CX295084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.078e-28 Identity = 80/201 (39.80%), Postives = 99/201 (49.25%), Query Frame = 1 Query: 1 FITALNSYPAFGRT--DTNR--EVAAFFAHVTHETTD------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALN------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A NS+P FG T DT R E+AAFF +HETT +C++ E N+ G +YGRGPIQLTG NY AG+AIG D +N+P+ VA D +SFKTA+WFWMT + SA + G+G ING ECG QV DR+ Y YC V PG L+C Sbjct: 51 FIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQM-------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDC 238
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.078e-28 Identity = 79/202 (39.11%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 4 ITALNSYPAFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 +TA ++P F T + REVAAF +HETT +C+ EE +C S ++PCA K Y+GRGPIQL+ N NY AG AIG D LN+PE VA D V+SFKTALWFWMT H + G+G ING ECG D+V +R+ Y YC G+ G L+C Sbjct: 119 VTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDC 320
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.078e-28 Identity = 80/202 (39.60%), Postives = 100/202 (49.50%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDTN-----REVAAFFAHVTHETTD------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALN------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A NS+PAFG + + RE+AAFF +HETT +C+ EE NKA TSP Y YGRGPIQLTG NY AG A+G D + +P+ V+ D V+SFKTA+WFWMT + SA + G+G ING ECG D +DR+ Y YC G G L+C Sbjct: 64 FIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKA----TSPPY--------YGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDC 253
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.317e-26 Identity = 77/197 (39.09%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 1 FITALNSYPAFGRT---DTN-REVAAFFAHVTHETTD------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMTY--------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 F+ A ++PAF T DT REVAAF A +H T+ +CY E K C + ++PCA GK Y+ RGP+Q+ N NY AG AIG D L +PE VA D ++FKTALW WMT SA + G+G T + G +C G N DRV Y YC GV GP L+C Sbjct: 129 FVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDC 323
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.317e-26 Identity = 77/197 (39.09%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 1 FITALNSYPAFGRT---DTN-REVAAFFAHVTHETTD------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMTY--------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 F+ A ++PAF T DT REVAAF A +H T+ +CY E K C + ++PCA GK Y+ RGP+Q+ N NY AG AIG D L +PE VA D ++FKTALW WMT SA + G+G T + G +C G N DRV Y YC GV GP L+C Sbjct: 129 FVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDC 323
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.658e-26 Identity = 77/200 (38.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 1 FITALNSYPAFGRT--DTNR--EVAAFFAHVTHETTD-----------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALNQ------GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A NS+P FG + DT R E+AAFF +HETT +C++ + +++D YYGRGPIQLT NY AG AI D +N+P+ VA D ISFKTA+WFWMT + SA +Q G G ING ECG V DR+ Y YC V PG L+C Sbjct: 59 FIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDR--------------YYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNLDC 244
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.150e-25 Identity = 77/201 (38.31%), Postives = 96/201 (47.76%), Query Frame = 1 Query: 1 FITALNSYPAFGRT--DTNR--EVAAFFAHVTHETTD------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT---------------YVHSALN------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A NS+P FG T DT R E+AAFF +HETT +C++ E N+ G YYGRGPIQLTG NY AG+AI D +N+P+ VA D +SFKTA+WFWMT + SA + G+G ING ECG +V DR+ Y V PG L+C Sbjct: 58 FIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQM-------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNLDC 245
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.541e-23 Identity = 72/203 (35.47%), Postives = 92/203 (45.32%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALNQ---------------GFGETIRKINGPAECG-GRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A +P FG T + RE+AAFF +HETT +C + E +DP YYGRGPIQLT NY AG A+G D +N+P+ V+ D V++F+TA+WFWMT H + G+G ING ECG G + D DRV Y YC F V G + C Sbjct: 58 FIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDPP-------------YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIAC 247
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23 Identity = 75/204 (36.76%), Postives = 92/204 (45.10%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDTN----REVAAFFAHVTHETTD-------------FCYIEEKNKADPHCT-SPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWM---------------TYVHSALN------QGFGETIRKINGPAECG-GRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI+A +P FG T + RE+AAF +HETT +CY++E N P+C S Y C GK Y GRGPIQL+ N NY G + L PE V D VISFKTA+WFWM + SA + G+G ING ECG G DR+ Y YC G G L+C Sbjct: 121 FISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDC 323
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.906e-22 Identity = 72/200 (36.00%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 1 FITALNSYPAFGRT--DTNR--EVAAFFAHVTHETTD---------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGF--DGLNSPETVARDRVISFKTALWFWMTY-------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A NS+P FG T DT R E+AAFF +HET +C++ + +++D YYGRGPIQLT NY AG+ IG D +N+P+ VA D +ISF+TA+WFWMT +A N+ G+G ING EC V R+ Y YC V G L+C Sbjct: 59 FIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDC 244 The following BLAST results are available for this feature:
BLAST of CX295084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295084 ID=CX295084; Name=CX295084; organism=Citrus clementina; type=EST; length=622bpback to top |