CX295036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METM7 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38 Identity = 86/183 (46.99%), Postives = 122/183 (66.67%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKF 551 IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q D+ ++R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ FY AV KGA D I+ +K + + Y LV ++F Sbjct: 386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLKIIMTFYKKGLDAVAKGA--DPAGISAVTVKGDIARMKY-LVEEEF 565
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METBF (V-type ATP synthase alpha chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=atpA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.530e-38 Identity = 76/154 (49.35%), Postives = 109/154 (70.78%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y +L F + PD++ +R +A E+LQ E +L EIVQLVG DAL + ++ LE ++LRE +L QNAF P D + PF + +++ I+ + + A +A++ G Sbjct: 380 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFAQQYRILKAIMKWGDAAMEALKSG 533
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METTH (V-type ATP synthase alpha chain OS=Methanobacterium thermoautotrophicum GN=atpA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.305e-38 Identity = 78/155 (50.32%), Postives = 108/155 (69.68%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +VGAVSPPGGD S+PVT TL I +VFW LD LA ++HFPS++WL SYS Y +++ ++ DP++ R +A +LQ+E +L EIVQLVG DAL + ++ITLET +++RED+L QNA+ D +C K M+R II F+ A A+EKGA Sbjct: 387 VVGAVSPPGGDLSEPVTQNTLRICKVFWALDASLADKRHFPSIDWLQSYSLYIDSVQEWWASNVDPEWRKFRDEAMALLQKEAELQEIVQLVGPDALPDRERITLETTRMIREDFLQQNAYHEVDTYCSPSKQFEMLRTIIMFHRNATAALEKGA 541
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METM6 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpA PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.316e-38 Identity = 86/183 (46.99%), Postives = 121/183 (66.12%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKF 551 IVGAVSPPGGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q D+ ++R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ FY AV KGA D I+ +K + + Y LV +F Sbjct: 386 IVGAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLKIIMTFYKKGLDAVAKGA--DPAGISAVTVKGDIARMKY-LVEDEF 565
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_THESM (V-type ATP synthase alpha chain OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=atpA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.637e-38 Identity = 79/176 (44.89%), Postives = 119/176 (67.61%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 530 ++GAVSPPGGD SDPV TL +V+VFW LD LA+R+HFP++NWL SYS Y +++ +++ DP++ +R +A +LQ+E +L EIV++VG DAL E +K L A++LREDYL Q+AF D +C K V MMR I++FY +A++ AG+ ++I ++ +G + Y Sbjct: 385 VIGAVSPPGGDLSDPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDSIKDWWQNNVDPEWKAMRDEAMALLQKESELEEIVRIVGPDALPEREKAILLVARMLREDYLQQDAFHEVDTYCLPKKQVTMMRVILNFYRHTMRAID--AGIPVEEIAKLPVREEIGRMKY 558
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METBA (V-type ATP synthase alpha chain OS=Methanosarcina barkeri GN=atpA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.637e-38 Identity = 76/154 (49.35%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALES-FYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 464 ++GAVSPPGGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y +L F + PD++ +R +A E+LQ E +L EIVQLVG DAL + ++ LE ++LRE +L QNAF P D + PF + +++ I+ + + A A++ G Sbjct: 380 VIGAVSPPGGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFDQQYKILKAIMKWGDAAMDALKSG 533
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA2_METHJ (V-type ATP synthase alpha chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA2 PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.637e-38 Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 3 Query: 6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEK 461 I+GAVSPPGGDFS+P+T TL I FW LD LA R+H+PSVNW+ SYS Y +E ++ E+ D+ R +A +LQ+E +L EIVQLVG DAL + +K+ LE AK++RED+L Q+A++ D FCP K WM++ II +Y+ A+ + Sbjct: 381 IIGAVSPPGGDFSEPITQNTLRIAGTFWALDANLAYRRHYPSVNWIRSYSLYLEDVEDWFSEKVARDWYQFRGRAMYILQKEVELQEIVQLVGPDALPDKEKVVLEIAKIIREDFLQQSAYSDDDSFCPLEKQYWMLKIIIWYYDAIRAAMRR 533
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRZJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain JJA) GN=atpA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38 Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + D+ + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPN (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae GN=atpA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38 Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + D+ + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38 Identity = 79/154 (51.30%), Postives = 108/154 (70.13%), Query Frame = 3 Query: 9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467 +GAVSPPGGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + D+ + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541 The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 169
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bpback to top |