CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLTR (V-type ATP synthase alpha chain OS=Chlamydia trachomatis GN=atpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18 Identity = 49/144 (34.03%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYN 437 I GAVSP GG+F +PVT ATLS+V F GL K A + +PS++ +IS+SKY ++ E+ P + +A L+ ++ + +++VG++ ++ D ++L YL QNAF D +CPF + + + + H +N Sbjct: 394 ICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQIELFSLMNHIFN 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLTB (V-type ATP synthase alpha chain OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=atpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18 Identity = 49/144 (34.03%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYN 437 I GAVSP GG+F +PVT ATLS+V F GL K A + +PS++ +IS+SKY ++ E+ P + +A L+ ++ + +++VG++ ++ D ++L YL QNAF D +CPF + + + + H +N Sbjct: 394 ICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQIELFSLMNHIFN 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLTA (V-type ATP synthase alpha chain OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=atpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18 Identity = 49/144 (34.03%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYN 437 I GAVSP GG+F +PVT ATLS+V F GL K A + +PS++ +IS+SKY ++ E+ P + +A L+ ++ + +++VG++ ++ D ++L YL QNAF D +CPF + + + + H +N Sbjct: 394 ICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQIELFSLMNHIFN 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLT2 (V-type ATP synthase alpha chain OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=atpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.705e-18 Identity = 49/144 (34.03%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYN 437 I GAVSP GG+F +PVT ATLS+V F GL K A + +PS++ +IS+SKY ++ E+ P + +A L+ ++ + +++VG++ ++ D ++L YL QNAF D +CPF + + + + H +N Sbjct: 394 ICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGESVKQASRFLEEGAEIGKRIEVVGEEGISMEDMEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQIELFSLMNHIFN 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLMU (V-type ATP synthase alpha chain OS=Chlamydia muridarum GN=atpA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.227e-18 Identity = 49/144 (34.03%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYN 437 I GAVSP GG+F +PVT ATLS+V F GL K A + +PS++ +IS+SKY ++ E+ P + + KA L+ ++ + +++VG++ ++ D ++L YL QNAF D +CPF + + + + H ++ Sbjct: 394 ICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDSVAEILEKKVPGWGDSVKKASRFLEEGAEIGKRIEVVGEEGISMEDIEIFLKSELYDFCYLQQNAFDAEDCYCPFDRQIELFSLMSHIFS 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLPN (V-type ATP synthase alpha chain OS=Chlamydia pneumoniae GN=atpA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.909e-18 Identity = 49/144 (34.03%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYN 437 I GAVSP GG+F +PVT +TL++V F GL K A + +PS++ LIS+SKY + E+ + KA + L++ ++ + +++VG++ ++ D A+L YL QNAF P D +CPF + + + I ++ Sbjct: 394 ICGAVSPAGGNFEEPVTQSTLAVVGAFCGLSKARADARRYPSIDPLISWSKYLNQVGQILEEKVSGWGGAVKKAAQFLEKGSEIGKRMEVVGEEGVSMEDMEIYLKAELYDFCYLQQNAFDPVDCYCPFERQIELFSLISRIFD 537
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PARUW (V-type ATP synthase alpha chain OS=Protochlamydia amoebophila (strain UWE25) GN=atpA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.485e-17 Identity = 45/144 (31.25%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYN 437 I GAVSP GG+F +PVT ATLS+V F GL + + + +P+++ L+S+SKY + + + + +AR +L +++ + +++VG++ ++ D +T A+L YL QNAF D +CP + + + + I ++ Sbjct: 398 IGGAVSPAGGNFEEPVTQATLSVVGAFLGLSRARSDSRRYPAIDPLLSWSKYVDTVGNELSHQVDGWDQMVKRARHILFNGNEIGKRMEVVGEEGISMEDMLTYLKAELYDFSYLQQNAFDKEDAYCPLKRQIALFQLINQIFD 541
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLAB (V-type ATP synthase alpha chain OS=Chlamydophila abortus GN=atpA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.485e-17 Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 404 I GAVSP GG+F +PVT ATLS+V F GL K A + +PS++ +IS+SKY + E + KA L+ ++ + +++VG++ + D ++L YL QNAF P D +CPF + + Sbjct: 394 ICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDQVGEILEDKVQGWGEAVKKANYFLREGSEIGKRMEVVGEEGIPMEDMEIYLKSELYDFCYLQQNAFDPVDCYCPFDRQI 526
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CHLCV (V-type ATP synthase alpha chain OS=Chlamydophila caviae GN=atpA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.084e-16 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSV 404 I GAVSP GG+F +PVT ATLS+V F GL K A + +PS++ +IS+SKY + E + KA L+ ++ + +++VG++ + D A+L YL QNAF D +CPF + + Sbjct: 394 ICGAVSPAGGNFEEPVTQATLSVVGAFCGLSKARADARRYPSIDPMISWSKYLDQVGDILENKIQGWGKAVKKANYFLREGSEIGKRMEVVGEEGIPMEDMEIYLKAELYDFCYLQQNAFDAVDCYCPFDRQI 526
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_BORHD (V-type ATP synthase alpha chain OS=Borrelia hermsii (strain DAH) GN=atpA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15 Identity = 42/122 (34.43%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 12 GAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYD 377 G+VSP GG+F +PVT ATL +V F GL ++ + + FP++N L S+SKY +E ++ AR+ L + +++N+++++VG++ ++ GD + ++LL YL QN+F D Sbjct: 392 GSVSPAGGNFEEPVTQATLKVVGAFHGLTRERSDARKFPAINPLESWSKYRGVVEFGKTEY----------ARDFLAKGNEINQMMKVVGEEGISNGDFLVYLKSELLDSCYLQQNSFDSVD 503 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |