CX295067

Overview
NameCX295067
Unique NameCX295067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29
Identity = 81/202 (40.10%), Postives = 101/202 (50.00%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRT--DTNR--EVAAFFAHVTHETTD-----------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            DAFI A NS+P FG T  DT R  E+AAFF   +HETT            +C++ + +++D               YYGRGPIQLT   NY  AG AIG + +N+P+ VA D  ISFKTA+WFWMT               +  SA +Q      G+G     ING  ECG    D V DR+  Y  YC    V PG  L+C
Sbjct:   57 DAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDR--------------YYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDC 244          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29
Identity = 82/203 (40.39%), Postives = 101/203 (49.75%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRT--DTNR--EVAAFFAHVTHETTD------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALN------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            DAFI A NS+P FG T  DT R  E+AAFF   +HETT             +C++ E N+              G  +YGRGPIQLTG  NY  AG+AIG D +N+P+ VA D  +SFKTA+WFWMT               +  SA +       G+G     ING  ECG     QV DR+  Y  YC    V PG  L+C
Sbjct:   49 DAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQM-------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDC 238          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.419e-29
Identity = 81/204 (39.71%), Postives = 101/204 (49.51%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRTDTN-----REVAAFFAHVTHETTD------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALN------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            DAFI A NS+P FG +  +     RE+AAFF   +HETT             +C+ EE NKA    TSP Y        YGRGPIQLTG  NY  AG A+G D + +P+ V+ D V+SFKTA+WFWMT               +  SA +       G+G     ING  ECG    D  +DR+  Y  YC   G   G  L+C
Sbjct:   62 DAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKA----TSPPY--------YGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.847e-27
Identity = 79/202 (39.11%), Postives = 98/202 (48.51%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRT--DTNR--EVAAFFAHVTHETTD-----------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            DAFI A NS+P FG +  DT R  E+AAFF   +HETT            +C++ + +++D               YYGRGPIQLT   NY  AG AI  D +N+P+ VA D  ISFKTA+WFWMT               +  SA +Q      G G     ING  ECG      V DR+  Y  YC    V PG  L+C
Sbjct:   57 DAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDR--------------YYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDC 244          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.982e-26
Identity = 79/203 (38.92%), Postives = 98/203 (48.28%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRT--DTNR--EVAAFFAHVTHETTD------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALN------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            DAFI A NS+P FG T  DT R  E+AAFF   +HETT             +C++ E N+              G  YYGRGPIQLTG  NY  AG+AI  D +N+P+ VA D  +SFKTA+WFWMT               +  SA +       G+G     ING  ECG     +V DR+  Y        V PG  L+C
Sbjct:   56 DAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQM-------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDC 245          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26
Identity = 77/198 (38.89%), Postives = 97/198 (48.99%), Query Frame = 3
Query:    6 AFITALNSYPEFGRT---DTN-REVAAFFAHVTHETTD------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMTY--------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            AF+ A  ++P F  T   DT  REVAAF A  +H T+       +CY E K      C  + ++PCA GK Y+ RGP+Q+  N NY  AG AIG D L +PE VA D  ++FKTALW WMT                       SA  +  G+G T   + G  +C G N     DRV  Y  YC   GV  GP L+C
Sbjct:  128 AFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDC 323          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26
Identity = 77/198 (38.89%), Postives = 97/198 (48.99%), Query Frame = 3
Query:    6 AFITALNSYPEFGRT---DTN-REVAAFFAHVTHETTD------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMTY--------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            AF+ A  ++P F  T   DT  REVAAF A  +H T+       +CY E K      C  + ++PCA GK Y+ RGP+Q+  N NY  AG AIG D L +PE VA D  ++FKTALW WMT                       SA  +  G+G T   + G  +C G N     DRV  Y  YC   GV  GP L+C
Sbjct:  128 AFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDC 323          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.592e-25
Identity = 74/205 (36.10%), Postives = 94/205 (45.85%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALNQ---------------GFGETIRKINGPAECG-GRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            DAFI A   +P FG T  +    RE+AAFF   +HETT              +C + E   +DP              YYGRGPIQLT   NY  AG A+G D +N+P+ V+ D V++F+TA+WFWMT        H  +                 G+G     ING  ECG G + D   DRV  Y  YC  F V  G  + C
Sbjct:   56 DAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDPP-------------YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 247          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.120e-24
Identity = 76/206 (36.89%), Postives = 95/206 (46.12%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWM---------------TYVHSALN------QGFGETIRKINGPAECG-GRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            +AFI+A   +P+FG T  +    RE+AAF    +HETT              +CY++E N   P+C  S  Y C  GK Y GRGPIQL+ N NY   G  +    L  PE V  D VISFKTA+WFWM                +  SA +       G+G     ING  ECG G       DR+  Y  YC   G   G  L+C
Sbjct:  119 NAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDC 323          
BLAST of CX295067 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.030e-23
Identity = 74/202 (36.63%), Postives = 96/202 (47.52%), Query Frame = 3
Query:    3 DAFITALNSYPEFGRT--DTNR--EVAAFFAHVTHETTD---------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGF--DGLNSPETVARDRVISFKTALWFWMTY-------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 500
            DAFI A NS+P FG T  DT R  E+AAFF   +HET           +C++ + +++D               YYGRGPIQLT   NY  AG+ IG   D +N+P+ VA D +ISF+TA+WFWMT                      +A N+  G+G     ING  EC       V  R+  Y  YC    V  G  L+C
Sbjct:   57 DAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDC 244          
The following BLAST results are available for this feature:
BLAST of CX295067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIQ_TOBAC2.881e-2940.10Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHIB_SOLLC2.881e-2940.39Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI8_ORYSJ6.419e-2939.71Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIP_TOBAC7.847e-2739.11Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIT_PETHY2.982e-2638.92Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI7_ORYSJ5.086e-2638.89Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI5.086e-2638.89Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI11_ORYSJ9.592e-2536.10Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI6_POPTR8.120e-2436.89Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHIA_SOLCI4.030e-2336.63Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]

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Properties
Property NameValue
Genbank descriptionC05068C02SK DroRLeaf1 Citrus clementina cDNA clone C05068C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295067 ID=CX295067; Name=CX295067; organism=Citrus clementina; type=EST; length=678bp
GAGATGCATTTATTACTGCTCTCAATTCGTATCCTGAATTTGGCAGAACT
GATACTAATCGTGAAGTGGCAGCATTTTTTGCCCATGTCACTCATGAAAC
AACAGATTTTTGCTACATAGAAGAGAAGAATAAAGCAGATCCTCATTGTA
CATCTCCACAATACCCATGTGCCAATGGTAAATTCTACTACGGCCGGGGA
CCGATTCAGCTCACCGGAAATGGAAACTACATAGACGCCGGAAGGGCCAT
CGGTTTCGACGGTCTGAACTCTCCGGAAACGGTAGCCAGGGACCGTGTCA
TATCTTTCAAGACCGCTTTGTGGTTTTGGATGACATACGTGCACTCAGCA
CTAAACCAAGGTTTTGGTGAAACAATTCGGAAAATTAATGGTCCTGCTGA
ATGCGGTGGCCGAAACCGTGACCAAGTTCTGGATCGTGTTAGGCGTTACA
CTGATTATTGCAAAAGATTTGGTGTTGATCCTGGACCACGTCTTGAATGC
TGAATAGATATTTTGTACAAAAAATATTACAGTATATGTATTATATTGTA
TCACAATAAGCCAGAGTTATTTCAAACAACTTTCTCTGTTTGGTAACTCT
GACGGAATAATTTTCTTGTACCTGATCATGAAATAAAGAGAAAAATAATG
GATAATTAAAAAAAAAAAAAAAAAAAAA
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