CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12612 contig Ccv1_Contig12612:1433..2102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PLAFA (V-type proton ATPase catalytic subunit A OS=Plasmodium falciparum GN=vapA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.075e-55
Identity = 104/195 (53.33%), Postives = 139/195 (71.28%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKF 590
            IVGAVSPPGGDFSDPVT+AT+SIVQ FWGLDKKLAQRKHFPSVNW  S+SKY   LE +++ FD DF+++R K  ++LQ+E DLN+IVQLVGKD+L+E  K+ +E AK++RED+L QNAF+ YD  CP  K+V MMR I HFY    + +++    + +KI +  I + L     ++   KFE+P+       K+
Sbjct:  400 IVGAVSPPGGDFSDPVTTATMSIVQAFWGLDKKLAQRKHFPSVNWSTSFSKYVRQLEQYFDNFDQDFLSLRQKISDILQQESDLNDIVQLVGKDSLSEDQKVVMEVAKIIREDFLQQNAFSDYDYMCPLQKTVGMMRIICHFYAQCLRTLQEYDSRE-RKIGWGSIYNTLRPTINKITHMKFENPKNSDEYFKKY 593          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PLAF7 (V-type proton ATPase catalytic subunit A OS=Plasmodium falciparum (isolate 3D7) GN=vapA PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.075e-55
Identity = 104/195 (53.33%), Postives = 139/195 (71.28%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKF 590
            IVGAVSPPGGDFSDPVT+AT+SIVQ FWGLDKKLAQRKHFPSVNW  S+SKY   LE +++ FD DF+++R K  ++LQ+E DLN+IVQLVGKD+L+E  K+ +E AK++RED+L QNAF+ YD  CP  K+V MMR I HFY    + +++    + +KI +  I + L     ++   KFE+P+       K+
Sbjct:  400 IVGAVSPPGGDFSDPVTTATMSIVQAFWGLDKKLAQRKHFPSVNWSTSFSKYVRQLEQYFDNFDQDFLSLRQKISDILQQESDLNDIVQLVGKDSLSEDQKVVMEVAKIIREDFLQQNAFSDYDYMCPLQKTVGMMRIICHFYAQCLRTLQEYDSRE-RKIGWGSIYNTLRPTINKITHMKFENPKNSDEYFKKY 593          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_NEUCR (V-type proton ATPase catalytic subunit A OS=Neurospora crassa GN=vma-1 PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.252e-52
Identity = 100/194 (51.55%), Postives = 139/194 (71.65%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAK 587
            IVGAVSPPGGDFSDPVTSATL IVQVFWGLDKKLAQRKHFPS+N  +SYSKY T L+ +YE+  PDF  +R + R++L   ++L+++VQLVGK AL++ DKITL+ A L++ED+L QN ++ YD+FCP +K+ WMM+ ++ F++ A +A+ +G         +  ++    DL  +L S KFE P +    + K
Sbjct:  402 IVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINTSVSYSKYLTILDKWYEREYPDFPRLRDRIRQLLSDSEELDQVVQLVGKSALSDPDKITLDMATLIKEDFLQQNGYSDYDQFCPIWKTEWMMKLMMGFHDEAQKAIAQGQ-------NWNKVREATQDLQAQLKSLKFEVPSEGQEKICK 588          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_YEAST (V-type proton ATPase catalytic subunit A OS=Saccharomyces cerevisiae GN=TFP1 PE=1 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 4.601e-48
Identity = 93/187 (49.73%), Postives = 129/187 (68.98%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IV AVSP GGDFSDPVT+ATL I QVFWGLDKKLAQRKHFPS+N  +SYSKY+  L  FY+   P+F  +R + +E+L   ++L ++VQLVGK AL++ DKITL+ A L++ED+L QN ++ YD FCP +K+  MMR  I +++ A +AV  GA        ++ +    GD+ + + S KF +P +
Sbjct:  867 IVAAVSPAGGDFSDPVTTATLGITQVFWGLDKKLAQRKHFPSINTSVSYSKYTNVLNKFYDSNYPEFPVLRDRMKEILSNAEELEQVVQLVGKSALSDSDKITLDVATLIKEDFLQQNGYSTYDAFCPIWKTFDMMRAFISYHDEAQKAVANGA-------NWSKLADSTGDVKHAVSSSKFFEPSR 1046          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_CANTR (V-type proton ATPase catalytic subunit A OS=Candida tropicalis GN=VMA1 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.601e-48
Identity = 92/187 (49.20%), Postives = 128/187 (68.45%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IV AVSP GGDFSDPVT++TL I QVFWGLDKKLAQRKHFPS+N  +SYSKY+  L  +Y+   P+F  +R K RE+L   ++L ++VQLVGK AL++ DKITL+ A L++ED+L QN ++ YD FCP +K+  MMR  I +Y+ A +A+  GA        ++ +     D+ + + S KF +P +
Sbjct:  884 IVAAVSPAGGDFSDPVTTSTLGITQVFWGLDKKLAQRKHFPSINTSVSYSKYTNVLNKYYDSNYPEFPQLRDKIREILSNAEELEQVVQLVGKSALSDSDKITLDVATLIKEDFLQQNGYSSYDAFCPIWKTFDMMRAFISYYDEAQKAIANGA-------QWSKLAESTSDVKHAVSSAKFFEPSR 1063          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_ASHGO (V-type proton ATPase catalytic subunit A OS=Ashbya gossypii GN=VMA1 PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.933e-46
Identity = 87/187 (46.52%), Postives = 128/187 (68.45%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQK 566
            IV AVSP GGDFSDPVT++TL I QVFWGLDKKLAQRKHFPS+N  +SYSKY+  L  +Y+   P+F  +R + +E+L   ++L ++VQLVGK AL++ DKI L+ A L++ED+L QN ++ YD FCP +K+  MM+  + +++ A ++V  GA        + ++    GD+ + + S KF +P +
Sbjct:  413 IVAAVSPAGGDFSDPVTTSTLGITQVFWGLDKKLAQRKHFPSINTSVSYSKYTNVLNKYYDSNYPEFPVLRDRIKEILSNAEELEQVVQLVGKSALSDKDKIVLDVATLIKEDFLQQNGYSTYDAFCPIWKTYDMMKAFVSYFDEAQKSVSNGA-------NWAVLSEATGDVKHAVSSSKFFEPSR 592          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METKA (V-type ATP synthase alpha chain OS=Methanopyrus kandleri GN=atpA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.532e-43
Identity = 85/158 (53.80%), Postives = 114/158 (72.15%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            +VGAVSPPGGDFS+PVT  TL IV+VFW LD KLA R+HFP++NWL SYS Y   +E ++ E+   D+  +R +A E+LQRE +L EIVQLVG DAL E +++ LE A+++RED+L QNAF   D +CP  K   M++ I+HF   A +AV+KG  +D
Sbjct:  390 VVGAVSPPGGDFSEPVTQNTLRIVKVFWALDSKLADRRHFPAINWLQSYSLYLDDVEKWWHEEIGGDWRELRDEAMEILQRESELEEIVQLVGPDALPESERLILEVARMIREDFLQQNAFHEVDTYCPPEKQYEMLKTILHFKERAEEAVDKGVPVD 547          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METBU (V-type ATP synthase alpha chain OS=Methanococcoides burtonii (strain DSM 6242) GN=atpA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.693e-42
Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 476
            ++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFPS+NWL SYS Y+  L  +Y E    D+  +R  A ++LQ+E +L EIVQLVG DAL E  ++TLE A+++RE +L QNAF P D +CPF K   ++++I  +  LA  A+E G  M+
Sbjct:  380 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPSINWLTSYSLYTQGLADWYSENVGADWTQLRDDAMDLLQQESELQEIVQLVGSDALPEDQQLTLEVARMVREYFLQQNAFHPVDTYCPFDKQYKLLKSITRYGELATAALESGVPMN 537          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METB6 (V-type ATP synthase alpha chain OS=Methanoregula boonei (strain 6A8) GN=atpA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40
Identity = 87/171 (50.88%), Postives = 118/171 (69.01%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRL 515
            ++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFP++NWL SYS Y  AL  +Y++   PD+  +R+ A  VLQ+E +L EIVQLVG DAL E ++IT+E A+++RE +L QNA+   D FC   K   MM+ I  + +LAN A  + AG+   +IT    K+ L
Sbjct:  389 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYLDALHDWYDKNVSPDWNKLRSWAMGVLQKEAELQEIVQLVGSDALPETEQITIEVARMIREIFLQQNAYDAVDTFCDMQKQYDMMKAIRLYSDLANTA--QAAGVSPAQITTIKAKNEL 557          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_PYRAB (V-type ATP synthase alpha chain OS=Pyrococcus abyssi GN=atpA PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.704e-40
Identity = 87/196 (44.39%), Postives = 130/196 (66.33%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFE-DPQKRTALVAK 587
            ++GAVSPPGGDFS+PV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  A++ ++ +  DP++  +R KA E+LQ+E +L EIV++VG DAL E ++  L  A++LREDYL Q+AF   D +CP  K V MMR +++FY+   +A+ +G  +  ++I    ++  +G +       KFE D  K  AL+ K
Sbjct:  817 VIGAVSPPGGDFSEPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDAVKDWWHKNVDPEWKAMRDKAMELLQKESELQEIVRIVGPDALPERERAILLVARMLREDYLQQDAFDEVDTYCPPEKQVTMMRVLLNFYDKTMEAISRGVPL--EEIAKLPVREEIGRM-------KFEPDVGKIKALIDK 1003          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_PLAFA5.075e-5553.33V-type proton ATPase catalytic subunit A OS=Plasmo... [more]
VATA_PLAF75.075e-5553.33V-type proton ATPase catalytic subunit A OS=Plasmo... [more]
VATA_NEUCR5.252e-5251.55V-type proton ATPase catalytic subunit A OS=Neuros... [more]
VATA_YEAST4.601e-4849.73V-type proton ATPase catalytic subunit A OS=Saccha... [more]
VATA_CANTR4.601e-4849.20V-type proton ATPase catalytic subunit A OS=Candid... [more]
VATA_ASHGO1.933e-4646.52V-type proton ATPase catalytic subunit A OS=Ashbya... [more]
VATA_METKA1.532e-4353.80V-type ATP synthase alpha chain OS=Methanopyrus ka... [more]
VATA_METBU1.693e-4252.53V-type ATP synthase alpha chain OS=Methanococcoide... [more]
VATA_METB62.070e-4050.88V-type ATP synthase alpha chain OS=Methanoregula b... [more]
VATA_PYRAB2.704e-4044.39V-type ATP synthase alpha chain OS=Pyrococcus abys... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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