CX295051

Overview
NameCX295051
Unique NameCX295051
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295051_ssr11 microsatellite CX295051_ssr11:11..22. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig82 contig Ccv1_Contig82:147..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.918e-37
Identity = 73/172 (42.44%), Postives = 120/172 (69.77%), Query Frame = 3
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISP 185          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.918e-37
Identity = 73/172 (42.44%), Postives = 120/172 (69.77%), Query Frame = 3
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISP 185          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.918e-37
Identity = 73/172 (42.44%), Postives = 120/172 (69.77%), Query Frame = 3
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+ +ER    L+GLLP  + + + Q ++  +        L +++ +  +++ NE LF++LL +++EE++P++YTPTVG+ACQ++  I+R  +GL+IS  ++ +I ++L++  + +++++VVTD ERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISP 185          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.985e-34
Identity = 79/173 (45.66%), Postives = 109/173 (63.01%), Query Frame = 3
Query:  216 GYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            G  +L  P  NKG+AFTE+ER    L+G LPP V++   Q K+           L K V +  L +RNE LFY+LL D++ E+LP+VYTPTVG A Q+Y   +R+P+GLY+S+ +   + E  K + ++S  I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI P
Sbjct:   18 GLEVLSVPFLNKGVAFTEEERKELGLKGFLPPKVLTIDDQAKRAYEQYSAQPDDLSKNVYLTALHDRNETLFYRLLNDHLGEMLPIVYTPTVGTAIQRYSHEYRKPRGLYLSIDDPDGMKEAFKQYKDQSDTIDLIVATDAEGILGIGDWGVGGIAISIGKLAVYTAAAGIDP 190          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.385e-33
Identity = 78/170 (45.88%), Postives = 107/170 (62.94%), Query Frame = 3
Query:  225 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERS--IQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +L  P  NKG+AF+ +ER    L GLLPP V+S   Q ++     +     L++ V + +L  RNE LFYKLL +++ E+LPVVYTPTVGEA Q+Y   +RRPQG+Y+S+     I +  +N    +  I +IV TD E ILG+GD G  G+ I +GKLA+YTA  GI P
Sbjct:   38 VLSIPTLNKGVAFSLEERQELGLEGLLPPTVLSLDQQAQRAYEQFQAQPDRLRQNVYLSDLANRNEVLFYKLLKNHLREMLPVVYTPTVGEAIQEYSHEYRRPQGIYLSIDNIDGIEKAFENLHATAGDIDLIVATDSESILGIGDWGVGGINIAIGKLAVYTAAAGIDP 207          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.627e-28
Identity = 70/170 (41.18%), Postives = 105/170 (61.76%), Query Frame = 3
Query:  228 LRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKN---WPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            L  P  N+G+ FT  +R    L G LP AV++   Q +++ + ++     L + + + +L  R+E L++K+L D++ EL+PVVYTPTVGEA Q++   +R  +GL++S+ E  +I E        PE  + +IV TD E ILG+GD G  G+ I VGKLALYTA GG+ P
Sbjct:   13 LSAPSLNRGVGFTHAQRRRLGLTGRLPSAVLTLDQQAERVWHQLQSLATELGRNLLLEQLHYRHEVLYFKVLADHLPELMPVVYTPTVGEAIQRFSDEYRGQRGLFLSIDEPDEIEEAFNTLGLGPE-DVDLIVCTDAEAILGIGDWGVGGIQIAVGKLALYTAGGGVDP 181          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.350e-27
Identity = 70/170 (41.18%), Postives = 96/170 (56.47%), Query Frame = 3
Query:  225 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQG-LYISLKEKGKILEVLKNWPE-RSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +L DP  NKG AFTE ER+   L GLLP  V + Q Q  +     +     L+K + +ME+   N  LFYKL   +V E +P+VY PT+ +  + Y  +F  PQG  ++ +     I   LKN    R I+++VV+D E ILG+GD G QG+ I VGKL +YT   GI P
Sbjct:    7 ILNDPFINKGTAFTEAEREELGLNGLLPAKVQALQEQVDQTYAQFQSKVSNLEKRLFLMEIFNTNHVLFYKLFSQHVVEFMPIVYDPTIADTIENYSELFVEPQGAAFLDINHPENIQSTLKNAANGRDIKLLVVSDAEGILGIGDWGVQGVDIAVGKLMVYTVAAGIDP 176          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.009e-27
Identity = 66/169 (39.05%), Postives = 100/169 (59.17%), Query Frame = 3
Query:  225 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNW-PERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            LL  P  NKG AFT++ER+A  L  LLPP V +   Q ++    +   + PL K   M  L  +N+ L++ L+  +++EL+P++YTPT G+A   Y   FR+P+G+++ + E   I   L  +  ++ +  IVV+D E ILG+GD G  G+ I + KLAL T  GGI P
Sbjct:  103 LLNSPLFNKGSAFTQEEREAFNLEALLPPQVNTLDEQLERSYKQLCYLKTPLAKNDFMTSLRVQNKVLYFALIRRHIKELVPIIYTPTEGDAIAAYSHRFRKPEGVFLDITEPDSIECRLATYGGDKDVDYIVVSDSEGILGIGDQGIGGVRIAISKLALMTLCGGIHP 271          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.166e-26
Identity = 72/170 (42.35%), Postives = 95/170 (55.88%), Query Frame = 3
Query:  225 LLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQ-GLYISLKEKGKILEVLKNWP-ERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +L +P  NKG AFT KER    L GLLPP V + + Q ++           L+K   +ME+   N  LFY L   ++ E  PVVY PT+ +  + Y  +F  PQ   Y+ +     I E LKN   +R I++IVVTD E ILG+GD G QG+ I VGKL +YTA  GI P
Sbjct:    6 ILNNPFLNKGTAFTMKERQELGLIGLLPPTVQTIEEQAEQTYEQYLTKPSDLEKRHFLMEIFNTNRTLFYYLFNKHIVEFNPVVYDPTIADTIENYSHLFVDPQYAAYLDINHPENITETLKNAAGDREIRLIVVTDAEGILGIGDWGTQGVDISVGKLMIYTAAAGIDP 175          
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24
Identity = 65/190 (34.21%), Postives = 106/190 (55.79%), Query Frame = 3
Query:  171 TEDQLVTPWTISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQY-EVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISL--KEKGKILEVLKNWPER-SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            T++Q+  P       G  LL  PR+NK  AFT +ER    +   LPP V + Q Q  +  +  +   + PLQK + + +L   N+ LFY L+  ++ E++P++YTPT G+A +++  I+R P+G Y+ +   +   I + L  + +  S++ I++TD E ILG+GD G  G+ I V K  L T   G+ P
Sbjct:    5 TKEQIECP-----LKGVTLLNSPRYNKDTAFTPEERQKFEISSRLPPIVETLQQQVDRCYDQYKAIGDEPLQKNLYLSQLSVTNQTLFYALISQHLIEMIPIIYTPTEGDAIKQFSDIYRYPEGCYLDIDHNDLSYIKQQLSEFGKSDSVEYIIITDSEGILGIGDQGVGGVLISVAKGHLMTLCAGLDP 189          
The following BLAST results are available for this feature:
BLAST of CX295051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_PSEAE1.918e-3742.44NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB1.918e-3742.44NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA81.918e-3742.44NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO3_BACSU1.985e-3445.66Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO2_BACSU6.385e-3345.88Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAOX_MYCTU1.627e-2841.18Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MLES_OENOE2.350e-2741.18Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MAOM_YEAST4.009e-2739.05NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MLES_LACLA1.166e-2642.35Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MAOX_SCHPO5.418e-2434.21NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC05068A10SK DroRLeaf1 Citrus clementina cDNA clone C05068A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295051 ID=CX295051; Name=CX295051; organism=Citrus clementina; type=EST; length=728bp
AGGGAGTGAGTGTTTGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAGTA
AAAAGAGTGAGAATGGAGAGCACCATGAAGGAGATGAGAGACGGAGCTTC
GGTTCTCGACTTCGACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGACG
TCTACGGTGAGGATCGTGCCACCGAGGACCAGCTCGTCACTCCCTGGACC
ATCTCTGTTGCCAGCGGGTACTGTTTGTTGAGGGATCCACGCCATAACAA
AGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCCCACTACTTGCGCGGCC
TTTTGCCTCCAGCTGTTATAAGTCAACAACTTCAGGAGAAGAAATTGATG
AACAGCATCAGACAATATGAAGTTCCGCTGCAAAAATATGTGGCCATGAT
GGAACTTGAGGAGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGATA
ATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAGCT
TGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATAAG
TCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGAAA
GGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGACTT
GGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGGAAATTGGCTTT
GTACACAGCACTTGGAGGCATTCGTCCC
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