CX295053

Overview
NameCX295053
Unique NameCX295053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig651 contig Ccv1_Contig651:126..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LEC_LOTTE (Anti-H(O) lectin OS=Lotus tetragonolobus PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 77/248 (31.05%), Postives = 104/248 (41.94%), Query Frame = 1
Query:    4 VSFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWPAMISTT----------FTIRISPYPNTTDSADGMTFVFA-TDTSPP---TEXXXXXXXXXXXXXXXXAVELDTYKNDYWSDPDA---NHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFT 693
            VSF+++ F      DGSLI  G A   + G L++ +DP   +P     +  GR LY+ PV  W +               F IR   Y  T    DG+ F  A   T  P   T                 AVE D+Y N +  DP +   +H+GID+     N   SL +   +  SG   +  I YD  T IL V V  + N     I   I L   +P  V VGF+A+TG    E H +  W+FT
Sbjct:    1 VSFNYTEFK----DDGSLILQGDAKIWTDGRLAMPTDPLVNNPKTT--RSAGRALYATPVPIWDSATGNVASFVTSFNFLFVIRELKYTPT----DGLVFFLAPVGTEIPSGSTGGFLGIFDGSNGFNQFVAVEFDSYHNIW--DPKSLRSSHVGIDV-----NSIMSLKAVNWNRVSGSLEKATIIYDSQTNILSV-VMTSQNGQITTIYGTIDLKTVLPEKVSVGFSATTGNPEREKHDIYSWSFT 230          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LCS1_ROBPS (Seed agglutinin 1 OS=Robinia pseudoacacia PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 66/241 (27.39%), Postives = 103/241 (42.74%), Query Frame = 1
Query:    4 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTF 690
            +SFSF  F P       +    A+  S G L LT+  +   P     + +GR LY+ P   W       A   T+F+  I   PN   +ADG+ F  A   + P +                    AVE DT+ N ++ DP   HMGI++     N   S+ +   +  +G    V I Y+  TK L   + Y       +I   + + + +P  V  GF+A+TG D  + +++ VL W+F
Sbjct:   35 LSFSFPKFAPNQ--PYLIFQRDALVTSTGVLQLTNVVNGVPPR----RSIGRALYAAPFQIWDNTTGNVASFVTSFSFIIQA-PNPATTADGLAFFLAPVDTQPGDLGGMLGIFKDGSYNKSNQIVAVEFDTFSNIHF-DPKGRHMGINV-----NSIVSVKTVPWNWTNGEVANVFISYEASTKSLNASLVYPSLETSFIIHAIVDVKDVLPEWVRFGFSATTGIDTGYVQTNDVLSWSF 262          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LCB1_ROBPS (Bark agglutinin I polypeptide A OS=Robinia pseudoacacia PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 66/241 (27.39%), Postives = 103/241 (42.74%), Query Frame = 1
Query:    4 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTF 690
            +SFSF  F P       +    A+  S G L LT+  +         K +GR LY+ P   W       A   T+F+  I   PN T +ADG+ F  A   + P +                    AVE DT+ N ++ DP   HMGI++     N   S+ +   +  +G    V I Y+  TK L   + Y       ++   + + + +P  V  GF+A+TG D  + +++ VL W+F
Sbjct:   35 LSFSFPKFAPNQ--PYLIFQRDALVTSTGVLQLTNVVNGVPSG----KSLGRALYAAPFQIWDSTTGNVASFVTSFSFIIQA-PNPTTTADGLAFFLAPVDTQPLDVGGMLGIFKDGYFNKSNQIVAVEFDTFSNIHF-DPKGRHMGINV-----NSIVSIKTVPWNWTNGEVANVFISYEASTKSLTASLVYPSLETSFIVHAIVDVKDVLPEWVRFGFSATTGIDKGYVQTNDVLSWSF 262          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LECA_DOLLA (Lectin OS=Dolichos lab lab PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12
Identity = 73/240 (30.42%), Postives = 104/240 (43.33%), Query Frame = 1
Query:    4 VSFSFSSFNPKSCSDGSLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP-AMISTTFTIRISPYPNTTDS-ADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX-----AVELDT-YKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFTRS 699
            +SFSF+ F+P   +   LI  G  T       L S  +P S         GRVLYS P+  W  + + T+F   I  + N T   ADG+ F+   D+                          AVE DT Y N  + DP+  H+GID+     N  +S  ++  D ++G+    HI Y+  +K L V   Y G   +      I L   +P  V VG +ASTG +  E + V  W+FT S
Sbjct:    4 LSFSFTKFDP---NQEDLIFQGTATSK-----LDSAGNPVS------SSAGRVLYSAPLRLWEDSAVLTSFDPTIYIFTNYTSRIADGLAFIAPPDSVISYHGGFLGLFPNAAESGIAESNVVAVEFDTDYLNPDYGDPNYIHIGIDV-----NSIRSKVTASWDWQNGKIATAHISYNSVSKRLSVTTYYPGRG-KPATSYDIELHTVLPEWVRVGLSASTGQNI-ERNTVHSWSFTSS 222          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12
Identity = 73/247 (29.55%), Postives = 100/247 (40.49%), Query Frame = 1
Query:    4 VSFSFSSFNPKSCSDGSLICMGAVTPSYG--YLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATD--TSPPTEXXXXXXXXXXXXXXXX------AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQK--LIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 690
            +SF+F +F P       LI  G    S G   L LT   +   P +     VGR LY  P+  W       A   TTFT  +S    T +  DG+ F  A    T PP                        AVE DT+ N+ W DP   H+GID+     N  KS  +     ++G      I Y+  TK L V  +Y      +   +   + L   +P  V VGF+ STG  + ++H +L WTF
Sbjct:   39 LSFTFDNFRP---DQRDLILQGDAKISSGGDSLQLTKTDTSGKPVR---GSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLSS--PTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNNW-DPSHRHIGIDV-----NTIKSSATVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTG-GYVQNHNILSWTF 270          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LEC2_ULEEU (Anti-H(O) lectin 2 OS=Ulex europeus PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11
Identity = 66/248 (26.61%), Postives = 103/248 (41.53%), Query Frame = 1
Query:    4 VSFSFSSFNPKSCSDGSLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTT-DSADGMTFVFA-------TDTSPPTEXXXXXXXXXXXXXXXXAVELDTYKNDYWS--DPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPIL-LSETIPSSVYVGFTASTGPDFSESHQVLDWTFT 693
            +SF+F  F P   +  ++I  G A   + G L +T    P +      + +GR LY+ P+  W       A  +T+F+  +   P+   D  DG+ F  A       + +S                    AVE D+Y    ++  DPD  H+GID+     N  KS+ +   D ++G    V I Y   TK L V ++Y  +    ++    + L   +P  V VGF+   G      H VL W FT
Sbjct:    6 LSFNFDKFVP---NQKNIIFQGDASVSTKGVLEVTKVSKPTT------RSIGRALYAAPIQIWDSITGKVASFATSFSFVVKDEPDEKIDGVDGLAFFLAPANSQIPSGSSAGMFGLFCSSNDSKSSNQIIAVEFDSYFGKTYNPWDPDFKHIGIDV-----NSIKSIKTVKDDWRNGEVADVVITYRAPTKSLTVSLSYPSDGTSNIVTASSVDLKAILPEWVSVGFSGGVGNAAKFDHDVLSWYFT 239          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LEC_LATSP (Lectin OS=Lathyrus sphaericus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11
Identity = 59/190 (31.05%), Postives = 83/190 (43.68%), Query Frame = 1
Query:  151 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTE---XXXXXXXXXXXXXXXXAVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 690
            VGR LYS P+  W       A  + +FT  I P  ++   ADG TF  A  DT P  +                   AVE DT+ N  W DPD  H+G+DI ++ S   +  +    D  S      +I Y   T  L V V Y  +     +   + L + +P  V VG +AST   +S +H+V  W+F
Sbjct:   51 VGRALYSAPIHIWDRKTGKVADFTASFTFYIRPNSDSQVVADGFTFFIAPVDTQPRGDGGLLGVFNREEYDPTIHTVAVEFDTFHNQPW-DPDYIHIGVDINSIKSRITRPWNPH-YDTYS----IAYIAYKAATNELDVTVTYPNSRDYATLREVVDLKQIVPEWVRVGLSASTATYYS-AHEVYSWSF 233          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LEC1_LABAL (Lectin 1 OS=Laburnum alpinum PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11
Identity = 64/250 (25.60%), Postives = 101/250 (40.40%), Query Frame = 1
Query:    4 VSFSFSSFNPKSCSDGSLICMGAVTPSY-GYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP--------AMISTTFTIRISPYP---NTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX------AVELDTYKNDYWS--DPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTFT 693
            +SF+F  F P   +  +++  G  + S  G L +T         ++    + R LY+ P+ AW         A  +T+F+  +   P      D  DG+ F  A   S                          AVE DTY    ++  DPD  H+G+D+     N  KS+ +   D ++G    V I Y   TK L V ++Y  +    ++   + L   +P  V VGF+A  G     +H +L W FT
Sbjct:    4 LSFNFDKFVP---NQNNILFQGVASVSTTGVLQVT---------KVTNTGIKRALYAAPIHAWDDDSETGKVASFATSFSFVVKEPPIQSRKADGVDGLAFFLAPANSQIPSGSSAGMFGLFCSSDYNSSNQIIAVEFDTYFGKAYNPWDPDFKHIGVDV-----NSIKSIKTVKWDWRNGDVANVVITYRAPTKSLTVSLSYPSDQTSNIVTASVDLKAILPEWVSVGFSAGVGNAAKFNHDILSWYFT 236          
BLAST of CX295053 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11
Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  352 AVELDTYKN-DYWSDPDANHMGIDIANLTSN---PAKSLDSSG------IDLKSGRPIQVHIYYDGWTKILYVYVAYAG---NPLQKLIERPI-LLSETIPSSVYVGFTASTGPDFSESHQVLDWTFTRSHCLL 711
            AVE DT +     +D   NH+G++  +LTS+   P    D+          L+SG PI+  + YDG T+ L + V  A     P++ LI RP+  LS+ +   +YVGFTA+TG D S +H V+ W+F+    LL
Sbjct:  144 AVEFDTVQGFKDGADRTGNHIGLNFNSLTSDVQEPVVYYDNEDPNRKEDFPLQSGDPIRAILDYDGPTQTLNLTVYPANLKSRPVRPLISRPVPKLSQIVQEEMYVGFTAATGRDQSSAHYVMGWSFSSGGDLL 277          
The following BLAST results are available for this feature:
BLAST of CX295053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
LEC_LOTTE2.876e-1231.05Anti-H(O) lectin OS=Lotus tetragonolobus PE=1 SV=2[more]
LCS1_ROBPS2.876e-1227.39Seed agglutinin 1 OS=Robinia pseudoacacia PE=1 SV=... [more]
LCB1_ROBPS2.876e-1227.39Bark agglutinin I polypeptide A OS=Robinia pseudoa... [more]
LECA_DOLLA6.407e-1230.42Lectin OS=Dolichos lab lab PE=1 SV=1[more]
LEC2_CLALU8.368e-1229.55Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LEC2_ULEEU1.093e-1126.61Anti-H(O) lectin 2 OS=Ulex europeus PE=1 SV=1[more]
LEC_LATSP3.180e-1131.05Lectin OS=Lathyrus sphaericus PE=1 SV=1[more]
LEC1_LABAL3.180e-1125.60Lectin 1 OS=Laburnum alpinum PE=1 SV=1[more]
LRKA2_ARATH4.153e-1136.57Lectin-domain containing receptor kinase A4.2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC05068A12SK DroRLeaf1 Citrus clementina cDNA clone C05068A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295053 ID=CX295053; Name=CX295053; organism=Citrus clementina; type=EST; length=738bp
CCTGTTAGCTTCTCATTTTCCTCATTCAACCCAAAAAGTTGTAGCGATGG
CAGCCTAATTTGCATGGGCGCAGTGACTCCAAGTTATGGCTACTTGAGCC
TCACATCAGACCCTTCACCAGAATCGCCAGATCAGCTGCCGCTAAAAAAG
GTTGGACGGGTTTTATACAGCCAGCCTGTGACTGCATGGCCAGCTATGAT
TAGTACCACCTTCACCATTAGGATCTCACCCTACCCAAATACAACGGATT
CTGCAGATGGCATGACGTTTGTTTTTGCAACCGATACCAGCCCTCCAACT
GAAAACTCCGCCGGCGGAAATCTTGGACTGAGTAACGGTGTTTCGCAATT
AGCCGTGGAGCTGGACACTTACAAGAACGACTACTGGTCTGATCCAGATG
CTAACCATATGGGCATTGACATAGCAAACTTAACATCGAATCCAGCCAAG
AGTCTCGACAGCTCTGGTATTGATCTCAAAAGTGGAAGACCGATCCAGGT
TCACATTTATTACGATGGATGGACGAAAATACTCTATGTTTATGTGGCAT
ATGCGGGGAACCCACTTCAGAAGCTTATTGAAAGACCTATCCTCTTGTCA
GAAACAATTCCAAGCTCAGTCTATGTTGGCTTCACAGCATCCACAGGGCC
CGACTTTTCAGAAAGCCATCAGGTGCTTGATTGGACCTTCACACGTTCCC
ATTGCCTTCTTCTTCTCTGGAGGAGCAAAACCTGGCGA
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