CX295040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_THET8 (60 kDa chaperonin OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=groL PE=1 SV=3) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 118/237 (49.79%), Postives = 163/237 (68.78%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLS-SDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ + L DIA +TGGTVI +E+G L+ +LG A +V +TKD TTIVG ++ + R+ I+ +E + +Y REKL ER+AKL+GGVAVI+VGA TETELKEKK R EDALNAT+AA TLLR S V+ + + L+ D E GA IV+RAL P + IA+NAG GSV+ +++L+ + N +YG+NAATG + D++ AGI+DP KV R L++A+S+ Sbjct: 276 APGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGD-EATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASI 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_THET2 (60 kDa chaperonin OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=groL PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 118/237 (49.79%), Postives = 163/237 (68.78%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLS-SDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ + L DIA +TGGTVI +E+G L+ +LG A +V +TKD TTIVG ++ + R+ I+ +E + +Y REKL ER+AKL+GGVAVI+VGA TETELKEKK R EDALNAT+AA TLLR S V+ + + L+ D E GA IV+RAL P + IA+NAG GSV+ +++L+ + N +YG+NAATG + D++ AGI+DP KV R L++A+S+ Sbjct: 276 APGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGD-EATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASI 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 120/236 (50.85%), Postives = 162/236 (68.64%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGGTVI +EVGL LDK + LG A+KV + K+ T IVG + D ++KRVAQI+ IE ++++EKL ER+AKL+GGVAVIQVGA TETE+K+KKLR+EDALNAT+AA + +D + + +EK G DIV+RAL PL+ IA NAG+ GSV+ EKV ++D G+NA TG + +++ AGI+DP KV R L++A+S+ Sbjct: 277 APGFGDRRKAMLQDIAILTGGTVITEEVGLKLDKATIDQLGRANKVRVKKEETIIVGGAGSTDEITKRVAQIKKQIEETTSEFDKEKLQERLAKLAGGVAVIQVGAATETEMKDKKLRIEDALNATRAAVEEGIVPGGGVAYISALKGLDGL--DAGSLDEKTGIDIVRRALEEPLRQIASNAGLEGSVIVEKVKNAD-PGIGFNALTGEFVNMIDAGIVDPAKVTRTALQNAASI 509
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_METFK (60 kDa chaperonin OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 121/236 (51.27%), Postives = 159/236 (67.37%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +EVGL+L+KV E LG A +V + K+ TTI+ +++ + R+ QI+ IE+A DY+REKL ER+AKL+GGVAVI+VGA TETE+KEKK RVEDAL+AT+AA LLR S + +K DN ++ G IV RA+ PL+ I NAG SVV KVL + YGYNA+ G Y DL+ G++DP KV R L++A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTVIAEEVGLSLEKVTLENLGQAKRVEIGKENTTIIDGAGSENNIKVRIDQIKKQIEDATSDYDREKLQERVAKLAGGVAVIKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARSSIKELKG--DNPDQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGTGN-YGYNASNGTYGDLVELGVLDPAKVTRSALQNAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_LACPL (60 kDa chaperonin OS=Lactobacillus plantarum GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 121/236 (51.27%), Postives = 162/236 (68.64%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ + L DIAILTGGTVI D++GL L + LG A+KV +TKD TTIV ++DA+S+RV IR I D+++EKL ER+AKL+GGVAV++VGA TETELKE+K R+EDALNAT+AA L+ + V A+KET D + G +IVKRAL P++ IA+NAG+ GSV+ EK + G+NAAT + D++ AGI+DPTKV R L++A+SV Sbjct: 276 APGFGDRRKEQLQDIAILTGGTVITDDLGLELKDTTIDQLGQANKVTVTKDNTTIVEGAGSKDAISERVEFIRNQIGETTSDFDKEKLQERLAKLAGGVAVVRVGAATETELKERKYRIEDALNATRAAVEEGFVAGGGTALINVIKDVAALKETGD---VQTGINIVKRALEEPVRQIAENAGLEGSVIVEK-MKEQKPGVGFNAATDEWVDMIKAGIVDPTKVTRSALQNAASV 507
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_DESRM (60 kDa chaperonin OS=Desulfotomaculum reducens (strain MI-1) GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 121/236 (51.27%), Postives = 162/236 (68.64%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +EVGL LDK ++LG A ++ + K+ T IVG Q + R+AQI+ IE D++REKL ER+AKL+GGVAVIQVGA TE E+KEKKLR++DALNAT+AA + + + +D+++ L+ D K G DIVKRAL PL+ IA NAG+ GSVV EKV ++ G+NA + Y D++AAGIIDP KV R L++A+S+ Sbjct: 277 APGFGDRRKAMLEDIAILTGGTVITEEVGLKLDKAELDMLGTARQIRVKKEETIIVGGAGEQAQIEGRIAQIKKQIEETTSDFDREKLQERLAKLAGGVAVIQVGAATEVEMKEKKLRIDDALNATRAAVEEGIVPGGGSAFVNIITTLDSVQ--LEGD-AKTGVDIVKRALEEPLRQIANNAGLEGSVVVEKVRTTGK---GFNAMSEEYVDMIAAGIIDPAKVTRSALQNAASI 506
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 119/236 (50.42%), Postives = 159/236 (67.37%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L DIAILTGGTVI +E+GL L+KV E LG A +VV+ KD TT+V Q+A+ R AQI+ IE + DY++EKL ER+AKLSGGVAVI+VGA TE E+KEKK RVEDAL+AT+AA L+R ++K+ + T DN+++ VG + RA+ PL+ I+ N+G SVV +V + D + YGYNA Y D++ GI+DPTKV R L+ ASS+ Sbjct: 278 APGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVQLEDLGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEESSSDYDKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALVRAAAKLSEL--TGDNEDQTVGVKLALRAMEAPLRQISINSGAEASVVVNEVKNGDGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSI 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_AGRT5 (60 kDa chaperonin OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=groL PE=3 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 117/236 (49.58%), Postives = 162/236 (68.64%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGGTVI +++G+ L+ V ++LG + KV ++K+ TTIV + + RVAQI+ IE DY+REKL ER+AKL+GGVAVI+VG TE E+KEKK R++DALNAT+AA LLR S+K+ +K ND+++ G +IV++AL ++ IA+NAG S+V K+L + YGYNA TG Y DL+A GI+DP KVVR L++A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGKSKKVSISKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALLRSSTKI-TVKGV--NDDQEAGINIVRKALQSLVRQIAENAGDEASIVVGKILDKNEDNYGYNAQTGEYGDLIALGIVDPVKVVRTALQNAASV 510
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_ACEP3 (60 kDa chaperonin OS=Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) GN=groL PE=3 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 115/236 (48.73%), Postives = 161/236 (68.22%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGG VI +++G+ L+ V +LG A KV + K+ TTIV D + RV QIR IE DY+REKL ER+AKL+GGVAVI+VG TE E+KE+K RV+DAL+AT+AA L R + K++ + ND+++VG DI++RAL PL+ IA NAG +G+V++ KVL + ++ +G++A G Y++L+ AGIIDP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGQVISEDLGIKLETVTLNMLGTAKKVHIDKENTTIVDGAGKADDIKGRVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARATLKLEGLH--YHNDDQRVGGDIIRRALQAPLRQIAHNAGEDGAVIANKVLENSDYNFGFDAQAGEYKNLVEAGIIDPAKVVRTALQDAASV 511
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH605_RHILO (60 kDa chaperonin 5 OS=Rhizobium loti GN=groL5 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.281e-57 Identity = 117/236 (49.58%), Postives = 156/236 (66.10%), Query Frame = 2 Query: 20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727 APGFG+R+ L+DIAILTGG VI +++G+ L+ VG +LG A KV ++K+ TTIV + + RVAQI+ IE DY++EKL ER+AKL+GGVAVI+VG TE E+KEKK RV+DALNAT+AA LLR S ++A+ N ++ G IV+RAL P + IA NAG S+V+ K+L + YGYNA TG Y D++A GI+DP KVVR L+ A+SV Sbjct: 278 APGFGDRRKAMLEDIAILTGGQVISEDLGIKLENVGLNMLGRAKKVSISKENTTIVDGAGKKAEIQGRVAQIKQQIEETTSDYDKEKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGVALLRASLSINAVGA---NSDQTAGISIVRRALQAPARQIAANAGAEASIVAGKILENKGATYGYNAQTGEYGDMIAMGIVDPVKVVRTALQDAASV 510 The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bpback to top |