CX295079

Overview
NameCX295079
Unique NameCX295079
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.165e-34
Identity = 84/205 (40.98%), Postives = 112/205 (54.63%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRT-DT---NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSAL---------------NQGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            DAFI A  S+P FG T DT    +E+AAFF   +HETT              +C+ +E+N +  +C+ S ++PCA+GK YYGRGP+QL+ N NY   GRAIG D LN+P+ V+ D VI+FK A+WFWMT        H+ +                 G+G     ING  ECG     +V DR+  Y  YC   GV+PG  L+C
Sbjct:  101 DAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDC 305          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.746e-34
Identity = 84/204 (41.18%), Postives = 105/204 (51.47%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRT-DT---NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALNQ---------------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            DAFI A  +YP FG T DT    RE+AAF    +HETT              +C++ E+N +     +PQ+PCA G+ YYGRGPIQ++ N NY   GRAIG D LN P+ VA D VISFK+ALWFWMT        H  +                 G+G     ING  ECG     +V DR+  +  YC   GV  G  L+C
Sbjct:  105 DAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDC 308          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.963e-33
Identity = 84/204 (41.18%), Postives = 112/204 (54.90%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRT-DTN---REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            DAFI A  S+  FG T D N   +E+AAF A  +HETT              +C++ E+N  + +C+   +PCA GK YYGRGPIQLT N NY  AG+AI  D +N+P+ ++ +  +SFKTA+WFWMT               +  SA +       G+G     ING  ECG    ++V DRV  Y  YC+ FGVDPG  L+C
Sbjct:  110 DAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDC 313          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.348e-33
Identity = 83/204 (40.69%), Postives = 107/204 (52.45%), Query Frame = 1
Query:    7 DAFITALNSYPEF---GRTDTN-REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            DAF++A  ++P F   G T T  RE+AAF    +HETT              +C++ E+N +     S ++PCA+GK YYGRGPIQ++ N NY   GRAIG D LN+P+ VA D VISFKTALWFWMT        H  +                 G+G     ING  ECG     +V DR+  Y  YC  FG+  G  L+C
Sbjct:   98 DAFLSAAKAFPNFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDC 301          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.711e-33
Identity = 81/205 (39.51%), Postives = 106/205 (51.71%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            DAF+ A  S+P FG T +     RE+AAF    +HETT              +C+++E+N +  +C  SP+YPCA GK YYGRGP+QL+ N NY   G A+  + L +P+ VA DRV+SFKTALWFWMT        H  L                 G+G     +NG  ECG     QV DR+  +  YC   GV  G  L+C
Sbjct:   32 DAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDC 236          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.458e-33
Identity = 85/205 (41.46%), Postives = 112/205 (54.63%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRT-DTNR---EVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            +AFITA  S+  FG T DT R   EVAAFFA  +HETT              +CY+ E+     +C  S Q+PCA G+ YYGRGPIQ++ N NY   GRAIG + LN+P+ VA + V+SFK+A+WFWMT               +  SA ++      G+G     ING  ECG  +  +V DR+  Y  YC   GV PG  ++C
Sbjct:  115 NAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDC 319          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.741e-33
Identity = 81/205 (39.51%), Postives = 107/205 (52.20%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            +AF+ A  ++P FG T       REVAAF    +HETT              +C+ +E+N    +C  SP++PCA G+ YYGRGPIQL+ N NY  AGRAIG D L++P+ VA D  +SFKTALWFWMT        H  +                 G+G     +NG  ECG    D+V +R+  Y  YC  FG+  G  L+C
Sbjct:  119 EAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDC 323          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.272e-32
Identity = 86/205 (41.95%), Postives = 106/205 (51.71%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRT-DTN---REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            DAFI A  ++P FG T DT    RE+AAF A  +HETT              +CY+ E+     +C  S Q+PCA G+ YYGRGPIQ++ N NY  AG+AIG D +N+P+ VA D VISFKTA WFWMT        H+ +                 GFG     ING  ECG     QV DR+  Y  YC    V  G  L+C
Sbjct:   95 DAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDC 299          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.272e-32
Identity = 84/205 (40.98%), Postives = 106/205 (51.71%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRTDT----NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            DAF+ A  ++P FG T +     REVAAF A  +HETT              +C+ +E+  +  +CT S Q+PCA GK YYGRGPIQL+ N NY  AGRAIG D L +P+ VA D  + FKTA+WFWMT        H+ +                 GFG     ING  ECG     +V DR+  Y  YC   GV  G  L+C
Sbjct:   55 DAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 259          
BLAST of CX295079 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.662e-32
Identity = 84/205 (40.98%), Postives = 109/205 (53.17%), Query Frame = 1
Query:    7 DAFITALNSYPEFGRT-DTN---REVAAFFAHVTHETTD-------------FCYIEEKNKADPHC-TSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 504
            +AFITA  ++  FG T DTN   +E+AAF A  +HETT              +CY  E+     +C +S Q+PCA GK Y+GRGPIQ++ N NY  AG AIG + LN+P+ VA D V+SFKTALWFWMT        H  +                 GFG     ING  EC   +   + +R+  Y  YC+  GVDPG  L+C
Sbjct:   35 EAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDC 239          
The following BLAST results are available for this feature:
BLAST of CX295079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI2_BRANA5.165e-3440.98Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHI5_PHAVU6.746e-3441.18Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHIX_PEA1.963e-3341.18Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI2_PEA3.348e-3340.69Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHIT_CARPA5.711e-3339.51Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI3_TOBAC7.458e-3341.46Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI2_ORYSJ9.741e-3339.51Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_VITVI1.272e-3241.95Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHI2_HORVU1.272e-3240.9826 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHID_SOLLC1.662e-3240.98Basic endochitinase (Fragment) OS=Solanum lycopers... [more]

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Properties
Property NameValue
Genbank descriptionC05068D02SK DroRLeaf1 Citrus clementina cDNA clone C05068D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295079 ID=CX295079; Name=CX295079; organism=Citrus clementina; type=EST; length=681bp
GAGGGAGATGCATTTATTACTGCTCTCAATTCGTATCCTGAATTTGGCAG
AACTGATACTAATCGTGAAGTGGCAGCATTTTTTGCCCATGTCACTCATG
AAACAACAGATTTTTGCTACATAGAAGAGAAGAATAAAGCAGATCCTCAT
TGTACATCTCCACAATACCCATGTGCCAATGGTAAATTCTACTACGGCCG
GGGACCGATTCAGCTCACCGGAAATGGAAACTACATAGACGCCGGAAGGG
CCATCGGTTTCGACGGTCTGAACTCTCCGGAAACGGTAGCCAGGGACCGT
GTCATATCTTTCAAGACCGCTTTGTGGTTTTGGATGACATACGTGCACTC
AGCACTAAACCAAGGTTTTGGTGAAACAATTCGGAAAATTAATGGTCCTG
CTGAATGCGGTGGCCGAAACCGTGACCAAGTTCTGGATCGTGTTAGGCGT
TACACTGATTATTGCAAAAGATTTGGTGTTGATCCTGGACCACGTCTTGA
ATGCTGAATAGATATTTTGTACAAAAAATATTACAGTATATGTATTATAT
TGTATCACAATAAGCCAGAGTTATTTCAAACAACTTTCTCTGTTTGGTAA
CTCTGACGGAATAATTTTCTTGTACCTGATCATGAAATAAAGAGAAAAAT
AATGGATAATTAAAAAAAAAAAAAAAAAAAA
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