CX295036

Overview
NameCX295036
Unique NameCX295036
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPC (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=atpA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37
Identity = 79/154 (51.30%), Postives = 107/154 (69.48%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPB (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=atpA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.772e-37
Identity = 79/154 (51.30%), Postives = 107/154 (69.48%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRP3 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M3 GN=atpA PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 6.233e-37
Identity = 78/154 (50.65%), Postives = 107/154 (69.48%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL I++VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + + + ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIIKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQESNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_METLZ (V-type ATP synthase alpha chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=atpA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.233e-37
Identity = 80/171 (46.78%), Postives = 113/171 (66.08%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRL 515
            ++GAVSP GGDFS+PVT  TL IV+VFW LD  L++R+HFP++NWL SYS Y   L  +Y E+  PD+  +R+   EVLQ+E +L EIVQLVG DAL E ++IT+E A+++RE +L QN F P D +C   K + M + I  + +LA  A  + AG+   +I     K+ +
Sbjct:  384 VIGAVSPAGGDFSEPVTQNTLRIVKVFWALDANLSRRRHFPAINWLQSYSLYMAQLNDYYDEKVSPDWNKLRSWFMEVLQKEAELQEIVQLVGSDALPETEQITIEVARMMRELFLQQNGFDPVDTYCDLPKQLDMFKMIRTYADLAYAA--QAAGVPPSQILAVKAKNEM 552          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_IGNH4 (V-type ATP synthase alpha chain OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=atpA PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.233e-37
Identity = 81/196 (41.33%), Postives = 118/196 (60.20%), Query Frame = 3
Query:    6 IVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPQKRTALVAKF 590
            I  AVSPPGGDFS+PVTS T   V+VFW LD  LA  +H+P++NWL+SYS Y  T  + ++E   P +   R +   +L +ED+L EIV+LVG ++L+E DK+ +ETA++++E +L QNAF P D FC   K   MM+ II FY  A + V  G  +         +K  + +L     + + E+ +K   L A+F
Sbjct:  395 IASAVSPPGGDFSEPVTSHTRRFVRVFWALDASLAYARHYPAINWLVSYSLYVDTVAKWWHENISPKWKEYRDEMMSILLKEDELKEIVRLVGPESLSEPDKLIIETARIIKEAFLQQNAFDPIDAFCSPKKQFLMMKIIIDFYRKAKELVNAGVPV---ATIREAVKEEVAELIRSRFTVRNEELEKLEDLYARF 587          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPM (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M28 GN=atpA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPG (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=atpA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRPF (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=atpA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRP8 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M18 GN=atpA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
BLAST of CX295036 vs. ExPASy Swiss-Prot
Match: VATA_STRP6 (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M6 GN=atpA PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 8.140e-37
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 3
Query:    9 VGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 467
            +GAVSPPGGD S+PVT  TL IV+VFWGLD  LAQR+HFP++NWL SYS Y   + S+ + +   ++ N  T+A  +LQRE  L EIV+LVG D+L+E D++T+  A+ +REDYL QNAF   D F  F K   M+ NI+ F   A++A+  GA
Sbjct:  388 IGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLTMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541          
The following BLAST results are available for this feature:
BLAST of CX295036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
VATA_STRPC4.772e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPB4.772e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP36.233e-3750.65V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_METLZ6.233e-3746.78V-type ATP synthase alpha chain OS=Methanocorpuscu... [more]
VATA_IGNH46.233e-3741.33V-type ATP synthase alpha chain OS=Ignicoccus hosp... [more]
VATA_STRPM8.140e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPG8.140e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRPF8.140e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP88.140e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]
VATA_STRP68.140e-3751.30V-type ATP synthase alpha chain OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC05065H07SK DroRLeaf1 Citrus clementina cDNA clone C05065H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295036 ID=CX295036; Name=CX295036; organism=Citrus clementina; type=EST; length=670bp
GAGGCATTGTTGGTGCAGTTTCTCCTCCTGGAGGAGATTTCTCAGATCCT
GTAACATCTGCCACCCTCAGCATTGTGCAGGTCTTCTGGGGTCTGGATAA
GAAACTTGCGCAGAGAAAGCATTTTCCTTCTGTAAACTGGCTTATTTCTT
ACTCGAAGTATTCAACAGCATTAGAGTCTTTCTATGAGCAATTTGATCCG
GATTTTATTAACATCAGGACAAAGGCTAGAGAGGTGCTGCAGAGAGAAGA
TGACCTGAATGAAATTGTGCAACTTGTCGGAAAGGATGCTTTGGCTGAAG
GAGATAAGATTACGCTAGAGACTGCTAAGCTTTTGAGGGAGGACTATCTT
GCTCAGAACGCATTTACTCCATATGACAAGTTCTGCCCTTTCTACAAGTC
TGTTTGGATGATGCGTAACATTATCCATTTCTATAACTTGGCCAATCAGG
CCGTAGAGAAAGGAGCTGGTATGGATGGTCAGAAGATAACTTACACCCTT
ATCAAGCATCGGCTGGGAGATCTATTTTACAGATTAGTATCACAGAAGTT
TGAGGACCCACAGAAGAGAACAGCTCTGGTTGCTAAATTCAAAAGCTGCA
TGAGGATCTGACCGCTGGTTTCGCGCCTCGAGATGAACTCGATGATGAAG
GTCAGTAGATCTTGTATCAG
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