVLESARLLREGFLRQSALDPADATCPPAKAFEMLRLFLEWHRRAGAAI--GAGVPLRSILDTGLGARL 547
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ANADF (V-type ATP synthase alpha chain OS=Anaeromyxobacter sp. (strain Fw109-5) GN=atpA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.818e-28 Identity = 68/180 (37.78%), Postives = 109/180 (60.56%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVS 542 IVGAVSPPGGD S+PVT +L W L LA R+H+P+V+W IS+S + L ++E + F +R +A ++LQRE +L E+ +LVG ++L + +++ LE+A+LLRE +L Q+A+ P D CP K++ M+R + + A A+ G + +++++ LG RL S Sbjct: 378 IVGAVSPPGGDLSEPVTQCSLRATGALWALSADLAHRRHYPAVDWAISFSLEAERLRGWFEREAGEGFGALRDEAMKLLQRERELVEVAELVGTESLQDAERLVLESARLLREGFLRQSAYDPVDASCPPRKALEMLRLHLELHGRAVNAIAGGVPL------HSILEAGLGARLLRLGS 551
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRIL (V-type ATP synthase alpha chain OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=atpA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27 Identity = 58/154 (37.66%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 I +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL+++S+Y +E ++ + PD+ IR + +L +E +L EIV+++G +AL+E +K L A ++RE +L Q+A+ P D K +M+ I +Y +A+E G Sbjct: 390 IAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLLAFSRYVDTVEVWWSKNISPDWRKIRDTLQSILVKEAELQEIVRILGTEALSEYEKHILNVAYMIREGFLKQDAYNPVDTPSSPIKQYLLMKAIYAYYEEGLKAIEAG 543
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THEPD (V-type ATP synthase alpha chain OS=Thermofilum pendens (strain Hrk 5) GN=atpA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.974e-27 Identity = 54/158 (34.18%), Postives = 98/158 (62.03%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476 ++GAVSPPGGD+++PVT TL V W LD LA R+HFP++NWL S+S+Y+ +E ++ + P+F R +A +L ++ I +VG+ AL + ++ L T+++++E +L Q A + D FC K W+++ ++ F++ + + + K ++ Sbjct: 389 VLGAVSPPGGDYNEPVTIHTLRFVGTMWALDTDLAYRRHFPAINWLKSFSQYADIIERWWVKNVSPEFPKYRRRALRLLTVASEIEAIASVVGEGALPDDQRLILLTSEIIKEGFLRQTALSGEDVFCKPEKQYWLLKMMMDFFDKSYELIRKRVSIE 546
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRAE (V-type ATP synthase alpha chain OS=Pyrobaculum aerophilum GN=atpA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.222e-26 Identity = 57/154 (37.01%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 I +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL+++S+Y +E ++ + P++ IR + +L +E +L EIV+++G +AL+E +K L A ++RE +L Q+A+ P D K +M+ I +Y +A+E G Sbjct: 390 IAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLVAFSRYVDTVEVWWSKNVSPEWRRIRDALQSILVKEAELQEIVRILGTEALSEYEKHILNVAFMIREGFLKQDAYNPVDTPSAPIKQFLLMKAIYTYYEEGLKAIESG 543
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRCJ (V-type ATP synthase alpha chain OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=atpA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.443e-26 Identity = 57/154 (37.01%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 I +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL+++S+Y +E ++ + P++ IR + +L +E +L EIV+++G +AL+E +K L A ++RE +L Q+A+ P D K +M+ I +Y +A+E G Sbjct: 390 IAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLMAFSRYVDTVEVWWSKNVSPEWRRIRDVLQSILVKEAELQEIVRILGTEALSEYEKHILNVAFMIREGFLKQDAYNPVDTPTSPIKQFLLMKAIYVYYEEGLKAIEAG 543
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRAR (V-type ATP synthase alpha chain OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=atpA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.103e-25 Identity = 57/154 (37.01%), Postives = 96/154 (62.34%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 I +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL ++S+Y +E ++ + P++ IR + +L +E +L EIV+++G +AL+E +K L A ++RE +L Q+A+ P D K +M+ I +Y +A+E G Sbjct: 390 IAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLAAFSRYVDTVEVWWSKNVSPEWRKIRDSLQSLLVKEAELQEIVRILGTEALSEYEKHILNVAFMIREGFLKQDAYNPIDTPSAPIKQFLLMKAIYTYYEEGLKAIEAG 543
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THENV (V-type ATP synthase alpha chain OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=atpA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.457e-25 Identity = 57/154 (37.01%), Postives = 95/154 (61.69%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 I +VSPPGGDF++PVTS TL + FW L +LA +H+P+++WL ++S+Y +E ++ + ++ IR + +L +E +L EIV+++G +AL+E +K L A ++RE +L Q+AF P D K +M+ I +Y +A+E G Sbjct: 390 IAASVSPPGGDFTEPVTSNTLRFIGAFWPLSPRLAYSRHYPAIDWLAAFSRYVDTVEVWWSKNISTEWRRIRDTLQSLLVKEAELQEIVRILGTEALSEYEKHVLNVAFMIREGFLKQDAFNPVDTPSSPIKQFLLMKAIYAYYEEGMKAIEAG 543
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_NITOC (V-type ATP synthase alpha chain OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=atpA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.633e-24 Identity = 60/154 (38.96%), Postives = 91/154 (59.09%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYS-KYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGDFS+PVTS T IV+ FW L K LA +H+P+V+W S+S A + E D + R +A +L + ++L+ IV LVG +AL+ + LE A L++E L Q+A P D FC K ++ ++ Y+ + +E+G Sbjct: 384 LIGAVSPPGGDFSEPVTSHTKEIVRTFWALSKDLADARHYPAVSWRESFSDDIPVAARWWAEHIDKHWQAGRAEAMTLLTQAEELSRIVNLVGPEALSGTQRWILEGATLIKEGLLQQSALDPVDSFCAPEKQFVLLDLMLQIYHQGVELLEQG 537 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |