CX295090

Overview
NameCX295090
Unique NameCX295090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCBP (Trehalose-phosphate synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=otsA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 67/216 (31.02%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY-------GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I++ LL +DL+GFH    A++FL    R++G   ++ RG +G+           RT+ +   P+ +  G L           +  E+  +  +  K+ LLGVD +D  KGI ++L A  +LL +    +   VLVQ+A P+R R +  + ++ +    V  IN  +G+ G+  V  +  P    E IA++V ++  LVT +RDGMNL+  EY+  R
Sbjct:  204 IIQGLLGADLVGFHLPGGAQNFLILSRRLVGT--DTSRGTVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKI-LLGVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVLVQLATPSRERVESYQTLRNDIERQVGHINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTPLRDGMNLVAKEYVACR 416          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCBO (Trehalose-phosphate synthase OS=Mycobacterium bovis GN=otsA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 67/216 (31.02%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY-------GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I++ LL +DL+GFH    A++FL    R++G   ++ RG +G+           RT+ +   P+ +  G L           +  E+  +  +  K+ LLGVD +D  KGI ++L A  +LL +    +   VLVQ+A P+R R +  + ++ +    V  IN  +G+ G+  V  +  P    E IA++V ++  LVT +RDGMNL+  EY+  R
Sbjct:  204 IIQGLLGADLVGFHLPGGAQNFLILSRRLVGT--DTSRGTVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKI-LLGVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVLVQLATPSRERVESYQTLRNDIERQVGHINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTPLRDGMNLVAKEYVACR 416          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCUA (Trehalose-phosphate synthase OS=Mycobacterium ulcerans (strain Agy99) GN=otsA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 67/216 (31.02%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY-------GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I++ LL +DL+GFH    A++FL    R++G   ++ RG +G+           RT+ +   P+ I  G L           +  E+  +  +  K+ LLGVD +D  KGI ++L A  +LL +    +   VLVQ+A P+R R +  + ++ +    V  IN  + + G+  V  +  P+   E IA++V ++  LVT +RDGMNL+  EY+  R
Sbjct:  200 IIQGLLGADLVGFHLPGGAQNFLILSRRLVGA--DTSRGTVGVRSRFGEVILGSRTIRVGAFPISIDSGALDQTARDRNIRRRSREIRAELGNPRKI-LLGVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVLVQLATPSRERVESYQTLRNDIERQVGHINGEYAEVGHPVVHYLHRPVPRNELIAFFVASDVMLVTPLRDGMNLVAKEYVACR 412          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCTU (Trehalose-phosphate synthase OS=Mycobacterium tuberculosis GN=otsA PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 66/216 (30.56%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY-------GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I++ LL +DL+GFH    A++FL    R++G   ++ RG +G+           RT+ +   P+ +  G L           +  E+  +  +  K+ LLGVD +D  KGI ++L A  +LL +    +   V+VQ+A P+R R +  + ++ +    V  IN  +G+ G+  V  +  P    E IA++V ++  LVT +RDGMNL+  EY+  R
Sbjct:  204 IIQGLLGADLVGFHLPGGAQNFLILSRRLVGT--DTSRGTVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKI-LLGVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVVVQLATPSRERVESYQTLRNDIERQVGHINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTPLRDGMNLVAKEYVACR 416          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCTA (Trehalose-phosphate synthase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=otsA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 66/216 (30.56%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY-------GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I++ LL +DL+GFH    A++FL    R++G   ++ RG +G+           RT+ +   P+ +  G L           +  E+  +  +  K+ LLGVD +D  KGI ++L A  +LL +    +   V+VQ+A P+R R +  + ++ +    V  IN  +G+ G+  V  +  P    E IA++V ++  LVT +RDGMNL+  EY+  R
Sbjct:  204 IIQGLLGADLVGFHLPGGAQNFLILSRRLVGT--DTSRGTVGVRSRFGAAVLGSRTIRVGAFPISVDSGALDHAARDRNIRRRAREIRTELGNPRKI-LLGVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVVVQLATPSRERVESYQTLRNDIERQVGHINGEYGEVGHPVVHYLHRPAPRDELIAFFVASDVMLVTPLRDGMNLVAKEYVACR 416          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCMM (Trehalose-phosphate synthase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=otsA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22
Identity = 67/216 (31.02%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYY-------GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I++ LL +DL+GFH    A++FL    R++G   ++ RG +G+           RT+ +   P+ I  G L           +  E+  +  +  K+ LLGVD +D  KGI ++L A  +LL +    +   VLVQ+A P+R R +  + ++ +    V  IN  + + G+  V  +  P+   E IA++V ++  LVT +RDGMNL+  EY+  R
Sbjct:  200 IIQGLLGADLVGFHLPGGAQNFLILSRRLVGA--DTSRGTVGVRSRFGEVILGSRTIRVGAFPISIDSGALDQTARDRNIRRRSREIRAELGNPRKI-LLGVDRLDYTKGIDVRLKAFSELLAEGRVKRDDTVLVQLATPSRERVESYQTLRNDIERQVGHINGEYAEVGHPVVHYLHRPVPRNELIAFFVASDVMLVTPLRDGMNLVAKEYVACR 412          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS2_YEAST (Trehalose-phosphatase OS=Saccharomyces cerevisiae GN=TPS2 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 68/218 (31.19%), Postives = 109/218 (50.00%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIG-----LEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGK-DVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYV------VAECCLVTAVRDGMNLIPYEYI 618
            IL  L+ ++ I F    ++RHF+S C R+L  T +  +         +  YG  V +  LP+G++  Q+         ++KV   IKQ + Q K +++G D +D  +G+  KL A E  L  +PEW+ +VVL+Q+++P   R       ++ +    V  IN  +G   + PV        +Y RI   V      VA+ CL+T+VRDGMN    EY+
Sbjct:  248 ILDGLVGANRICFQNESFSRHFVSSCKRLLDATAKKSKNSSNSDQYQVSVYGGDVLVDSLPIGVNTTQILKDAFTKDIDSKVLS-IKQAY-QNKKIIIGRDRLDSVRGVVQKLRAFETFLAMYPEWRDQVVLIQVSSPTANRNSPQTIRLEQQVNELVNSINSEYGNLNFSPV------QHYYMRIPKDVYLSLLRVADLCLITSVRDGMNTTALEYV 457          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCSJ (Trehalose-phosphate synthase OS=Mycobacterium sp. (strain JLS) GN=otsA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 70/216 (32.41%), Postives = 110/216 (50.93%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY-YG------RTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I+  LL +DL+GFH    A++FL    R+ G    + R  +G+   +G      RTV +   P+ I   +L S         +  E+  +  +  K+ LLGVD +D  KGI+++L A  +LL      +   VL+Q+A P+R R +    ++ +    V  IN  FG  G+  V  +  P+   E IA++V A+  LVT +RDGMNL+  EY+  R
Sbjct:  190 IIEGLLGADLVGFHLPGGAQNFLYLSRRLTGAN--TSRASVGVRSRFGEVQVGFRTVKVGAFPISIDSAELDSKARNRSVRQRAREIRNELGNPRKI-LLGVDRLDYTKGINVRLEAFSELLEDGRVDRNDTVLIQLATPSRERVESYIAMREDIERQVGHINGEFGDVGHPIVHYLHRPVPRDELIAFFVAADVMLVTPLRDGMNLVAKEYVACR 402          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCSS (Trehalose-phosphate synthase OS=Mycobacterium sp. (strain MCS) GN=otsA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 70/216 (32.41%), Postives = 109/216 (50.46%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY-YG------RTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I+  LL +DL+GFH    A++FL    R+ G    + R  +G+   +G      RTV +   P+ I   +L           +  E+  +  +  K+ LLGVD +D  KGI+++L A+ +LL          V VQ+A P+R R +   E++ +    V  IN  FG  G+  V  +  P+   E IA++V A+  LVT +RDGMNL+  EY+  R
Sbjct:  190 IIEGLLGADLVGFHLPGGAQNFLYLARRLTGAN--TSRATVGVRSRFGEVQVGFRTVKVGAFPISIDSDELDGKARNRAVRQRAREIRNELGNPRKI-LLGVDRLDYTKGINVRLEALSELLEDGRVDSHDTVFVQLATPSRERVQSYIEMREDIERQVGHINGEFGDVGHPIVHYLHRPIPRDELIAFFVAADVMLVTPLRDGMNLVAKEYVACR 402          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCSK (Trehalose-phosphate synthase OS=Mycobacterium sp. (strain KMS) GN=otsA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 70/216 (32.41%), Postives = 109/216 (50.46%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY-YG------RTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I+  LL +DL+GFH    A++FL    R+ G    + R  +G+   +G      RTV +   P+ I   +L           +  E+  +  +  K+ LLGVD +D  KGI+++L A+ +LL          V VQ+A P+R R +   E++ +    V  IN  FG  G+  V  +  P+   E IA++V A+  LVT +RDGMNL+  EY+  R
Sbjct:  190 IIEGLLGADLVGFHLPGGAQNFLYLARRLTGAN--TSRATVGVRSRFGEVQVGFRTVKVGAFPISIDSDELDGKARNRAVRQRAREIRNELGNPRKI-LLGVDRLDYTKGINVRLEALSELLEDGRVDSHDTVFVQLATPSRERVQSYIEMREDIERQVGHINGEFGDVGHPIVHYLHRPIPRDELIAFFVAADVMLVTPLRDGMNLVAKEYVACR 402          
The following BLAST results are available for this feature:
BLAST of CX295090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
OTSA_MYCBP2.799e-2231.02Trehalose-phosphate synthase OS=Mycobacterium bovi... [more]
OTSA_MYCBO2.799e-2231.02Trehalose-phosphate synthase OS=Mycobacterium bovi... [more]
OTSA_MYCUA6.235e-2231.02Trehalose-phosphate synthase OS=Mycobacterium ulce... [more]
OTSA_MYCTU6.235e-2230.56Trehalose-phosphate synthase OS=Mycobacterium tube... [more]
OTSA_MYCTA6.235e-2230.56Trehalose-phosphate synthase OS=Mycobacterium tube... [more]
OTSA_MYCMM6.235e-2231.02Trehalose-phosphate synthase OS=Mycobacterium mari... [more]
TPS2_YEAST1.389e-2131.19Trehalose-phosphatase OS=Saccharomyces cerevisiae ... [more]
OTSA_MYCSJ2.369e-2132.41Trehalose-phosphate synthase OS=Mycobacterium sp. ... [more]
OTSA_MYCSS3.094e-2132.41Trehalose-phosphate synthase OS=Mycobacterium sp. ... [more]
OTSA_MYCSK3.094e-2132.41Trehalose-phosphate synthase OS=Mycobacterium sp. ... [more]

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Properties
Property NameValue
Genbank descriptionC05068E02SK DroRLeaf1 Citrus clementina cDNA clone C05068E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295090 ID=CX295090; Name=CX295090; organism=Citrus clementina; type=EST; length=699bp
ATTCTGCGGGCCCTGTTGAATTCTGATTTAATTGGGTTCCATACTTTTGA
TTATGCACGGCATTTCTTGTCCTGCTGTAGTCGAATGCTAGGTCTTACCT
ATGAATCGAAGAGAGGTTACATAGGCCTTGAGTATTATGGTAGGACTGTT
AGTATCAAGATTCTTCCGGTGGGTATTCACATGGGTCAGCTTCAGTCAGT
TTTGAGTCTCCCTGGAACGGAGGCAAAGGTTTCTGAGCTCATTAAGCAGT
TCCATGATCAGGGTAAGGTGATGTTGCTTGGGGTAGATGATATGGACATA
TTTAAGGGCATAAGTTTGAAGCTGTTGGCCATGGAACAGTTACTCATTCA
ACACCCAGAGTGGCAGGGGAAGGTTGTACTGGTGCAGATAGCAAATCCTG
CTAGGGGCCGGGGAAAAGACGTGAAAGAAGTGCAGGCTGAGACATACTCG
ACTGTGGAGCGGATCAATCAAACTTTTGGGAAACCTGGATATGATCCCGT
TGTCTTGATTGATGAGCCACTTAAGTTTTATGAGAGAATTGCATATTATG
TGGTTGCAGAGTGTTGTTTGGTCACTGCAGTTAGAGATGGTATGAATCTC
ATACCATATGAATACATAATCAGCCGCCAAGGAAATGAGAAATTGGACAA
GGTTTTAGGTTCGGAGCCATCATCCCCAAAGAAGAGCATGTTGGTTGTT
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