CX295090

Overview
NameCX295090
Unique NameCX295090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11232 contig Ccv1_Contig11232:555..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_PSESS (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Pseudomonas syringae pv. savastanoi GN=otsA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECOSM (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECOLI (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli (strain K12) GN=otsA PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECOLC (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECODH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli (strain K12 / DH10B) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECO57 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli O157:H7 GN=otsA PE=3 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECO24 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.039e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ENT38 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Enterobacter sp. (strain 638) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 56/211 (26.54%), Postives = 111/211 (52.61%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLS--LPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +  + FL   +    LT  + + +   + +G+T   ++ P+GI   ++ +  S  LP   A++   +K   +     +  V+ +D  KG+  +  A E+LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++  +    +  +  AE  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEGLCDYDLLGFQTENDRQAFLESVAGKTRLTTHNGKSH---QAWGKTFDTEVYPIGIEPDEIAADASGPLPPKLAQLKNELKNVKN-----IFSVERLDYSKGLPERFQAYERLLEKYPQHHGKIRYTQIAPTSRGEVQAYQDIRHQLETEAGRINGRYGQLGWTPLYYLNQHFERKVLMKVFRYAEVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECOHS (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli O9:H4 (strain HS) GN=otsA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 56/211 (26.54%), Postives = 109/211 (51.66%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +     +G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTA---WGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEVLLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
BLAST of CX295090 vs. ExPASy Swiss-Prot
Match: OTSA_ECOL6 (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Escherichia coli O6 GN=otsA PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.345e-16
Identity = 56/211 (26.54%), Postives = 108/211 (51.18%), Query Frame = 1
Query:    1 ILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQL--QSVLSLPGTEAKVSELIKQFHDQGKVMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETYSTVERINQTFGKPGYDPVVLIDEPLKFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISR 627
            +L  L + DL+GF T +    FL C S +  +T  S + +      G+    ++ P+GI   ++  Q+   LP   A++   +K   +     +  V+ +D  KG+  + LA E LL ++P+  GK+   QIA  +RG  +  ++++ +  +   RIN  +G+ G+ P+  +++       +  +  ++  LVT +RDGMNL+  EY+ ++
Sbjct:  173 LLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAC---GKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQN-----IFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQ 375          
The following BLAST results are available for this feature:
BLAST of CX295090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
OTSA_PSESS6.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECOSM6.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECOLI6.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECOLC6.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECODH6.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECO576.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECO246.039e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ENT387.887e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECOHS7.887e-1726.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]
OTSA_ECOL61.345e-1626.54Alpha,alpha-trehalose-phosphate synthase [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionC05068E02SK DroRLeaf1 Citrus clementina cDNA clone C05068E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295090 ID=CX295090; Name=CX295090; organism=Citrus clementina; type=EST; length=699bp
ATTCTGCGGGCCCTGTTGAATTCTGATTTAATTGGGTTCCATACTTTTGA
TTATGCACGGCATTTCTTGTCCTGCTGTAGTCGAATGCTAGGTCTTACCT
ATGAATCGAAGAGAGGTTACATAGGCCTTGAGTATTATGGTAGGACTGTT
AGTATCAAGATTCTTCCGGTGGGTATTCACATGGGTCAGCTTCAGTCAGT
TTTGAGTCTCCCTGGAACGGAGGCAAAGGTTTCTGAGCTCATTAAGCAGT
TCCATGATCAGGGTAAGGTGATGTTGCTTGGGGTAGATGATATGGACATA
TTTAAGGGCATAAGTTTGAAGCTGTTGGCCATGGAACAGTTACTCATTCA
ACACCCAGAGTGGCAGGGGAAGGTTGTACTGGTGCAGATAGCAAATCCTG
CTAGGGGCCGGGGAAAAGACGTGAAAGAAGTGCAGGCTGAGACATACTCG
ACTGTGGAGCGGATCAATCAAACTTTTGGGAAACCTGGATATGATCCCGT
TGTCTTGATTGATGAGCCACTTAAGTTTTATGAGAGAATTGCATATTATG
TGGTTGCAGAGTGTTGTTTGGTCACTGCAGTTAGAGATGGTATGAATCTC
ATACCATATGAATACATAATCAGCCGCCAAGGAAATGAGAAATTGGACAA
GGTTTTAGGTTCGGAGCCATCATCCCCAAAGAAGAGCATGTTGGTTGTT
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