CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12612 contig Ccv1_Contig12612:1433..2102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METM7 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38
Identity = 86/183 (46.99%), Postives = 122/183 (66.67%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKF 551
            IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY     AV KGA  D   I+   +K  +  + Y LV ++F
Sbjct:  386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLKIIMTFYKKGLDAVAKGA--DPAGISAVTVKGDIARMKY-LVEEEF 565          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METBF (V-type ATP synthase alpha chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=atpA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38
Identity = 76/154 (49.35%), Postives = 109/154 (70.78%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFP++NWL SYS Y  +L   F +   PD++ +R +A E+LQ E +L EIVQLVG DAL +  ++ LE  ++LRE +L QNAF P D + PF +   +++ I+ + + A +A++ G
Sbjct:  380 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFAQQYRILKAIMKWGDAAMEALKSG 533          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METTH (V-type ATP synthase alpha chain OS=Methanobacterium thermoautotrophicum GN=atpA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.305e-38
Identity = 78/155 (50.32%), Postives = 108/155 (69.68%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +VGAVSPPGGD S+PVT  TL I +VFW LD  LA ++HFPS++WL SYS Y  +++ ++    DP++   R +A  +LQ+E +L EIVQLVG DAL + ++ITLET +++RED+L QNA+   D +C   K   M+R II F+  A  A+EKGA
Sbjct:  387 VVGAVSPPGGDLSEPVTQNTLRICKVFWALDASLADKRHFPSIDWLQSYSLYIDSVQEWWASNVDPEWRKFRDEAMALLQKEAELQEIVQLVGPDALPDRERITLETTRMIREDFLQQNAYHEVDTYCSPSKQFEMLRTIIMFHRNATAALEKGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METM6 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.316e-38
Identity = 86/183 (46.99%), Postives = 121/183 (66.12%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKF 551
            IVGAVSPPGGDFS+PVTS TL IV+VFW LD  LA+R+HFP++NWL SYS Y   +  +++Q    D+ ++R +A  +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+   D +C   K   M++ I+ FY     AV KGA  D   I+   +K  +  + Y LV  +F
Sbjct:  386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLKIIMTFYKKGLDAVAKGA--DPAGISAVTVKGDIARMKY-LVEDEF 565          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THESM (V-type ATP synthase alpha chain OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=atpA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.637e-38
Identity = 79/176 (44.89%), Postives = 119/176 (67.61%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530
            ++GAVSPPGGD SDPV   TL +V+VFW LD  LA+R+HFP++NWL SYS Y  +++ +++   DP++  +R +A  +LQ+E +L EIV++VG DAL E +K  L  A++LREDYL Q+AF   D +C   K V MMR I++FY    +A++  AG+  ++I    ++  +G + Y
Sbjct:  385 VIGAVSPPGGDLSDPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDSIKDWWQNNVDPEWKAMRDEAMALLQKESELEEIVRIVGPDALPEREKAILLVARMLREDYLQQDAFHEVDTYCLPKKQVTMMRVILNFYRHTMRAID--AGIPVEEIAKLPVREEIGRMKY 558          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METBA (V-type ATP synthase alpha chain OS=Methanosarcina barkeri GN=atpA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.637e-38
Identity = 76/154 (49.35%), Postives = 108/154 (70.13%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464
            ++GAVSPPGGDFS+PVT  TL IV+VFW LD KL+QR+HFP++NWL SYS Y  +L   F +   PD++ +R +A E+LQ E +L EIVQLVG DAL +  ++ LE  ++LRE +L QNAF P D + PF +   +++ I+ + + A  A++ G
Sbjct:  380 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFDQQYKILKAIMKWGDAAMDALKSG 533          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA2_METHJ (V-type ATP synthase alpha chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.637e-38
Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEK 461
            I+GAVSPPGGDFS+P+T  TL I   FW LD  LA R+H+PSVNW+ SYS Y   +E ++ E+   D+   R +A  +LQ+E +L EIVQLVG DAL + +K+ LE AK++RED+L Q+A++  D FCP  K  WM++ II +Y+    A+ +
Sbjct:  381 IIGAVSPPGGDFSEPITQNTLRIAGTFWALDANLAYRRHYPSVNWIRSYSLYLEDVEDWFSEKVARDWYQFRGRAMYILQKEVELQEIVQLVGPDALPDKEKVVLEIAKIIREDFLQQSAYSDDDSFCPLEKQYWMLKIIIWYYDAIRAAMRR 533          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRZJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain JJA) GN=atpA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ + +   D+ +  T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+ NI+ F + AN A+E G+
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPN (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae GN=atpA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ + +   D+ +  T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+ NI+ F + AN A+E G+
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpA PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y  ++ ++ + +   D+ +  T+A   LQRE  L EIV+LVG D+L++ +++T+E AK +REDYL QNAF   D F  F K   M+ NI+ F + AN A+E G+
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_METM72.530e-3846.99V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_METBF2.530e-3849.35V-type ATP synthase alpha chain OS=Methanosarcina ... [more]
VATA_METTH3.305e-3850.32V-type ATP synthase alpha chain OS=Methanobacteriu... [more]
VATA_METM64.316e-3846.99V-type ATP synthase alpha chain OS=Methanococcus m... [more]
VATA_THESM5.637e-3844.89V-type ATP synthase alpha chain OS=Thermococcus si... [more]
VATA_METBA5.637e-3849.35V-type ATP synthase alpha chain OS=Methanosarcina ... [more]
VATA2_METHJ5.637e-3849.02V-type ATP synthase alpha chain 2 OS=Methanospiril... [more]
VATA_STRZJ9.616e-3851.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPN9.616e-3851.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPJ9.616e-3851.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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