CX295090

Overview
NameCX295090
Unique NameCX295090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_EMENI (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Emericella nidulans GN=tpsA PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.887e-40
Identity = 90/227 (39.65%), Postives = 136/227 (59.91%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIIS---RQGNEKLDKVLGSEPS 672
            +L  LL+ DLIGFHT+DY RHFLS CSR+LGL         G+E+ G+ ++    P+GI   + +  L     + +++ L ++F  QG  +++GVD +D  KG+  KL A+E  L  HPEW GKVVLVQ+A P+R   ++ + ++A     V RIN  FG   + P+  + + + F E IA Y V++ C+V++ RDGMNL+ YEYI +   R G+  L +  G+  S
Sbjct:  197 LLLGLLHCDLIGFHTYDYTRHFLSACSRLLGLPTTPN----GIEFQGKIIACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKF--QGVKLMVGVDRLDYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGKFGTVEFMPIHFLHKSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVLSEFAGAAQS 417          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_YEAST (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae GN=TPS1 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 8.660e-40
Identity = 89/230 (38.70%), Postives = 141/230 (61.30%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSM 690
            IL+ +L+ DL+GFHT+DYARHFLS   R+L +         G+EY GR V++   P+GI + +    L     + ++ +L + F  +G  +++GVD +D  KG+  KL AME  L +HPEW+GKVVLVQ+A P+RG  ++ + +++     V RIN  FG   + P+  + + + F E I+ Y V++ CLV++ RDGMNL+ YEYI  ++  EK   ++ SE +   +S+
Sbjct:  203 ILKGVLSCDLVGFHTYDYARHFLSSVQRVLNVNTLPN----GVEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETF--KGCKIIVGVDRLDYIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIACQE--EKKGSLILSEFTGAAQSL 424          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS2_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38
Identity = 85/215 (39.53%), Postives = 134/215 (62.33%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGL--TYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 639
            +LRA+L +DL+GFHT+D+ARHFLS C+R+LG+  T+E      G+ Y GR   + + P+GI   +      LP    +++EL ++F   GK ++LGVD +D+ KGI  K LA E+ L ++P W+ KVVLVQIA P R    + ++++++ +  V RIN  FG     P+  +D  + F    A Y +A+  LVT++RDGMNL+ YE++  ++  +
Sbjct:  199 LLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHE------GVVYQGRVTRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKF--AGKKVILGVDRLDMIKGIPQKYLAFEKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHLDCSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKK 405          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_ZYGRO (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Zygosaccharomyces rouxii GN=TPS1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.786e-38
Identity = 89/225 (39.56%), Postives = 135/225 (60.00%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR-QGNEKLDKVLGSEPS 672
            IL  +L+ DLIGFHT+DYARHFLS   R L +         G+EY GR V++   P+GI +   +  L     + ++  L ++F  +G  +++GVD +D  KG+  KL AME  L +HPEW GKVVLVQ+A P+RG  ++ + +++     V RIN  FG   + P+  + + + F E I+ Y V++ C+V++ RDGMNL+ YEYI  R +G+  L +  G+  S
Sbjct:  200 ILNGVLSCDLIGFHTYDYARHFLSSIQRCLNVNTLPN----GVEYQGRFVNVGAFPIGIDVDTFKEGLQKENVKQRIRTLQERF--KGCKIMVGVDRLDYIKGVPQKLHAMEVFLNEHPEWIGKVVLVQLAIPSRGDVEEYQYLRSVVNELVGRINGQFGTIEFVPIHFMHKSIPFEELISLYAVSDACIVSSTRDGMNLVSYEYIACRKKGSLILSEFTGAAQS 418          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_KLULA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Kluyveromyces lactis GN=TPS1 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37
Identity = 89/230 (38.70%), Postives = 136/230 (59.13%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSM 690
            IL+ +L+ DLIGFHT+DYARHFLS   R+L +         G+E+ GR V++   P+GI +      L       ++ EL + F  +G  +++GVD +D  KG+  KL A+E  L  HPEW GKVVLVQ+A P+RG  ++ + +++     V RIN  FG   + P+  +   + F E I+ Y V++ CLV++ RDGMNL+ YEYI  ++  EK   ++ SE +   +S+
Sbjct:  203 ILKGVLSCDLIGFHTYDYARHFLSAVQRILNVNTLPN----GVEFDGRFVNVGAFPIGIDVETFTEGLKQDAVIKRIKELKESF--KGCKIIIGVDRLDYIKGVPQKLHALEVFLGAHPEWIGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRINGQFGTAEFVPIHFMHRSIPFQELISLYAVSDVCLVSSTRDGMNLVSYEYISCQE--EKKGTLILSEFTGAAQSL 424          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_YARLI (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica GN=TPS1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.023e-37
Identity = 87/230 (37.83%), Postives = 134/230 (58.26%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGSEPSSPKKSM 690
            +L  +L+ +LIGFHT+DYARHFLS  SR+L L       Y    Y GR V +   P+GI + +       P  + ++++L  +F  +G  +++GVD +D  KG+  KL A E  L +HPEW GKVVLVQ+A P+RG  ++ + ++A     V RIN  FG   + P+  +   + F E IA Y +++ C V++ RDGMNL+ YEY+  +   EK   ++ SE +   +S+
Sbjct:  189 VLTGVLSCNLIGFHTYDYARHFLSSVSRILDLETMPNGTY----YKGRHVVVGAFPIGIDVNKFLEGCKRPAVQERIAQLQDKF--KGIKVVVGVDRLDYIKGVPQKLHAFEVFLSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRINGMFGTVEFTPIHFMHRSVDFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQ--TEKHGSLILSEFTGAAQSL 410          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_PICAN (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Pichia angusta GN=TPS1 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37
Identity = 85/227 (37.44%), Postives = 133/227 (58.59%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYII---SRQGNEKLDKVLGSEPS 672
            IL  +L+ DLIGFHT+DY RHFLS   R+L L    +    G+ Y  R V++   P+GI + +  + L     ++++ +L  +F    K +++GVD +D  KG+  KL A E  L +HPEW GKVVL+Q+A P+RG  ++ + ++A     V RIN  FG   + P+  + + + F E I+ Y  ++ C+V++ RDGMNL+ YEYI     R+G+  L +  G+  S
Sbjct:  194 ILEGVLSCDLIGFHTYDYVRHFLSSVERILKLRTSPQ----GVVYNDRQVTVSAYPIGIDVDKFLNGLKTDEVKSRIKQLETRFGKDCK-LIIGVDRLDYIKGVPQKLHAFEIFLERHPEWIGKVVLIQVAVPSRGDVEEYQSLRAAVNELVGRINGRFGTVEFVPIHFLHKSVNFQELISVYAASDVCVVSSTRDGMNLVSYEYIACQQDRKGSLVLSEFAGAAQS 415          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36
Identity = 81/213 (38.03%), Postives = 129/213 (60.56%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 639
            +LR++L +DL+GFHT+DYARHF+S C+R+LGL    +    G+E  GR   +   P+GI   +    L +P     + EL ++F   G+ ++LGVD +D+ KGI  K+LA E+ L ++  W+ KVVL+QIA P R    + +++ ++ +  V RIN  FG     P+  +D  L F+   A Y V +  LVT++RDGMNL+ YE++  ++  +
Sbjct:  279 LLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEAKK 485          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPSA_DICDI (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.996e-36
Identity = 80/212 (37.74%), Postives = 128/212 (60.38%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGN 636
            IL  +LN  LIGFHT+DYARHFL  C+R++GL         G+ +  R V + + PVGI   +    L     + ++ EL + F  +G  +L+G+D +D  KGI  KL A+E+L  ++PEW+GK+VL+Q+A P+R   ++ ++++ E    V RIN  +G  GY P+  + + +   E  A Y +++  L+T++RDGMNL+  EYI+ +  N
Sbjct:  195 ILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESF--EGTKVLIGIDRLDYIKGIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTEN 400          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_CANAL (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Candida albicans GN=TPS1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 82/210 (39.05%), Postives = 126/210 (60.00%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQ 630
            IL  +L+ DLIGFHT+DYARHF+S  SR++        G   ++Y GR++SI   P+GI +      L       ++ +L  +F D    +++GVD +D  KG+  KL A E  L ++PEW GKVVLVQ+A P+RG  ++ + +++     V RIN  FG   + P+  + + + F E I+ Y +++ CLV++ RDGMNL+ YEYI  +Q
Sbjct:  189 ILEGVLSCDLIGFHTYDYARHFISSVSRIVPNVSTLPNG---IKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKDVK--VIVGVDRLDYIKGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTVSELVGRINGEFGTVEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIACQQ 393          
The following BLAST results are available for this feature:
BLAST of CX295090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
TPS1_EMENI3.887e-4039.65Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS1_YEAST8.660e-4038.70Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS2_ARATH1.633e-3839.53Probable alpha,alpha-trehalose-phosphate synthase ... [more]
TPS1_ZYGRO2.786e-3839.56Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS1_KLULA1.383e-3738.70Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS1_YARLI4.023e-3737.83Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS1_PICAN6.862e-3737.44Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS1_ARATH1.529e-3638.03Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPSA_DICDI1.996e-3637.74Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPS1_CANAL2.607e-3639.05Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionC05068E02SK DroRLeaf1 Citrus clementina cDNA clone C05068E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295090 ID=CX295090; Name=CX295090; organism=Citrus clementina; type=EST; length=699bp
ATTCTGCGGGCCCTGTTGAATTCTGATTTAATTGGGTTCCATACTTTTGA
TTATGCACGGCATTTCTTGTCCTGCTGTAGTCGAATGCTAGGTCTTACCT
ATGAATCGAAGAGAGGTTACATAGGCCTTGAGTATTATGGTAGGACTGTT
AGTATCAAGATTCTTCCGGTGGGTATTCACATGGGTCAGCTTCAGTCAGT
TTTGAGTCTCCCTGGAACGGAGGCAAAGGTTTCTGAGCTCATTAAGCAGT
TCCATGATCAGGGTAAGGTGATGTTGCTTGGGGTAGATGATATGGACATA
TTTAAGGGCATAAGTTTGAAGCTGTTGGCCATGGAACAGTTACTCATTCA
ACACCCAGAGTGGCAGGGGAAGGTTGTACTGGTGCAGATAGCAAATCCTG
CTAGGGGCCGGGGAAAAGACGTGAAAGAAGTGCAGGCTGAGACATACTCG
ACTGTGGAGCGGATCAATCAAACTTTTGGGAAACCTGGATATGATCCCGT
TGTCTTGATTGATGAGCCACTTAAGTTTTATGAGAGAATTGCATATTATG
TGGTTGCAGAGTGTTGTTTGGTCACTGCAGTTAGAGATGGTATGAATCTC
ATACCATATGAATACATAATCAGCCGCCAAGGAAATGAGAAATTGGACAA
GGTTTTAGGTTCGGAGCCATCATCCCCAAAGAAGAGCATGTTGGTTGTT
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