CX295090

Overview
NameCX295090
Unique NameCX295090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_MYCS2 (Trehalose-phosphate synthase OS=Mycobacterium smegmatis GN=otsA PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21
Identity = 69/216 (31.94%), Postives = 112/216 (51.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEY-YG------RTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I+  LL +DL+GFH    A++FL    R++G    + R  IG+   +G      RTV +   P+ I   +L           +  ++  +  +  K+ML GVD +D  KGI ++L A+ +LL +    +   VLVQ+A P+R R +    ++ +    V  IN  +G+ G+  V  +  P+   E IA++V A+  LVT +RDGMNL+  EY+  R
Sbjct:  190 IVEGLLGADLVGFHLPGGAQNFLVLSRRLVGAN--TSRASIGVRSRFGEVQVGFRTVKVGAFPISIDSAELDGKARNRAIRQRARQIRAELGNPRKIML-GVDRLDYTKGIDVRLRALSELLEEKRIKRDDTVLVQLATPSRERVESYIAMREDIERQVGHINGEYGEVGHPIVHYLHRPIPRDELIAFFVAADVMLVTPLRDGMNLVAKEYVACR 402          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS3_YEAST (Trehalose synthase complex regulatory subunit TPS3 OS=Saccharomyces cerevisiae GN=TPS3 PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 69/209 (33.01%), Postives = 113/209 (54.07%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGY-DPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIIS 624
            IL  ++ ++ +GF T +Y RHFL  C+R+L     +      ++Y+   VS+   P+GI    L S L   G+  +  +LIK+   + K +++  D  D  +G+  K+LA E+ LI++PE+  KVVL+QI     G+  D  E + +    V+RIN          PVV + + L F + +A    A+  LV A+R+GMNL  +E+I+S
Sbjct:  488 ILEGIIGANFVGFQTKEYKRHFLQTCNRLLAADVSNDE----VKYHCNIVSVMYAPIGIDYYHLTSQLR-NGSVLEWRQLIKE-RWRNKKLIVCRDQFDRIRGLQKKMLAYERFLIENPEYIEKVVLIQI---CIGKSSD-PEYERQIMVVVDRINSLSSNISISQPVVFLHQDLDFAQYLALNCEADVFLVDALREGMNLTCHEFIVS 686          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS2_SCHPO (Trehalose-phosphatase OS=Schizosaccharomyces pombe GN=tps2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 71/213 (33.33%), Postives = 111/213 (52.11%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 639
            IL+ +L S++I   T  Y RHFLS CS +LGL  E+   +I     G  V +    V I + ++ S  +      K+ +L K  +   K +++G D +    G++ KL A  +LLI  P+W+G VVL+QI +   G     +E++ +T + V +IN  FG   Y PV+   + L   E  A   VA    V++VRD MN +  EY+  +Q N+
Sbjct:  267 ILKGVLASNVIAMQTDSYTRHFLSTCSNVLGL--ETTSTHIDTSD-GFRVVVFSSHVSIDVPRVYSRCNSKPVSLKIQQL-KSLYPSDKKLIVGRDQLTKACGVTHKLRAFRELLIHFPKWRGHVVLIQITSLPVGNNYSNEELK-KTENLVAQINSEFGSLDYTPVIHFHQLLDPDEYYALLSVANIACVSSVRDSMNTMALEYVACQQKNK 474          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPS1_ENCCU (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Encephalitozoon cuniculi GN=TPS1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21
Identity = 65/212 (30.66%), Postives = 105/212 (49.53%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGN 636
            I+  + +SDLI FH+FDYA +F   C R   +   SK              +  +P+GI     +S L    T  ++ EL + F  +G+ +LLGVD  D  KG+  ++   ++ L +HPE+   VV +Q+  P+R   K+      +    V   N  FG      +  +++ + F E  A Y V++  LVT+++DGMNL+  EYI  +  N
Sbjct:  183 IVSGMAHSDLIAFHSFDYAINFDDTC-RANKVEVRSK--------------LDAIPIGIDPAMFRSALKEEKTVERIKELREMF--RGRKILLGVDRTDYIKGMPHRVKGFQRFLEKHPEFLDNVVFLQVGVPSRTSVKEYSSYITKMNELVSETNSKFGSIESVHLYFLNKSVDFNELCALYAVSDMLLVTSLQDGMNLVALEYISCQNEN 377          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPSY_SCHPO (Putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 100 kDa subunit OS=Schizosaccharomyces pombe GN=SPAC22F8.05 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 70/212 (33.02%), Postives = 114/212 (53.77%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYD--PVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQ 630
            +L+ +L S+LIGF T +Y RHFL  CSR+  L  ES    I L+   R + +   P+G     +   L  P T  +V E++++ +    +  +G D MD  +GI  KLLA EQ L  +PE+Q   +L+Q +       ++ KE        V RIN  FG    D  PV ++   L + + +A   VA+  +VT++R+GM+L  +E+I++++
Sbjct:  335 LLQGMLGSNLIGFQTEEYKRHFLQSCSRV--LYAESTFDRILLD--DRYIDVYAHPIGADPVLVDKWLENPET-LEVKEVLEKRYANLNI-FVGCDKMDPIRGIREKLLAFEQFLYDNPEYQKNTILIQTSTFT----EEQKEYGVAISDIVTRINSAFGDFSLDHLPVTILSSDLSYPQYLALLSVADAFIVTSLREGMSLTCHEFILTQR 536          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: GGPS_PSEAG (Glucosylglycerol-phosphate synthase OS=Pseudomonas anguilliseptica GN=ggpS PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.622e-20
Identity = 68/228 (29.82%), Postives = 114/228 (50.00%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGY----------IGLEYY-------GRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQ--GKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            I+ +LL  D IGFH      +F+     ++ L   S++            +GLE          R V +   PVG+ + +++S L+ P    K+ E++++   +  G  ++L V+ +D  KGI  KL A E+LL ++PE  GKV LV +  PA        E+Q +    V RIN  F + G+ P+      L F E  A+Y +A+   +T +RDG+NL+  E++ ++
Sbjct:  440 IIGSLLQCDYIGFHIPRQVENFVDAARGVMPLQTVSRQNCAPRFITYGCAVGLERMTTAVDTGNRVVKLGAHPVGLDIERVRSALAAP----KIREMMERLRSELAGVKLILSVERLDYTKGILEKLNAYERLLEENPELLGKVTLVTVCVPAAKEMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFFRSLPFEEVSAWYAMADVMWITPLRDGLNLVAKEFVAAQ 663          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: GGPS_SYNY3 (Glucosylglycerol-phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=ggpS PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 63/231 (27.27%), Postives = 109/231 (47.19%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRM-----------------LGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLV-QIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNE 639
            I+ +LL  DL GFH   Y  +F++    +                  G           L Y  R +++   PVG +   ++++++    + KV+E+ +     GK +++    +D  KG    L+  E+LL + PE QG++ LV  +A  A G  +  +  Q E      +IN  F K  + PV+L   PL + E IA +  A+   +T +RDG+NL+  EY++++ G E
Sbjct:  189 IVESLLACDLCGFHIPRYVENFVAVARSLKPVEITRRVVVDQAFTPYGTALAEPELTTQLRYGDRLINLDAFPVGTNPANIRAIVAKESVQQKVAEIKQDLG--GKRLIVSAGRVDYVKGTKEMLMCYERLLERRPELQGEISLVVPVAKAAEGM-RIYRNAQNEIERLAGKINGRFAKLSWTPVMLFTSPLAYEELIALFCAADIAWITPLRDGLNLVAKEYVVAKNGEE 416          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: TPSX_SCHPO (Putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 106 kDa subunit OS=Schizosaccharomyces pombe GN=SPACUNK4.16c PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17
Identity = 53/208 (25.48%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGK--PGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYI 618
            IL+ +L ++++GF   ++A HFL  CSR++ +    K G +  E   R + +  LP+ I  G +   L+ P  E     L  +F  +GK ++L  D +D  +G+  KL++ E+ L ++PE++   +L+Q+A  +    + +  +       V RIN  +      + PV+L+ + L + + +A  ++++  +  ++R+G++L  +++I
Sbjct:  373 ILKGMLGANILGFQIPEFAYHFLQTCSRLVNIDIR-KNGVVSFE--NRQIDVIALPISIDPGFIDRCLASPPVEHWAKVLQDRF--RGKHIILSHDKLDPIRGLRSKLISFERFLQKYPEYRENTILLQVAPESLQDSEHLPHIS----DIVTRINSAYSNIASRHVPVILLRQKLGYAQFLALMMISDALIDNSLREGISLTSHQFI 571          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_SHISS (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Shigella sonnei (strain Ss046) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_SHIDS (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
The following BLAST results are available for this feature:
BLAST of CX295090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
OTSA_MYCS23.094e-2131.94Trehalose-phosphate synthase OS=Mycobacterium smeg... [more]
TPS3_YEAST4.041e-2133.01Trehalose synthase complex regulatory subunit TPS3... [more]
TPS2_SCHPO6.894e-2133.33Trehalose-phosphatase OS=Schizosaccharomyces pombe... [more]
TPS1_ENCCU9.003e-2130.66Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
TPSY_SCHPO2.620e-2033.02Putative alpha,alpha-trehalose-phosphate synthase ... [more]
GGPS_PSEAG7.622e-2029.82Glucosylglycerol-phosphate synthase OS=Pseudomonas... [more]
GGPS_SYNY32.218e-1927.27Glucosylglycerol-phosphate synthase OS=Synechocyst... [more]
TPSX_SCHPO2.711e-1725.48Putative alpha,alpha-trehalose-phosphate synthase ... [more]
OTSA_SHISS6.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_SHIDS6.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionC05068E02SK DroRLeaf1 Citrus clementina cDNA clone C05068E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295090 ID=CX295090; Name=CX295090; organism=Citrus clementina; type=EST; length=699bp
ATTCTGCGGGCCCTGTTGAATTCTGATTTAATTGGGTTCCATACTTTTGA
TTATGCACGGCATTTCTTGTCCTGCTGTAGTCGAATGCTAGGTCTTACCT
ATGAATCGAAGAGAGGTTACATAGGCCTTGAGTATTATGGTAGGACTGTT
AGTATCAAGATTCTTCCGGTGGGTATTCACATGGGTCAGCTTCAGTCAGT
TTTGAGTCTCCCTGGAACGGAGGCAAAGGTTTCTGAGCTCATTAAGCAGT
TCCATGATCAGGGTAAGGTGATGTTGCTTGGGGTAGATGATATGGACATA
TTTAAGGGCATAAGTTTGAAGCTGTTGGCCATGGAACAGTTACTCATTCA
ACACCCAGAGTGGCAGGGGAAGGTTGTACTGGTGCAGATAGCAAATCCTG
CTAGGGGCCGGGGAAAAGACGTGAAAGAAGTGCAGGCTGAGACATACTCG
ACTGTGGAGCGGATCAATCAAACTTTTGGGAAACCTGGATATGATCCCGT
TGTCTTGATTGATGAGCCACTTAAGTTTTATGAGAGAATTGCATATTATG
TGGTTGCAGAGTGTTGTTTGGTCACTGCAGTTAGAGATGGTATGAATCTC
ATACCATATGAATACATAATCAGCCGCCAAGGAAATGAGAAATTGGACAA
GGTTTTAGGTTCGGAGCCATCATCCCCAAAGAAGAGCATGTTGGTTGTT
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