CX295051

Overview
NameCX295051
Unique NameCX295051
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX295051_ssr11 microsatellite CX295051_ssr11:11..22. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig82 contig Ccv1_Contig82:147..874. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.043e-40
Identity = 80/172 (46.51%), Postives = 120/172 (69.77%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISP 187
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.043e-40
Identity = 80/172 (46.51%), Postives = 120/172 (69.77%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+ +ER    L GLLP  V S + Q ++     + ++  + K++ +  +++ NE LFY+L+ +++EE++PV+YTPTVG AC+++  I+RR +G++IS   +  + ++L+N P  +I+VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISP 187
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.043e-40
Identity = 81/172 (47.09%), Postives = 120/172 (69.77%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+ +ER+   L GLLP  V S + Q ++     + ++    K+V +  +++ NE LFY+LL +++EE++P++YTPTVG AC+ +  I+RR +GL+IS   +  I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   16 AGPILLEFPLLNKGSAFSIEERNDFNLNGLLPETVESIEEQAERAWRQFQDFKNNNDKHVYLRNIQDTNETLFYRLLDNHLEEMMPIIYTPTVGAACEHFSEIYRRARGLFISYPNRANIEDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISP 187
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.043e-40
Identity = 78/172 (45.35%), Postives = 121/172 (70.35%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+E+ER+   L GLLP A+ + + Q ++       +    ++++ +  +++ NE LFY+LL  ++ E++P++YTPTVGEAC+ +  I+RR +GL+I+   + +I ++L+N  +++++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   16 AGPILLEFPLLNKGSAFSEEERNTFNLNGLLPEAIETIEEQVERAYRQFCDFHSATEQHIYLRNIQDTNETLFYRLLRSHLSEMMPIIYTPTVGEACEHFSYIYRRARGLFIAYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISP 187
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_COLP3 (NAD-dependent malic enzyme OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sfcA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.043e-40
Identity = 78/172 (45.35%), Postives = 119/172 (69.19%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+++ER +  L GLLPP   S   Q ++       ++  + K++ +  + + NE LF+KL+ +N+ E++P++YTPTVG+AC+++  I+R  +GL+IS +++  I ++L+N  +  ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   13 AGPSLLETPLLNKGSAFSKEERGSFNLTGLLPPRFESIDEQAERAFRQYSCFQTNINKHIYLRAIHDNNETLFFKLVQNNLAEMMPIIYTPTVGDACEQFSDIYRSSRGLFISYEDRFNIDDMLRNATKNKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISP 184
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40
Identity = 77/172 (44.77%), Postives = 118/172 (68.60%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  LL  P  NKG AF+ +ER +  L GLLP    + Q Q ++     + +E  + K++ +  +++ NE L+Y+L+ +++ E++P++YTPTVG AC+ + +I+RR +GL+IS   + +I ++L N    +++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P
Sbjct:   13 AGPALLATPLLNKGSAFSGEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLYYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISP 184
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40
Identity = 77/172 (44.77%), Postives = 118/172 (68.60%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISP 184
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPC (NAD-dependent malic enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sfcA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40
Identity = 77/172 (44.77%), Postives = 118/172 (68.60%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISP 184
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40
Identity = 77/172 (44.77%), Postives = 118/172 (68.60%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISP 184
[Close]
BLAST of CX295051 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.199e-40
Identity = 77/172 (44.77%), Postives = 118/172 (68.60%), Query Frame = 3 
Query:  213 SGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGIRP 728
            +G  +L  P  NKG AF+E+ER    L GL+P A+ + + Q  +  +  R +   L K++ +  +++ NE LFY+L+ +N+ E++P++YTPTVG AC+++   +RR +GL+IS   K +I ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKL+LYT+ GGI P
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISP 184
The following BLAST results are available for this feature:
BLAST of CX295051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SALAR7.043e-4046.51NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_SALA47.043e-4046.51NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO1_ERWT97.043e-4047.09NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAO1_EDWI97.043e-4045.35NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]
MAO1_COLP37.043e-4045.35NAD-dependent malic enzyme OS=Colwellia psychreryt... [more]
MAO1_VIBHB9.199e-4044.77NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAO1_SHESW9.199e-4044.77NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEPC9.199e-4044.77NAD-dependent malic enzyme OS=Shewanella putrefaci... [more]
MAO1_SHEB99.199e-4044.77NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB89.199e-4044.77NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

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Properties
Property NameValue
Genbank descriptionC05068A10SK DroRLeaf1 Citrus clementina cDNA clone C05068A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295051 ID=CX295051; Name=CX295051; organism=Citrus clementina; type=EST; length=728bp
AGGGAGTGAGTGTTTGTTTGTTTTCGTTTTTGTGAAAAGCAGAAAAAGTA
AAAAGAGTGAGAATGGAGAGCACCATGAAGGAGATGAGAGACGGAGCTTC
GGTTCTCGACTTCGACTCGAAATCCACCGTCGAAGGCGGCGTTGAAGACG
TCTACGGTGAGGATCGTGCCACCGAGGACCAGCTCGTCACTCCCTGGACC
ATCTCTGTTGCCAGCGGGTACTGTTTGTTGAGGGATCCACGCCATAACAA
AGGGCTTGCTTTCACTGAGAAAGAGAGGGATGCCCACTACTTGCGCGGCC
TTTTGCCTCCAGCTGTTATAAGTCAACAACTTCAGGAGAAGAAATTGATG
AACAGCATCAGACAATATGAAGTTCCGCTGCAAAAATATGTGGCCATGAT
GGAACTTGAGGAGAGAAATGAAAGACTGTTCTATAAGCTACTGATTGATA
ATGTTGAGGAACTTCTCCCAGTCGTTTACACTCCAACTGTTGGTGAAGCT
TGCCAGAAATATGGAAGTATCTTCAGGCGTCCTCAGGGTCTATACATAAG
TCTGAAAGAGAAGGGAAAGATTCTTGAGGTTTTGAAGAACTGGCCTGAAA
GGAGTATTCAGGTTATTGTTGTCACAGATGGTGAGCGCATTTTGGGACTT
GGGGATCTTGGCTGTCAGGGGATGGGAATTCCTGTTGGGAAATTGGCTTT
GTACACAGCACTTGGAGGCATTCGTCCC
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