CX295084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.455e-22 Identity = 69/200 (34.50%), Postives = 92/200 (46.00%), Query Frame = 1 Query: 1 FITALNSYPAFGR----TDTNREVAAFFAHVTHETTD---------FCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGF--DGLNSPETVARDRVISFKTALWFWMTY-------------------VHSALNQ--GFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI A NS+P FG T +E+AAFF +HET +C++++ ++D YYGRGPIQLT NY AG+ IG + +N+P+ VA D +ISFKTA+WFWMT +A N+ G+G ING ECG R+ Y YC V G L+C Sbjct: 59 FIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDR--------------YYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDC 244
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.455e-22 Identity = 69/206 (33.50%), Postives = 89/206 (43.20%), Query Frame = 1 Query: 1 FITALNSYPAFGRT---DTN-REVAAFFAHVTHETTD-------------FCYIEEKNKADPHC---TSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWM----------------------TYVHSALNQGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 + A YP FG T DT RE+AAFFA + ET+ +C + E N +C T YPC YYGRGP+QL N NY + G +G + L+ PE VA D V+SF+ ALWFWM + + GFG I EC + + +R+ Y YC VDPG L C Sbjct: 95 YFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLYC 298
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 5.480e-21 Identity = 58/130 (44.62%), Postives = 73/130 (56.15%), Query Frame = 1 Query: 1 FITALNSYPAFGR----TDTNREVAAFFAHVTHETTDFCYIEEKNKADPH-----------------CTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT 327 F+ A S+PAFG REVAAF AH++ T+ E + +PH CTS +PCA GK Y RGPIQLT N NY AG+AIG D + +P+ V +D +ISFKTALWFWM+ Sbjct: 160 FLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSG----ERSDVENPHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMS 285
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20 Identity = 66/174 (37.93%), Postives = 80/174 (45.98%), Query Frame = 1 Query: 1 FITALNSYPAF---GRTDTN-REVAAFFAHVTHETTDFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALN---------------QGFGETIRKINGPAECGGRNRDQVLDRVRRYTD 447 FI A S+PAF G TD REVAAF A +HETT P Y + Y+GRGPIQ++ N NY AG+AIG D L +P+ V D + FKTALWFWMT H + G+G I+G ECG V DR+ Y D Sbjct: 25 FIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTG---------GWPTAPDGPYELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKD 189
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: IAMY_COILA (Alpha-amylase inhibitor/endochitinase (Fragments) OS=Coix lachryma-jobi PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.595e-20 Identity = 61/139 (43.88%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 70 FAHVTHETTDFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMTYVHSALNQGFGETIRKINGPAECGGRNRDQVLDRVRRYTDYCKRFGVDPGPRL 486 FAHVTHET + Y DP T Q PCA GK YYGRGPIQ++ N NY AGRAIG DGL +P+ VA+D + +KTAL F +NG G + + V Y YC++ GVDPGP L Sbjct: 24 FAHVTHETGNNAY------CDPSKT--QKPCAAGKKYYGRGPIQISXNYNYGPAGRAIGMDGLGNPDRVAQDALDDYKTALXF------------------LVNGEEAVPGLS---AANAVSYYRQYCQQLGVDPGPNL 133
BLAST of CX295084 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12 Identity = 58/190 (30.53%), Postives = 76/190 (40.00%), Query Frame = 1 Query: 1 FITALNSYPAFGRTDTN----REVAAFFAHVTHETTDFCYIEEKNKADPHCTSPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWFWMT------YVHSALNQ---------------GFGETIRKINGPAECG-GRNRDQVLDRVRRYTDYCKRFGVDPGPRLEC 492 FI+A +P FG T + RE+AAF +HET + +P A G Y G + N NY G + L PE V D I+FKTALWFWMT H+ + + G+G ING ECG G + +R+ Y YC G G L+C Sbjct: 117 FISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGW-----------------WPAAQGD-QYDWGYCHM--NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDC 286 The following BLAST results are available for this feature:
BLAST of CX295084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295084 ID=CX295084; Name=CX295084; organism=Citrus clementina; type=EST; length=622bpback to top |