CX295040

Overview
NameCX295040
Unique NameCX295040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_ENTAE (60 kDa chaperonin (Fragment) OS=Enterobacter aerogenes GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 119/236 (50.42%), Postives = 160/236 (67.80%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIA LTGGTVI +E+G+ L+K   E LG A +VV+ KDTTTI+     + A+  RVAQIR  IE A  DY+REKL ER+AKL+GGVAVI+VGA TE E+KEKK RV+DAL+AT+AA            L+R+++K+  +  T  N+++ VG  +  RA+  PL+ I  NAG   SVV+  V + D + YGYNAAT  Y +++  GI+DPTKV R  L++A+SV
Sbjct:  278 APGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKIAGL--TGQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDGN-YGYNAATEEYGNMIDFGILDPTKVTRSALQYAASV 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 115/236 (48.73%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L DIAILTGG  I +E G+ L+ V  ++LG A KV   KD TTI+G    +  +  R+AQI+  +E  + +++REKL ER+AKL+GGVAVI+VGA TE ELKEKK R+EDAL+ATKAA            LLR    +D +K  +DN++E++G +IV+R+L  PLKLIA NAG  GS+++EKV   D    GY+AA   + ++  AGI+DP KV R  L++A+S+
Sbjct:  278 APGFGDRRKAMLQDIAILTGGQFISEETGIKLENVTLDMLGRAEKVRANKDKTTIIGGKGNKKDIEARIAQIKKQLEETDSEFDREKLQERLAKLAGGVAVIKVGAATEVELKEKKHRIEDALSATKAAVEEGIVPGGGVALLRTIKALDDVK--VDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKVKEMDG-PMGYDAANDRFVNMFEAGIVDPAKVTRSALQNAASI 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_DESAP (60 kDa chaperonin OS=Desulforudis audaxviator (strain MP104C) GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 118/236 (50.00%), Postives = 161/236 (68.22%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+DIAILTGG V+ +EVGL LDK G ++LG A +V + KD T +V      DA++KR+AQI+  IE+   D++REKL ER+AKL+GGVAVI VGA TETE+KEKKLR+EDALNAT+AA             + +   ++ ++  L   +E+ G DI+KRAL  PL+ IA NAGV GS+V EKV  S     G++A +  Y D++ AGI+DP KV R  L++A+S+
Sbjct:  277 APGFGDRRKAMLEDIAILTGGRVVSEEVGLKLDKAGLDLLGKARQVRVKKDETIVVDGQGDADAITKRLAQIKKQIEDTTSDFDREKLQERLAKLAGGVAVINVGAATETEMKEKKLRIEDALNATRAAVEEGIVPGGGTVYVNVIPVLNGLEPEL--PDERTGVDIIKRALEAPLRQIANNAGVEGSIVVEKVKESP-AGVGFDALSEQYTDMIGAGIVDPAKVTRIALQNAASI 509          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 120/236 (50.85%), Postives = 158/236 (66.95%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+DIAILTGG VI +E+G  L+    + LG A +VV+ KD TTIV     +D++  R+ QI+  I     DY++EKL ER+AKLSGGVAVI+VGA TETE+KEKK RV+DALNATKAA            L++  ++V+    +L  D E +GA+IVKRAL  PL+ IA+NAG +  VV+  V  +D   YG+NAA+G Y D+  AGIIDP KV R  L++A SV
Sbjct:  277 APGFGDRRKAMLEDIAILTGGEVISEELGRTLESASLQDLGQADRVVIDKDNTTIVNGAGDKDSIEARINQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALNATKAAVEEGIVVGGGAALIKAGNRVNL---SLKGD-ELIGAEIVKRALFAPLRQIAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSV 508          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_AZOPC (60 kDa chaperonin OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=groL PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 117/240 (48.75%), Postives = 161/240 (67.08%), Query Frame = 2
Query:    8 CCS*APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            C   APGFG+R+ + L+DIA+LTGG VI +E GL L+ V  ++LG A KV ++KD T IV     + A+S RV+QI+T IE    DY+ EKL ER+AKL+GGVAV+ VGA +E E+KEKK RV+DAL+AT+AA             +R  S ++  K    N++E  G +IVKRA+  PL+ I +NAG  G+V++++V   +   +GYNA TG YEDL  AG+IDPTKV R  LE+A+S+
Sbjct:  274 CAVKAPGFGDRRKEMLEDIAVLTGGVVISEEKGLKLEGVTIDMLGTAEKVTISKDNTVIVNGAGEKSAISARVSQIKTQIEKTTSDYDSEKLQERLAKLAGGVAVLYVGAPSEVEMKEKKDRVDDALSATRAAIEEGTVPGGGVAYVRAISILEGFKGI--NEDETTGIEIVKRAIEEPLRQIVENAGKEGAVIAQRV-KEEKDDFGYNARTGIYEDLYVAGVIDPTKVARVALENAASI 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH603_RHILO (60 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 115/236 (48.73%), Postives = 158/236 (66.95%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+DIAILTGG VI +++G+ L+ VG ++LG A KV ++K+ TTIV     ++ +  RVAQI+  IE    DY++EKL ER+AKL+GGVAVI+VG  TE E+KEKK RV+DALNAT+AA            LLR S  ++A+     N ++  G  IV+RAL  P + IA NAG   S+V+ K+L +    +G+NA TG Y D++A GI+DP KVVR  L+ A+SV
Sbjct:  278 APGFGDRRKAMLEDIAILTGGQVISEDLGIKLENVGLDMLGRAKKVSISKENTTIVDGAGKKEEIQGRVAQIKQQIEETTSDYDKEKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGVALLRASLSINAVGA---NSDQTAGISIVRRALQAPARQIAANAGAEASIVAGKILENKGATFGFNAQTGEYGDMIAMGIVDPVKVVRTALQDAASV 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_RHOBA (60 kDa chaperonin 2 OS=Rhodopirellula baltica GN=groL2 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 116/240 (48.33%), Postives = 158/240 (65.83%), Query Frame = 2
Query:    8 CCS*APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            C   APGFG+R+   L DIA LTGGT+I +++G+ L+ V  E LG A KV + K  TTIV     ++ + KRVAQIR  IE  + DY++EK  ER+AKL+GGVAVI VGA+TE E+K+ K R+EDAL+AT+AA            L+     V+A K+    D EK+G DIV  AL  P++ IA N G++GSVV ++VL  ++ K G+NA TG Y D++ AG+IDP KVVR  L +A+S+
Sbjct:  273 CAVKAPGFGDRRKAMLGDIATLTGGTLISEDLGMQLENVTLEHLGRAKKVTVDKSNTTIVEGAGKREDIDKRVAQIRAQIEQTDSDYDKEKFQERLAKLAGGVAVISVGAETEAEMKQTKARLEDALHATRAAVEEGILPGGGVALVHCREAVEAAKKKAKGD-EKIGVDIVLGALDAPMRQIADNGGIDGSVVVDEVLQKNDPKIGFNAHTGEYTDMVKAGVIDPVKVVRTALTNAASI 511          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH602_RHIME (60 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.413e-56
Identity = 111/236 (47.03%), Postives = 162/236 (68.64%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+   L+DIAILTGGTVI +E+G+ L+    + LG A ++++ K+TTTIV    +++ +  RVAQI+  IE+   DY+REKL ER+AKL+GGVAVI+VG  TE E+KEKK RV+DAL+AT+AA            LLR+ S ++ +     ND+++VG +IV+RA+  P++ IA+NAG  GS++  K+    +  +G+NA TG + DL   G+IDP KVVR  L+ A+S+
Sbjct:  278 APGFGDRRKSMLEDIAILTGGTVISEELGIKLENTTMDTLGRAKRIMVDKETTTIVDGAGSKEDIGGRVAQIKAQIEDTTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRVVSALNGLATA--NDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKQDFAFGWNAQTGEFGDLFQMGVIDPAKVVRAALQDAASI 511          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_THEPX (60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56
Identity = 120/236 (50.85%), Postives = 157/236 (66.53%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+ + L DIAILTGG VI +E+G  L  V  ++LG A +V +TK+ TTIVG       + KRV QI+  IE    DY+REKL ER+AKL+GGVAVIQ GA TETELKEKK R+EDAL ATKAA            LL +   V  + ++LD D  K GA IV RAL  P++ IA NAGV+GSV+ EK+ ++ +  +GY+A    + D+  AGI+DPTKV R  L++A+S+
Sbjct:  276 APGFGDRRKEMLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGD-FKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASI 510          
BLAST of CX295040 vs. ExPASy Swiss-Prot
Match: CH60_THEP3 (60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groL PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.845e-56
Identity = 120/236 (50.85%), Postives = 157/236 (66.53%), Query Frame = 2
Query:   20 APGFGERKSQYLDDIAILTGGTVIRDEVGLALDKVGKEVLGNASKVVLTKDTTTIVGDGSTQDAVSKRVAQIRTLIENAEQDYEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSV 727
            APGFG+R+ + L DIAILTGG VI +E+G  L  V  ++LG A +V +TK+ TTIVG       + KRV QI+  IE    DY+REKL ER+AKL+GGVAVIQ GA TETELKEKK R+EDAL ATKAA            LL +   V  + ++LD D  K GA IV RAL  P++ IA NAGV+GSV+ EK+ ++ +  +GY+A    + D+  AGI+DPTKV R  L++A+S+
Sbjct:  276 APGFGDRRKEMLQDIAILTGGQVISEELGYDLKDVRLDMLGRARQVKVTKENTTIVGGAGDAAEIKKRVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIQAGAATETELKEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLDGD-FKTGAKIVLRALEEPVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASI 510          
The following BLAST results are available for this feature:
BLAST of CX295040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_ENTAE1.413e-5650.4260 kDa chaperonin (Fragment) OS=Enterobacter aerog... [more]
CH60_DICT61.413e-5648.7360 kDa chaperonin OS=Dictyoglomus thermophilum (st... [more]
CH60_DESAP1.413e-5650.0060 kDa chaperonin OS=Desulforudis audaxviator (str... [more]
CH60_CAMFF1.413e-5650.8560 kDa chaperonin OS=Campylobacter fetus subsp. fe... [more]
CH60_AZOPC1.413e-5648.7560 kDa chaperonin OS=Azobacteroides pseudotrichony... [more]
CH603_RHILO1.413e-5648.7360 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=... [more]
CH602_RHOBA1.413e-5648.3360 kDa chaperonin 2 OS=Rhodopirellula baltica GN=g... [more]
CH602_RHIME1.413e-5647.0360 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2... [more]
CH60_THEPX1.845e-5650.8560 kDa chaperonin OS=Thermoanaerobacter sp. (strai... [more]
CH60_THEP31.845e-5650.8560 kDa chaperonin OS=Thermoanaerobacter pseudethan... [more]

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Properties
Property NameValue
Genbank descriptionC05065H11SK DroRLeaf1 Citrus clementina cDNA clone C05065H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295040 ID=CX295040; Name=CX295040; organism=Citrus clementina; type=EST; length=728bp
GAGGGATTGCTGCTCTTAAGCTCCTGGTTTTGGAGAGCGCAAGAGCCAGT
ACCTTGACGACATTGCTATTTTGACTGGAGGAACTGTAATCAGAGATGAG
GTGGGACTTGCCTTGGACAAAGTTGGCAAGGAGGTCCTAGGTAATGCTTC
TAAAGTTGTGCTCACAAAGGATACCACCACCATTGTGGGGGATGGCAGCA
CCCAGGATGCAGTGAGCAAACGAGTGGCGCAAATCAGAACTCTAATTGAG
AACGCTGAGCAAGACTATGAAAGGGAGAAGCTTAATGAAAGAATTGCTAA
ACTGTCAGGTGGTGTTGCTGTCATACAGGTTGGAGCTCAAACTGAGACAG
AGCTTAAAGAGAAGAAGTTGAGAGTCGAAGATGCTCTTAATGCAACAAAG
GCTGCAGTTGAGGAAGGTATCGTAGTTGGTGGCGGATGTACTCTACTGAG
ACTCTCATCTAAGGTGGATGCCATTAAGGAAACCCTTGATAATGATGAAG
AAAAGGTTGGAGCAGATATTGTTAAAAGAGCTCTGTGCTACCCACTGAAA
TTAATTGCCAAAAATGCCGGTGTTAATGGAAGTGTGGTCAGCGAGAAGGT
GCTTTCAAGTGACAATCATAAATATGGATACAATGCTGCAACTGGAAACT
ACGAAGATCTAATGGCTGCAGGAATTATTGATCCTACCAAGGTGGTTAGA
TGTTGCTTGGAGCATGCTTCCTCGGTGG
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