CX295084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.137e-34 Identity = 87/203 (42.86%), Postives = 110/203 (54.19%), Query Frame = 1 Query: 1 FITALNSYPAFGRT-DT---NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FITA S+P FG T DT +EVAAFF +HETT +C+ +E+N A +C S +PCA+GK YYGRGP+QL+ N NY GRAIG D LN+P+ VA D VI+FK A+WFWMT H+ + G+G ING ECG +V DR+ Y YC FGV+PG L+C Sbjct: 118 FITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDC 320
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.534e-34 Identity = 90/204 (44.12%), Postives = 109/204 (53.43%), Query Frame = 1 Query: 1 FITALNSYPAFGRT---DT-NREVAAFFAHVTHETTD-------------FCYIEEKN-KADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 F+ A N+YP F T DT REVAAF A +HETT +C+ EE N A +C P++PCA GK YYGRGPIQ+T N NY AG+AIG D LN+P+ VA D +SFKTA WFWMT + SA +Q G+GE ING ECG D+V DR+ Y YC GV G L+C Sbjct: 108 FVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDC 311
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.534e-34 Identity = 84/203 (41.38%), Postives = 109/203 (53.69%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDT----NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI+A S+P FG T RE+AAFFA +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D +ISFK+A+WFWMT + S +Q GFG ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 99 FISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 301
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.309e-34 Identity = 87/203 (42.86%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 FITALNSYPAFGRT-DTN---REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT-------------------YVHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A S+P FG + D N RE+AAFFA +HETT +C++ E+ +C S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALWFWMT A N+ GFG ING ECG ++V DR+ Y YC GV PG L+C Sbjct: 111 FINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDC 313
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.309e-34 Identity = 86/203 (42.36%), Postives = 106/203 (52.22%), Query Frame = 1 Query: 1 FITALNSYPAFGR----TDTNREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT-------------------YVHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A S+P FG T RE+AAFFA +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALWFWMT A N+ GFG ING ECG +V DR+ Y YC GV PG L+C Sbjct: 107 FINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 309
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.322e-34 Identity = 84/203 (41.38%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDT----NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 F+TA S+P FG T RE+AAF A +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+WFWMT + S +Q GFG ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 105 FVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDC 307
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 5.645e-34 Identity = 86/203 (42.36%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 FITALNSYPAFGR----TDTNREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A S+P FG T RE+AAFFA +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+ALWFWMT + SA ++ GFG ING ECG +V DR+ Y YC GV PG L+C Sbjct: 112 FINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDC 314
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.373e-34 Identity = 84/203 (41.38%), Postives = 108/203 (53.20%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDT----NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI+A S+P FG T RE+AAF A +HETT +C++ E+ +CT S Q+PCA G+ Y+GRGPIQ++ N NY GRAIG D LN+P+ VA D VISFK+A+WFWMT + S +Q GFG ING ECG + +V DR+ Y YC GV PG L+C Sbjct: 101 FISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDC 303
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.258e-33 Identity = 85/203 (41.87%), Postives = 106/203 (52.22%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 F+ A N++P FG T + R+VAAF A +HETT +C+ +E+ A +CT S Q+PCA GK YYGRGPIQL+ N NY AGRAIG D L +P+ VA D +SFKTALWFWMT H+ + GFG ING ECG +V DR+ Y YC GV G L+C Sbjct: 57 FVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILGVGYGDNLDC 259
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.659e-33 Identity = 82/203 (40.39%), Postives = 110/203 (54.19%), Query Frame = 1 Query: 1 FITALNSYPAFGRT-DT---NREVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSAL---------------NQGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A S+P FG T DT +E+AAFF +HETT +C+ +E+N + +C+ S ++PCA+GK YYGRGP+QL+ N NY GRAIG D LN+P+ V+ D VI+FK A+WFWMT H+ + G+G ING ECG +V DR+ Y YC GV+PG L+C Sbjct: 103 FINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDC 305 The following BLAST results are available for this feature:
BLAST of CX295084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295084 ID=CX295084; Name=CX295084; organism=Citrus clementina; type=EST; length=622bpback to top |