CX295085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44 Identity = 91/159 (57.23%), Postives = 117/159 (73.58%), Query Frame = 2 Query: 56 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEARSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 511 I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C H + + D+ + DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44 Identity = 91/159 (57.23%), Postives = 117/159 (73.58%), Query Frame = 2 Query: 56 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEARSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 511 I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C H + + D+ + DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.609e-44 Identity = 91/159 (57.23%), Postives = 117/159 (73.58%), Query Frame = 2 Query: 56 ITLKSSDGETFEVEETVALESQTIKHMVED-----DCADTVIPLPNVTSTILSKVIEYCKKHVEARSGDKKDDKSTE--DDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 511 I L+SSDGE FEV+ +A +S TIK M+ED + D +PLPNV + IL KVI++C H + + D+ + DD+ WD +F+KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MIKGKTPEEIRKTFNIKNDF+ +EE +VR+ENQW E Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: ASK19_ARATH (SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.040e-44 Identity = 98/189 (51.85%), Postives = 121/189 (64.02%), Query Frame = 2 Query: 44 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVE-----------ARSGDKK--------DD----KSTEDD---------LKTWDADFVK-VDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 511 S KKI L SSDGE+F+VEE VA + Q + H++EDDCA IP+PNVT IL+KVIEYCKKHVE + GDK DD +STE D L WDA F+K D T+FD+ILAANYLN++ L DL +T+AD IK TPEE+R+ FNI+NDF+P+EEE +R EN W FE Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEEAIRNENAWTFE 190
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: ASK5_ARATH (SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.371e-43 Identity = 91/159 (57.23%), Postives = 118/159 (74.21%), Query Frame = 2 Query: 53 KITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEARSGDKKDDKSTEDDLKTWDADFVKVDQNT-LFDLILAANYLNIKSLLDLTCQTV-----ADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 511 KI LKSSDG++FE++E VA +S I HMVED CA VIPL NVTS IL VI+YC+KHV+++ E+DLK WDADF+K + T LFD+++AANYLNI+SLLDLTC+TV AD++ GKTP+EIR FNI+ND + +E ++R ENQWAF+ Sbjct: 4 KIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCEKHVKSKE---------EEDLKEWDADFMKTIETTILFDVMMAANYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: ASK18_ARATH (SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 5.211e-43 Identity = 87/156 (55.77%), Postives = 113/156 (72.44%), Query Frame = 2 Query: 44 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEARSGDKKDDKSTEDDLKTWDADFV-KVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 508 S KI L SSDGE+FE++E VA + I HM+ED+CA IPL NVT ILSK+IEY K HV S ++ +D+ + +L +WDA F+ K+D T+F +ILAANYLN + LL QTVAD IK KTPEE+R+ FNI+NDF+P+EEEE+R+EN W F Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAKMHVNEPS-EEDEDEEAKKNLDSWDAKFMEKLDLETIFKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTF 156
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: ASK8_ARATH (SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.189e-41 Identity = 86/157 (54.78%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 44 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKH-VEARSGDKKDDKSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAFE 511 S KKI LKSS+G+TFE+EE A + QTI HM+E +C D VI + +TS IL VIEYC KH V+A + ++DDL+ WD +F++ D++T+F L AAN+LN KSLL L QTVADMIKG TP+++R+ FNI+ND +P+EE +RREN+WAFE Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCNKHHVDAAN------PCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAFE 152
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: ASK17_ARATH (SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.328e-38 Identity = 80/156 (51.28%), Postives = 108/156 (69.23%), Query Frame = 2 Query: 44 SEKKITLKSSDGETFEVEETVALESQTIKHMVEDDCADTVIPLPNVTSTILSKVIEYCKKHVEARSGDKKDDKSTEDDLKTWDADFVK-VDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWAF 508 S KKI L SSD E FE++E VA + Q + HM++DDCAD I L NVT IL+ +IEYCKKHV DD +++ TWDA+FVK +D +TLF L+ AA+YL + L +L Q +AD KT EIR+ FNI+ND++P+EEEE+R++N+WAF Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCKKHV--------DDVEAKNEFVTWDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAF 149
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: SKP1_SCHPO (Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe GN=skp1 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.592e-38 Identity = 83/158 (52.53%), Postives = 115/158 (72.78%), Query Frame = 2 Query: 53 KITLKSSDGETFEVEETVALESQTIKHMVEDDCADTV-IPLPNVTSTILSKVIEYCKKHV-EARSGDKKDD-----KSTEDDLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 505 KI L SSD E F V++ +A S IK+M+ED V IPLPNV+S +L KV+E+C+ H + SG +++ KST D+ WD F+ VDQ LF+++LA+NYL+IK LLD C+TVA+MI+GK+PE+IRKTFNI NDF+P+EEE++R+EN+WA Sbjct: 3 KIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKST--DIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
BLAST of CX295085 vs. ExPASy Swiss-Prot
Match: SKP1_YEAST (Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae GN=SKP1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.195e-33 Identity = 75/186 (40.32%), Postives = 111/186 (59.68%), Query Frame = 2 Query: 56 ITLKSSDGETFEVEETVALESQTIKHMVED-----------------------------------DCADTVIPLPNVTSTILSKVIEYCKKHVEARSGDKKDDKSTED-DLKTWDADFVKVDQNTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFSPDEEEEVRRENQWA 505 + L S +GE F V++ +A S +K+ + D D + V+P+PNV S++L KVIE+ + H ++ D+ DD S + + +WD +F+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G++PEEIR+TFNI NDF+P+EE +RREN+WA Sbjct: 6 VVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWA 191 The following BLAST results are available for this feature:
BLAST of CX295085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295085 ID=CX295085; Name=CX295085; organism=Citrus clementina; type=EST; length=728bpback to top |